Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetMORI_IMMATURE_B_LYMPHOCYTE_DN
Enrichment Score (ES)-0.82005155
Normalized Enrichment Score (NES)-1.688128
Nominal p-value0.0
FDR q-value0.0011744855
FWER p-Value0.018
Table: GSEA Results Summary



Fig 1: Enrichment plot: MORI_IMMATURE_B_LYMPHOCYTE_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CDKN1Acyclin dependent kinase inhibitor 1A [Source:HGNC Symbol;Acc:HGNC:1784]15521.761-0.0338No
2TXNthioredoxin [Source:HGNC Symbol;Acc:HGNC:12435]21531.328-0.0439No
3HNRNPABheterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:HGNC:5034]33640.733-0.0733No
4MTHFD2methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase [Source:HGNC Symbol;Acc:HGNC:7434]33770.727-0.0702No
5DCKdeoxycytidine kinase [Source:HGNC Symbol;Acc:HGNC:2704]37980.562-0.0790No
6CBX1chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551]48480.333-0.1058No
7PREPprolyl endopeptidase [Source:HGNC Symbol;Acc:HGNC:9358]51340.234-0.1124No
8SLBPstem-loop binding protein [Source:HGNC Symbol;Acc:HGNC:10904]56760.088-0.1266No
9RAG1recombination activating 1 [Source:HGNC Symbol;Acc:HGNC:9831]123410.000-0.3067No
10CDCA5cell division cycle associated 5 [Source:HGNC Symbol;Acc:HGNC:14626]166630.000-0.4235No
11IGLL1immunoglobulin lambda like polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:5870]184440.000-0.4716No
12CENPAcentromere protein A [Source:HGNC Symbol;Acc:HGNC:1851]210140.000-0.5411No
13ENPEPglutamyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:3355]242440.000-0.6283No
14RAMP1receptor activity modifying protein 1 [Source:HGNC Symbol;Acc:HGNC:9843]250440.000-0.6499No
15SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]28164-0.014-0.7342No
16HMGN2high mobility group nucleosomal binding domain 2 [Source:HGNC Symbol;Acc:HGNC:4986]28663-0.147-0.7470No
17HAUS3HAUS augmin like complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:28719]29927-0.477-0.7789No
18ANP32Eacidic nuclear phosphoprotein 32 family member E [Source:HGNC Symbol;Acc:HGNC:16673]30436-0.597-0.7899No
19SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]30659-0.672-0.7928No
20ACTN4actinin alpha 4 [Source:HGNC Symbol;Acc:HGNC:166]31041-0.783-0.7995No
21PRDX4peroxiredoxin 4 [Source:HGNC Symbol;Acc:HGNC:17169]31333-0.870-0.8033No
22UCK2uridine-cytidine kinase 2 [Source:HGNC Symbol;Acc:HGNC:12562]31782-1.019-0.8107No
23HNRNPA3heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]32128-1.148-0.8148Yes
24PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]32234-1.194-0.8121Yes
25LGALS1galectin 1 [Source:HGNC Symbol;Acc:HGNC:6561]32308-1.226-0.8084Yes
26PCK2phosphoenolpyruvate carboxykinase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:8725]32634-1.286-0.8113Yes
27RBBP4RB binding protein 4, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:9887]32686-1.314-0.8066Yes
28HJURPHolliday junction recognition protein [Source:HGNC Symbol;Acc:HGNC:25444]32737-1.335-0.8018Yes
29CDC45cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]32822-1.363-0.7978Yes
30XRCC6X-ray repair cross complementing 6 [Source:HGNC Symbol;Acc:HGNC:4055]33004-1.453-0.7960Yes
31SLC16A1solute carrier family 16 member 1 [Source:HGNC Symbol;Acc:HGNC:10922]33206-1.537-0.7943Yes
32LMNB1lamin B1 [Source:HGNC Symbol;Acc:HGNC:6637]33291-1.571-0.7894Yes
33CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]33303-1.578-0.7824Yes
34HMGB1high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]33349-1.593-0.7763Yes
35TUBB4Btubulin beta 4B class IVb [Source:HGNC Symbol;Acc:HGNC:20771]33365-1.603-0.7693Yes
36KPNA2karyopherin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6395]33683-1.743-0.7698Yes
37CKAP5cytoskeleton associated protein 5 [Source:HGNC Symbol;Acc:HGNC:28959]34140-1.987-0.7730Yes
38HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]34287-2.069-0.7674Yes
39CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]34580-2.221-0.7650Yes
40H2AC4H2A clustered histone 4 [Source:HGNC Symbol;Acc:HGNC:4734]34680-2.278-0.7572Yes
41MCM10minichromosome maintenance 10 replication initiation factor [Source:HGNC Symbol;Acc:HGNC:18043]34813-2.360-0.7499Yes
42RAD51RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:9817]34863-2.398-0.7402Yes
43TUBA1Atubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]34888-2.411-0.7297Yes
44PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35069-2.538-0.7229Yes
45TUBA1Btubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]35072-2.540-0.7112Yes
46SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35087-2.553-0.6999Yes
47MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]35150-2.598-0.6896Yes
48RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35160-2.606-0.6778Yes
49CENPLcentromere protein L [Source:HGNC Symbol;Acc:HGNC:17879]35293-2.681-0.6690Yes
50EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]35361-2.726-0.6583Yes
51SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]35393-2.750-0.6464Yes
52TUBBtubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]35477-2.816-0.6357Yes
53CHEK1checkpoint kinase 1 [Source:HGNC Symbol;Acc:HGNC:1925]35483-2.821-0.6228Yes
54DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35546-2.882-0.6112Yes
55MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]35740-3.078-0.6022Yes
56MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]35783-3.122-0.5890Yes
57UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]35837-3.176-0.5758Yes
58IQGAP3IQ motif containing GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:20669]35851-3.186-0.5615Yes
59RAD54LRAD54 like [Source:HGNC Symbol;Acc:HGNC:9826]36017-3.355-0.5505Yes
60CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]36019-3.358-0.5350Yes
61MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36039-3.372-0.5200Yes
62GSNgelsolin [Source:HGNC Symbol;Acc:HGNC:4620]36048-3.379-0.5046Yes
63TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36054-3.383-0.4892Yes
64CDCA7cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]36057-3.385-0.4736Yes
65KIFC1kinesin family member C1 [Source:HGNC Symbol;Acc:HGNC:6389]36060-3.389-0.4581Yes
66DTLdenticleless E3 ubiquitin protein ligase homolog [Source:HGNC Symbol;Acc:HGNC:30288]36080-3.411-0.4429Yes
67TMPOthymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]36086-3.421-0.4272Yes
68STMN1stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]36157-3.491-0.4130Yes
69LIG1DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]36371-3.711-0.4017Yes
70SLC29A1solute carrier family 29 member 1 (Augustine blood group) [Source:HGNC Symbol;Acc:HGNC:11003]36379-3.721-0.3847Yes
71CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]36393-3.744-0.3678Yes
72CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]36488-3.857-0.3526Yes
73NEK2NIMA related kinase 2 [Source:HGNC Symbol;Acc:HGNC:7745]36508-3.891-0.3352Yes
74NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36519-3.907-0.3174Yes
75PTGR1prostaglandin reductase 1 [Source:HGNC Symbol;Acc:HGNC:18429]36537-3.921-0.2998Yes
76DNMT1DNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:2976]36553-3.943-0.2821Yes
77NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36576-3.975-0.2643Yes
78PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36590-3.998-0.2463Yes
79H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36591-3.999-0.2278Yes
80CDKN2Ccyclin dependent kinase inhibitor 2C [Source:HGNC Symbol;Acc:HGNC:1789]36685-4.099-0.2115Yes
81CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36709-4.137-0.1930Yes
82H2AZ2H2A.Z variant histone 2 [Source:HGNC Symbol;Acc:HGNC:20664]36713-4.143-0.1740Yes
83RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36786-4.241-0.1564Yes
84MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36795-4.256-0.1370Yes
85HMGB3high mobility group box 3 [Source:HGNC Symbol;Acc:HGNC:5004]36819-4.299-0.1178Yes
86CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36838-4.351-0.0982Yes
87NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36851-4.372-0.0784Yes
88E2F8E2F transcription factor 8 [Source:HGNC Symbol;Acc:HGNC:24727]36887-4.439-0.0589Yes
89CDCA3cell division cycle associated 3 [Source:HGNC Symbol;Acc:HGNC:14624]36915-4.481-0.0390Yes
90TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]36941-4.548-0.0187Yes
91MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]37062-4.9280.0008Yes
Table: GSEA details [plain text format]



Fig 2: MORI_IMMATURE_B_LYMPHOCYTE_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: MORI_IMMATURE_B_LYMPHOCYTE_DN: Random ES distribution   
Gene set null distribution of ES for MORI_IMMATURE_B_LYMPHOCYTE_DN