Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetODONNELL_TFRC_TARGETS_DN
Enrichment Score (ES)-0.78177375
Normalized Enrichment Score (NES)-1.663621
Nominal p-value0.0
FDR q-value0.002117537
FWER p-Value0.048
Table: GSEA Results Summary



Fig 1: Enrichment plot: ODONNELL_TFRC_TARGETS_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PCBP1-AS1PCBP1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:42948]1144.5500.0124No
2FAPfibroblast activation protein alpha [Source:HGNC Symbol;Acc:HGNC:3590]1914.1630.0245No
3DCP2decapping mRNA 2 [Source:HGNC Symbol;Acc:HGNC:24452]8612.5350.0150No
4HSPH1heat shock protein family H (Hsp110) member 1 [Source:HGNC Symbol;Acc:HGNC:16969]11402.1100.0146No
5KBTBD8kelch repeat and BTB domain containing 8 [Source:HGNC Symbol;Acc:HGNC:30691]12862.0560.0177No
6ASNSasparagine synthetase (glutamine-hydrolyzing) [Source:HGNC Symbol;Acc:HGNC:753]15351.7850.0170No
7TOX4TOX high mobility group box family member 4 [Source:HGNC Symbol;Acc:HGNC:20161]15911.7230.0214No
8TFRCtransferrin receptor [Source:HGNC Symbol;Acc:HGNC:11763]16181.7030.0265No
9H3C7H3 clustered histone 7 [Source:HGNC Symbol;Acc:HGNC:4773]19501.4460.0224No
10MEX3Cmex-3 RNA binding family member C [Source:HGNC Symbol;Acc:HGNC:28040]19941.4370.0262No
11ZBTB6zinc finger and BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16764]22601.2670.0233No
12FUSFUS RNA binding protein [Source:HGNC Symbol;Acc:HGNC:4010]25261.1250.0199No
13RANBP1RAN binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9847]30980.8390.0073No
14LRRC58leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]35900.644-0.0038No
15SETMARSET domain and mariner transposase fusion gene [Source:HGNC Symbol;Acc:HGNC:10762]42980.473-0.0213No
16TNRC6Atrinucleotide repeat containing adaptor 6A [Source:HGNC Symbol;Acc:HGNC:11969]44220.465-0.0230No
17CFL2cofilin 2 [Source:HGNC Symbol;Acc:HGNC:1875]50710.253-0.0397No
18BPTFbromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]54370.148-0.0491No
19LIN28Blin-28 homolog B [Source:HGNC Symbol;Acc:HGNC:32207]62060.000-0.0699No
20USP29ubiquitin specific peptidase 29 [Source:HGNC Symbol;Acc:HGNC:18563]62570.000-0.0712No
21FGF22fibroblast growth factor 22 [Source:HGNC Symbol;Acc:HGNC:3679]65610.000-0.0794No
22VSNL1visinin like 1 [Source:HGNC Symbol;Acc:HGNC:12722]71660.000-0.0958No
23SMYD3-IT1SMYD3 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41406]72520.000-0.0981No
24LINC01010long intergenic non-protein coding RNA 1010 [Source:HGNC Symbol;Acc:HGNC:48978]77530.000-0.1116No
25DLEU2deleted in lymphocytic leukemia 2 [Source:HGNC Symbol;Acc:HGNC:13748]79530.000-0.1170No
26SIX3SIX homeobox 3 [Source:HGNC Symbol;Acc:HGNC:10889]81380.000-0.1220No
27TBC1D8-AS1TBC1D8 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:52782]84630.000-0.1307No
28CASP14caspase 14 [Source:HGNC Symbol;Acc:HGNC:1502]88990.000-0.1425No
29KCNA1potassium voltage-gated channel subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:6218]94220.000-0.1566No
30FBXL21PF-box and leucine rich repeat protein 21, pseudogene [Source:HGNC Symbol;Acc:HGNC:13600]97180.000-0.1646No
31RTP1receptor transporter protein 1 [Source:HGNC Symbol;Acc:HGNC:28580]102590.000-0.1792No
32FAM181Bfamily with sequence similarity 181 member B [Source:HGNC Symbol;Acc:HGNC:28512]104990.000-0.1857No
33PRKCQ-AS1PRKCQ antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44689]107070.000-0.1913No
34H4C12H4 clustered histone 12 [Source:HGNC Symbol;Acc:HGNC:4784]124780.000-0.2392No
35TP63tumor protein p63 [Source:HGNC Symbol;Acc:HGNC:15979]152600.000-0.3145No
36TCEAL3transcription elongation factor A like 3 [Source:HGNC Symbol;Acc:HGNC:28247]158760.000-0.3311No
37FETUBfetuin B [Source:HGNC Symbol;Acc:HGNC:3658]169250.000-0.3595No
38SLC12A1solute carrier family 12 member 1 [Source:HGNC Symbol;Acc:HGNC:10910]175450.000-0.3762No
39ITPRID1ITPR interacting domain containing 1 [Source:HGNC Symbol;Acc:HGNC:27363]176890.000-0.3801No
40CENPAcentromere protein A [Source:HGNC Symbol;Acc:HGNC:1851]210140.000-0.4700No
41CPNE6copine 6 [Source:HGNC Symbol;Acc:HGNC:2319]211570.000-0.4739No
42XAGE3X antigen family member 3 [Source:HGNC Symbol;Acc:HGNC:14618]217550.000-0.4900No
43CYTORcytoskeleton regulator RNA [Source:HGNC Symbol;Acc:HGNC:28717]222450.000-0.5033No
44CCDC148coiled-coil domain containing 148 [Source:HGNC Symbol;Acc:HGNC:25191]230180.000-0.5242No
45TTC9Btetratricopeptide repeat domain 9B [Source:HGNC Symbol;Acc:HGNC:26395]231590.000-0.5280No
46DSCAMDS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]246140.000-0.5673No
47MIR3939microRNA 3939 [Source:HGNC Symbol;Acc:HGNC:38931]256570.000-0.5955No
48KRT35keratin 35 [Source:HGNC Symbol;Acc:HGNC:6453]267830.000-0.6259No
49SNORD17small nucleolar RNA, C/D box 17 [Source:HGNC Symbol;Acc:HGNC:32713]271670.000-0.6363No
50FAM72Cfamily with sequence similarity 72 member C [Source:HGNC Symbol;Acc:HGNC:30602]272280.000-0.6379No
51SNORD93small nucleolar RNA, C/D box 93 [Source:HGNC Symbol;Acc:HGNC:32755]272590.000-0.6387No
52TSBP1testis expressed basic protein 1 [Source:HGNC Symbol;Acc:HGNC:13922]275110.000-0.6455No
53NPNTnephronectin [Source:HGNC Symbol;Acc:HGNC:27405]28755-0.171-0.6786No
54B4GALNT3beta-1,4-N-acetyl-galactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:24137]28757-0.171-0.6780No
55SAMM50SAMM50 sorting and assembly machinery component [Source:HGNC Symbol;Acc:HGNC:24276]29138-0.265-0.6874No
56GNAQG protein subunit alpha q [Source:HGNC Symbol;Acc:HGNC:4390]29746-0.428-0.7024No
57TUBD1tubulin delta 1 [Source:HGNC Symbol;Acc:HGNC:16811]29799-0.442-0.7023No
58RAD1RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]30037-0.509-0.7070No
59FKBP5FKBP prolyl isomerase 5 [Source:HGNC Symbol;Acc:HGNC:3721]30632-0.661-0.7208No
60ANKRD50ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]30791-0.708-0.7227No
61NRTNneurturin [Source:HGNC Symbol;Acc:HGNC:8007]30885-0.735-0.7227No
62MON2MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:HGNC Symbol;Acc:HGNC:29177]31344-0.874-0.7321No
63BRCA2BRCA2 DNA repair associated [Source:HGNC Symbol;Acc:HGNC:1101]32235-1.194-0.7522No
64NUP50nucleoporin 50 [Source:HGNC Symbol;Acc:HGNC:8065]32509-1.233-0.7554No
65TAF5TATA-box binding protein associated factor 5 [Source:HGNC Symbol;Acc:HGNC:11539]32996-1.448-0.7636No
66CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]33303-1.578-0.7665No
67ACACAacetyl-CoA carboxylase alpha [Source:HGNC Symbol;Acc:HGNC:84]33356-1.596-0.7625No
68NSD2nuclear receptor binding SET domain protein 2 [Source:HGNC Symbol;Acc:HGNC:12766]33740-1.773-0.7668No
69RIF1replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]33871-1.849-0.7641No
70CD151CD151 molecule (Raph blood group) [Source:HGNC Symbol;Acc:HGNC:1630]34526-2.181-0.7744Yes
71MND1meiotic nuclear divisions 1 [Source:HGNC Symbol;Acc:HGNC:24839]34529-2.183-0.7670Yes
72CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]34580-2.221-0.7608Yes
73SURF1SURF1 cytochrome c oxidase assembly factor [Source:HGNC Symbol;Acc:HGNC:11474]34709-2.294-0.7565Yes
74DIAPH3diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]34754-2.318-0.7498Yes
75PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]34858-2.395-0.7444Yes
76DBF4DBF4 zinc finger [Source:HGNC Symbol;Acc:HGNC:17364]34861-2.396-0.7364Yes
77HELLShelicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]35015-2.498-0.7320Yes
78ZFAND4zinc finger AN1-type containing 4 [Source:HGNC Symbol;Acc:HGNC:23504]35108-2.565-0.7258Yes
79TADA2Atranscriptional adaptor 2A [Source:HGNC Symbol;Acc:HGNC:11531]35203-2.654-0.7193Yes
80ACVR2Bactivin A receptor type 2B [Source:HGNC Symbol;Acc:HGNC:174]35285-2.679-0.7124Yes
81GALTgalactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]35488-2.825-0.7083Yes
82ERCC6LERCC excision repair 6 like, spindle assembly checkpoint helicase [Source:HGNC Symbol;Acc:HGNC:20794]35489-2.826-0.6987Yes
83ARHGAP11ARho GTPase activating protein 11A [Source:HGNC Symbol;Acc:HGNC:15783]35522-2.864-0.6898Yes
84POLE2DNA polymerase epsilon 2, accessory subunit [Source:HGNC Symbol;Acc:HGNC:9178]35534-2.879-0.6803Yes
85DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35546-2.882-0.6708Yes
86GINS3GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]35647-3.009-0.6633Yes
87FBXO5F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]35655-3.023-0.6532Yes
88DNA2DNA replication helicase/nuclease 2 [Source:HGNC Symbol;Acc:HGNC:2939]35673-3.046-0.6433Yes
89TACC3transforming acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:HGNC:11524]35721-3.059-0.6342Yes
90FBXL20F-box and leucine rich repeat protein 20 [Source:HGNC Symbol;Acc:HGNC:24679]35739-3.075-0.6242Yes
91G3BP1G3BP stress granule assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:30292]35827-3.170-0.6158Yes
92CHAF1Achromatin assembly factor 1 subunit A [Source:HGNC Symbol;Acc:HGNC:1910]35929-3.291-0.6074Yes
93SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]35958-3.323-0.5968Yes
94CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]36019-3.358-0.5871Yes
95TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36054-3.383-0.5765Yes
96FANCD2FA complementation group D2 [Source:HGNC Symbol;Acc:HGNC:3585]36074-3.406-0.5654Yes
97SGO2shugoshin 2 [Source:HGNC Symbol;Acc:HGNC:30812]36079-3.411-0.5539Yes
98BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]36096-3.434-0.5427Yes
99KIF20Akinesin family member 20A [Source:HGNC Symbol;Acc:HGNC:9787]36110-3.445-0.5314Yes
100AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]36154-3.490-0.5207Yes
101BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36172-3.498-0.5092Yes
102CKAP2Lcytoskeleton associated protein 2 like [Source:HGNC Symbol;Acc:HGNC:26877]36259-3.585-0.4994Yes
103CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]36393-3.744-0.4903Yes
104ECT2epithelial cell transforming 2 [Source:HGNC Symbol;Acc:HGNC:3155]36407-3.768-0.4778Yes
105CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]36469-3.830-0.4665Yes
106DEPDC1DEP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22949]36474-3.838-0.4535Yes
107CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]36488-3.857-0.4408Yes
108HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]36512-3.898-0.4281Yes
109KIF14kinesin family member 14 [Source:HGNC Symbol;Acc:HGNC:19181]36518-3.905-0.4150Yes
110NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36519-3.907-0.4017Yes
111TMEM107transmembrane protein 107 [Source:HGNC Symbol;Acc:HGNC:28128]36523-3.913-0.3885Yes
112C4orf46chromosome 4 open reading frame 46 [Source:HGNC Symbol;Acc:HGNC:27320]36541-3.923-0.3757Yes
113NFIAnuclear factor I A [Source:HGNC Symbol;Acc:HGNC:7784]36560-3.951-0.3627Yes
114ANLNanillin actin binding protein [Source:HGNC Symbol;Acc:HGNC:14082]36582-3.982-0.3498Yes
115CDC6cell division cycle 6 [Source:HGNC Symbol;Acc:HGNC:1744]36584-3.986-0.3362Yes
116MYBL2MYB proto-oncogene like 2 [Source:HGNC Symbol;Acc:HGNC:7548]36588-3.994-0.3228Yes
117AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36589-3.996-0.3092Yes
118PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36590-3.998-0.2956Yes
119BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]36605-4.013-0.2823Yes
120CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36606-4.015-0.2687Yes
121PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]36660-4.066-0.2563Yes
122KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36668-4.079-0.2427Yes
123CEP55centrosomal protein 55 [Source:HGNC Symbol;Acc:HGNC:1161]36703-4.132-0.2295Yes
124MAP4K2mitogen-activated protein kinase kinase kinase kinase 2 [Source:HGNC Symbol;Acc:HGNC:6864]36704-4.133-0.2155Yes
125SPC25SPC25 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24031]36783-4.238-0.2032Yes
126RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36786-4.241-0.1889Yes
127FAM83Dfamily with sequence similarity 83 member D [Source:HGNC Symbol;Acc:HGNC:16122]36793-4.254-0.1746Yes
128KIF4Akinesin family member 4A [Source:HGNC Symbol;Acc:HGNC:13339]36803-4.278-0.1603Yes
129RAD54BRAD54 homolog B [Source:HGNC Symbol;Acc:HGNC:17228]36827-4.322-0.1462Yes
130FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36833-4.338-0.1316Yes
131CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36838-4.351-0.1169Yes
132NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36851-4.372-0.1024Yes
133DEPDC1BDEP domain containing 1B [Source:HGNC Symbol;Acc:HGNC:24902]36871-4.420-0.0879Yes
134ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36876-4.426-0.0730Yes
135GTSE1G2 and S-phase expressed 1 [Source:HGNC Symbol;Acc:HGNC:13698]36910-4.478-0.0586Yes
136SCDstearoyl-CoA desaturase [Source:HGNC Symbol;Acc:HGNC:10571]36921-4.491-0.0437Yes
137TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]36941-4.548-0.0287Yes
138APBB1amyloid beta precursor protein binding family B member 1 [Source:HGNC Symbol;Acc:HGNC:581]37003-4.697-0.0144Yes
139MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]37062-4.9280.0008Yes
Table: GSEA details [plain text format]



Fig 2: ODONNELL_TFRC_TARGETS_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ODONNELL_TFRC_TARGETS_DN: Random ES distribution   
Gene set null distribution of ES for ODONNELL_TFRC_TARGETS_DN