Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #KO_LPS_versus_KO_NA.Nof1.cls #KO_LPS_versus_KO_NA_repos |
| Phenotype | Nof1.cls#KO_LPS_versus_KO_NA_repos |
| Upregulated in class | KO_LPS |
| GeneSet | GNF2_CDH11 |
| Enrichment Score (ES) | 0.734095 |
| Normalized Enrichment Score (NES) | 1.4807955 |
| Nominal p-value | 0.03914591 |
| FDR q-value | 0.2662045 |
| FWER p-Value | 0.967 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | SERPINE1 | serpin family E member 1 [Source:HGNC Symbol;Acc:HGNC:8583] | 243 | 3.976 | 0.3210 | Yes |
| 2 | FBN1 | fibrillin 1 [Source:HGNC Symbol;Acc:HGNC:3603] | 390 | 3.514 | 0.6066 | Yes |
| 3 | LAMC1 | laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492] | 1420 | 1.884 | 0.7341 | Yes |
| 4 | CALU | calumenin [Source:HGNC Symbol;Acc:HGNC:1458] | 4040 | 0.475 | 0.7026 | No |
| 5 | RAI14 | retinoic acid induced 14 [Source:HGNC Symbol;Acc:HGNC:14873] | 5230 | 0.209 | 0.6877 | No |
| 6 | FKBP9 | FKBP prolyl isomerase 9 [Source:HGNC Symbol;Acc:HGNC:3725] | 9838 | 0.000 | 0.5634 | No |
| 7 | GFPT2 | glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242] | 10127 | 0.000 | 0.5556 | No |
| 8 | PTX3 | pentraxin 3 [Source:HGNC Symbol;Acc:HGNC:9692] | 12152 | 0.000 | 0.5010 | No |
| 9 | COL1A1 | collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197] | 12709 | 0.000 | 0.4860 | No |
| 10 | COL1A2 | collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198] | 12710 | 0.000 | 0.4860 | No |
| 11 | SERPINH1 | serpin family H member 1 [Source:HGNC Symbol;Acc:HGNC:1546] | 17760 | 0.000 | 0.3498 | No |
| 12 | COL6A2 | collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212] | 18732 | 0.000 | 0.3236 | No |
| 13 | COL6A1 | collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211] | 18733 | 0.000 | 0.3236 | No |
| 14 | COL3A1 | collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201] | 19667 | 0.000 | 0.2984 | No |
| 15 | LOXL1 | lysyl oxidase like 1 [Source:HGNC Symbol;Acc:HGNC:6665] | 19845 | 0.000 | 0.2937 | No |
| 16 | LOXL2 | lysyl oxidase like 2 [Source:HGNC Symbol;Acc:HGNC:6666] | 19846 | 0.000 | 0.2937 | No |
| 17 | LAMB1 | laminin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6486] | 20644 | 0.000 | 0.2722 | No |
| 18 | SRPX | sushi repeat containing protein X-linked [Source:HGNC Symbol;Acc:HGNC:11309] | 23975 | 0.000 | 0.1823 | No |
| 19 | COL5A1 | collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209] | 25065 | 0.000 | 0.1529 | No |
| 20 | COL5A2 | collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210] | 25066 | 0.000 | 0.1529 | No |
| 21 | FSTL1 | follistatin like 1 [Source:HGNC Symbol;Acc:HGNC:3972] | 26154 | 0.000 | 0.1236 | No |
| 22 | THBS2 | thrombospondin 2 [Source:HGNC Symbol;Acc:HGNC:11786] | 27632 | 0.000 | 0.0838 | No |
| 23 | PXDN | peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966] | 28541 | -0.116 | 0.0688 | No |
| 24 | CDH11 | cadherin 11 [Source:HGNC Symbol;Acc:HGNC:1750] | 30451 | -0.602 | 0.0669 | No |
| 25 | FN1 | fibronectin 1 [Source:HGNC Symbol;Acc:HGNC:3778] | 32818 | -1.362 | 0.1153 | No |
