Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetGNF2_CKS2
Enrichment Score (ES)-0.83806443
Normalized Enrichment Score (NES)-1.6304225
Nominal p-value0.0
FDR q-value9.003595E-4
FWER p-Value0.019
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_CKS2   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1MRPL35mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]29000.926-0.0713No
2CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]33450.744-0.0777No
3HNRNPABheterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:HGNC:5034]33640.733-0.0727No
4METAP2methionyl aminopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:16672]53790.166-0.1258No
5CCT2chaperonin containing TCP1 subunit 2 [Source:HGNC Symbol;Acc:HGNC:1615]53930.161-0.1250No
6SLBPstem-loop binding protein [Source:HGNC Symbol;Acc:HGNC:10904]56760.088-0.1319No
7ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]232530.000-0.6064No
8RPA3replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]29735-0.425-0.7782No
9SNRPD1small nuclear ribonucleoprotein D1 polypeptide [Source:HGNC Symbol;Acc:HGNC:11158]29933-0.478-0.7799No
10TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]32088-1.131-0.8296Yes
11PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]32234-1.194-0.8245Yes
12VRK1VRK serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:12718]32551-1.246-0.8237Yes
13PTTG1PTTG1 regulator of sister chromatid separation, securin [Source:HGNC Symbol;Acc:HGNC:9690]32691-1.316-0.8175Yes
14RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]33302-1.578-0.8221Yes
15CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]33303-1.578-0.8103Yes
16FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]33804-1.813-0.8102Yes
17HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]34287-2.069-0.8076Yes
18MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34480-2.139-0.7967Yes
19PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]34858-2.395-0.7889Yes
20SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35087-2.553-0.7759Yes
21RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35160-2.606-0.7582Yes
22RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]35172-2.617-0.7389Yes
23SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]35393-2.750-0.7242Yes
24DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35546-2.882-0.7066Yes
25GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]35585-2.932-0.6856Yes
26PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]35722-3.059-0.6663Yes
27MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]35740-3.078-0.6436Yes
28GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]35788-3.128-0.6214Yes
29CKAP2cytoskeleton associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1990]35926-3.289-0.6003Yes
30SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]35958-3.323-0.5762Yes
31TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36054-3.383-0.5534Yes
32DTLdenticleless E3 ubiquitin protein ligase homolog [Source:HGNC Symbol;Acc:HGNC:30288]36080-3.411-0.5284Yes
33KIF20Akinesin family member 20A [Source:HGNC Symbol;Acc:HGNC:9787]36110-3.445-0.5033Yes
34CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]36469-3.830-0.4842Yes
35CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]36488-3.857-0.4557Yes
36HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]36512-3.898-0.4270Yes
37RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36572-3.970-0.3988Yes
38NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36576-3.975-0.3690Yes
39PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36590-3.998-0.3393Yes
40BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]36605-4.013-0.3095Yes
41CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36606-4.015-0.2794Yes
42FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]36619-4.031-0.2494Yes
43CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36709-4.137-0.2207Yes
44GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]36753-4.198-0.1903Yes
45FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36833-4.338-0.1599Yes
46CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36838-4.351-0.1273Yes
47NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36851-4.372-0.0947Yes
48ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36876-4.426-0.0621Yes
49CDCA3cell division cycle associated 3 [Source:HGNC Symbol;Acc:HGNC:14624]36915-4.481-0.0295Yes
50TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]36941-4.5480.0040Yes
Table: GSEA details [plain text format]



Fig 2: GNF2_CKS2   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_CKS2: Random ES distribution   
Gene set null distribution of ES for GNF2_CKS2