Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetGNF2_PCNA
Enrichment Score (ES)-0.8743962
Normalized Enrichment Score (NES)-1.738401
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_PCNA   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]33450.744-0.0867No
2HNRNPABheterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:HGNC:5034]33640.733-0.0837No
3PA2G4proliferation-associated 2G4 [Source:HGNC Symbol;Acc:HGNC:8550]37800.570-0.0921No
4SLBPstem-loop binding protein [Source:HGNC Symbol;Acc:HGNC:10904]56760.088-0.1429No
5MT1JPmetallothionein 1J, pseudogene [Source:HGNC Symbol;Acc:HGNC:7402]158140.000-0.4167No
6ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]232530.000-0.6176No
7TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]32088-1.131-0.8507No
8PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]32234-1.194-0.8489No
9VRK1VRK serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:12718]32551-1.246-0.8514No
10CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]33303-1.578-0.8641No
11PAXIP1PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]33687-1.745-0.8660Yes
12NSD2nuclear receptor binding SET domain protein 2 [Source:HGNC Symbol;Acc:HGNC:12766]33740-1.773-0.8588Yes
13FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]33804-1.813-0.8517Yes
14HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]34287-2.069-0.8547Yes
15MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34480-2.139-0.8496Yes
16PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]34858-2.395-0.8482Yes
17PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35069-2.538-0.8416Yes
18SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35087-2.553-0.8297Yes
19MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]35150-2.598-0.8188Yes
20RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35160-2.606-0.8064Yes
21RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]35172-2.617-0.7941Yes
22SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]35393-2.750-0.7867Yes
23MCM5minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]35403-2.757-0.7736Yes
24TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]35409-2.763-0.7604Yes
25POLE2DNA polymerase epsilon 2, accessory subunit [Source:HGNC Symbol;Acc:HGNC:9178]35534-2.879-0.7498Yes
26DNAJC9DnaJ heat shock protein family (Hsp40) member C9 [Source:HGNC Symbol;Acc:HGNC:19123]35545-2.882-0.7362Yes
27DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35546-2.882-0.7222Yes
28GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]35585-2.932-0.7091Yes
29PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]35722-3.059-0.6980Yes
30MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]35740-3.078-0.6835Yes
31MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]35783-3.122-0.6696Yes
32GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]35788-3.128-0.6545Yes
33SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]35958-3.323-0.6430Yes
34RAD54LRAD54 like [Source:HGNC Symbol;Acc:HGNC:9826]36017-3.355-0.6284Yes
35MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36039-3.372-0.6127Yes
36TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36054-3.383-0.5967Yes
37DTLdenticleless E3 ubiquitin protein ligase homolog [Source:HGNC Symbol;Acc:HGNC:30288]36080-3.411-0.5808Yes
38TMPOthymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]36086-3.421-0.5644Yes
39BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]36096-3.434-0.5481Yes
40AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]36154-3.490-0.5327Yes
41CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]36163-3.495-0.5161Yes
42RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]36360-3.688-0.5035Yes
43CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]36469-3.830-0.4879Yes
44CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]36488-3.857-0.4697Yes
45KIF15kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]36511-3.893-0.4515Yes
46HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]36512-3.898-0.4327Yes
47KIF18Bkinesin family member 18B [Source:HGNC Symbol;Acc:HGNC:27102]36526-3.918-0.4141Yes
48RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36572-3.970-0.3961Yes
49NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36576-3.975-0.3770Yes
50MYBL2MYB proto-oncogene like 2 [Source:HGNC Symbol;Acc:HGNC:7548]36588-3.994-0.3579Yes
51PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36590-3.998-0.3386Yes
52H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36591-3.999-0.3193Yes
53BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]36605-4.013-0.3002Yes
54CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36606-4.015-0.2808Yes
55FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]36619-4.031-0.2617Yes
56KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36668-4.079-0.2432Yes
57CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36709-4.137-0.2243Yes
58GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]36753-4.198-0.2052Yes
59RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36786-4.241-0.1855Yes
60MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36795-4.256-0.1652Yes
61MSH2mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]36821-4.303-0.1450Yes
62FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36833-4.338-0.1243Yes
63CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36838-4.351-0.1034Yes
64NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36851-4.372-0.0826Yes
65ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36876-4.426-0.0618Yes
66ESPL1extra spindle pole bodies like 1, separase [Source:HGNC Symbol;Acc:HGNC:16856]36917-4.488-0.0412Yes
67TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]36941-4.548-0.0198Yes
68MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]37062-4.9280.0008Yes
Table: GSEA details [plain text format]



Fig 2: GNF2_PCNA   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_PCNA: Random ES distribution   
Gene set null distribution of ES for GNF2_PCNA