Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_LPS
GeneSetKRAS.BREAST_UP.V1_UP
Enrichment Score (ES)0.44282737
Normalized Enrichment Score (NES)1.173696
Nominal p-value0.052083332
FDR q-value0.21357614
FWER p-Value0.714
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.BREAST_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1Binterleukin 1 beta [Source:HGNC Symbol;Acc:HGNC:5992]34.9980.0486Yes
2LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]164.9720.0968Yes
3MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]714.7570.1417Yes
4TRAF1TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]1414.3790.1825Yes
5GLRXglutaredoxin [Source:HGNC Symbol;Acc:HGNC:4330]2653.8770.2170Yes
6IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]3193.7260.2519Yes
7TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]3753.5570.2851Yes
8DHRS9dehydrogenase/reductase 9 [Source:HGNC Symbol;Acc:HGNC:16888]6162.9580.3074Yes
9MKRN3makorin ring finger protein 3 [Source:HGNC Symbol;Acc:HGNC:7114]7972.6500.3284Yes
10COL9A3collagen type IX alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2219]8982.4940.3500Yes
11IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]9142.4610.3736Yes
12IL2RGinterleukin 2 receptor subunit gamma [Source:HGNC Symbol;Acc:HGNC:6010]10732.2000.3907Yes
13TAGLN3transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]12162.0750.4071Yes
14MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]16671.6730.4112Yes
15ACP3acid phosphatase 3 [Source:HGNC Symbol;Acc:HGNC:125]16681.6730.4275Yes
16PPP1R15Aprotein phosphatase 1 regulatory subunit 15A [Source:HGNC Symbol;Acc:HGNC:14375]16981.6480.4428Yes
17AKAP12A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]32020.7930.4099No
18TAPT1transmembrane anterior posterior transformation 1 [Source:HGNC Symbol;Acc:HGNC:26887]35140.6780.4081No
19CDSNcorneodesmosin [Source:HGNC Symbol;Acc:HGNC:1802]40510.4740.3982No
20FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]41640.4730.3998No
21BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]47260.3690.3882No
22TLR8toll like receptor 8 [Source:HGNC Symbol;Acc:HGNC:15632]50530.2570.3819No
23SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]51210.2360.3824No
24CCL16C-C motif chemokine ligand 16 [Source:HGNC Symbol;Acc:HGNC:10614]60220.0000.3580No
25CCL22C-C motif chemokine ligand 22 [Source:HGNC Symbol;Acc:HGNC:10621]60290.0000.3578No
26SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]61800.0000.3538No
27DEFB4Adefensin beta 4A [Source:HGNC Symbol;Acc:HGNC:2767]68570.0000.3355No
28ADAMDEC1ADAM like decysin 1 [Source:HGNC Symbol;Acc:HGNC:16299]68810.0000.3349No
29MAPK4mitogen-activated protein kinase 4 [Source:HGNC Symbol;Acc:HGNC:6878]81590.0000.3003No
30OPRPNopiorphin prepropeptide [Source:HGNC Symbol;Acc:HGNC:17279]81910.0000.2995No
31CYB5R2cytochrome b5 reductase 2 [Source:HGNC Symbol;Acc:HGNC:24376]81960.0000.2994No
32PRRX1paired related homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9142]83130.0000.2962No
33CALB1calbindin 1 [Source:HGNC Symbol;Acc:HGNC:1434]84770.0000.2918No
34SOX17SRY-box transcription factor 17 [Source:HGNC Symbol;Acc:HGNC:18122]84980.0000.2913No
35CLSTN2calsyntenin 2 [Source:HGNC Symbol;Acc:HGNC:17448]85930.0000.2887No
36CDK2AP2P3cyclin dependent kinase 2 associated protein 2 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:38494]94070.0000.2667No
37KCNA2potassium voltage-gated channel subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:6220]94250.0000.2663No
38NPAS1neuronal PAS domain protein 1 [Source:HGNC Symbol;Acc:HGNC:7894]95050.0000.2641No
39KCNK3potassium two pore domain channel subfamily K member 3 [Source:HGNC Symbol;Acc:HGNC:6278]95620.0000.2626No
40FAM30Afamily with sequence similarity 30 member A [Source:HGNC Symbol;Acc:HGNC:19955]96000.0000.2616No
41NFE2nuclear factor, erythroid 2 [Source:HGNC Symbol;Acc:HGNC:7780]97590.0000.2573No
42SPRR2Bsmall proline rich protein 2B [Source:HGNC Symbol;Acc:HGNC:11262]99180.0000.2530No
43IL1RAPL1interleukin 1 receptor accessory protein like 1 [Source:HGNC Symbol;Acc:HGNC:5996]101470.0000.2469No
44ERC2-IT1ERC2 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:1229]101790.0000.2460No
45KLK12kallikrein related peptidase 12 [Source:HGNC Symbol;Acc:HGNC:6360]102090.0000.2453No
46KCNA10potassium voltage-gated channel subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:6219]105680.0000.2356No
47PPBPpro-platelet basic protein [Source:HGNC Symbol;Acc:HGNC:9240]107310.0000.2312No
48ACKR4atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]108570.0000.2278No
49GPR37L1G protein-coupled receptor 37 like 1 [Source:HGNC Symbol;Acc:HGNC:14923]109720.0000.2247No
50PRB4proline rich protein BstNI subfamily 4 [Source:HGNC Symbol;Acc:HGNC:9340]112330.0000.2177No
51USH2Ausherin [Source:HGNC Symbol;Acc:HGNC:12601]112700.0000.2167No
52TMPRSS4transmembrane serine protease 4 [Source:HGNC Symbol;Acc:HGNC:11878]113290.0000.2151No
53CLPScolipase [Source:HGNC Symbol;Acc:HGNC:2085]114670.0000.2114No
54IGFBP3insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]115610.0000.2089No
55PSCAprostate stem cell antigen [Source:HGNC Symbol;Acc:HGNC:9500]115790.0000.2084No
56CMA1chymase 1 [Source:HGNC Symbol;Acc:HGNC:2097]116050.0000.2078No
57ESM1endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]116800.0000.2058No
58ATP12AATPase H+/K+ transporting non-gastric alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:13816]119120.0000.1995No
59PRDM1PR/SET domain 1 [Source:HGNC Symbol;Acc:HGNC:9346]120560.0000.1956No
60ETV2ETS variant transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:3491]121200.0000.1939No
61IGF2insulin like growth factor 2 [Source:HGNC Symbol;Acc:HGNC:5466]122820.0000.1896No
62TAAR5trace amine associated receptor 5 [Source:HGNC Symbol;Acc:HGNC:30236]124190.0000.1859No
63GULP1GULP PTB domain containing engulfment adaptor 1 [Source:HGNC Symbol;Acc:HGNC:18649]129800.0000.1708No
64OR2C1olfactory receptor family 2 subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:8242]133110.0000.1618No
65IL37interleukin 37 [Source:HGNC Symbol;Acc:HGNC:15563]136850.0000.1517No
66NDUFA4L2NDUFA4 mitochondrial complex associated like 2 [Source:HGNC Symbol;Acc:HGNC:29836]138480.0000.1473No
67EFNA5ephrin A5 [Source:HGNC Symbol;Acc:HGNC:3225]141850.0000.1383No
68HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]142730.0000.1359No
69ZP4zona pellucida glycoprotein 4 [Source:HGNC Symbol;Acc:HGNC:15770]146590.0000.1255No
70IL17RBinterleukin 17 receptor B [Source:HGNC Symbol;Acc:HGNC:18015]149680.0000.1171No
71SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]153390.0000.1071No
72GJA8gap junction protein alpha 8 [Source:HGNC Symbol;Acc:HGNC:4281]154120.0000.1052No
73IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]158010.0000.0947No
74AMELYamelogenin Y-linked [Source:HGNC Symbol;Acc:HGNC:462]159110.0000.0917No
75MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]171060.0000.0594No
76CEACAM3CEA cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:1815]178760.0000.0386No
77DNAJA4DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]185270.0000.0210No
78PCDHGA11protocadherin gamma subfamily A, 11 [Source:HGNC Symbol;Acc:HGNC:8698]188580.0000.0121No
79SPON2spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]189710.0000.0091No
80COL9A1collagen type IX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2217]190020.0000.0082No
81BMP6bone morphogenetic protein 6 [Source:HGNC Symbol;Acc:HGNC:1073]190950.0000.0058No
82NRLneural retina leucine zipper [Source:HGNC Symbol;Acc:HGNC:8002]194160.000-0.0029No
83CXCL3C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]194930.000-0.0050No
84CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]194940.000-0.0050No
85HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]198200.000-0.0138No
86NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]205790.000-0.0343No
87CFAP43cilia and flagella associated protein 43 [Source:HGNC Symbol;Acc:HGNC:26684]206180.000-0.0353No
88KCNJ14potassium inwardly rectifying channel subfamily J member 14 [Source:HGNC Symbol;Acc:HGNC:6260]207880.000-0.0399No
89KCNJ16potassium inwardly rectifying channel subfamily J member 16 [Source:HGNC Symbol;Acc:HGNC:6262]207910.000-0.0399No
90SNAP25synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]210780.000-0.0477No
91SPACA1sperm acrosome associated 1 [Source:HGNC Symbol;Acc:HGNC:14967]210940.000-0.0481No
92KCNK15potassium two pore domain channel subfamily K member 15 [Source:HGNC Symbol;Acc:HGNC:13814]211660.000-0.0500No
93ALPPalkaline phosphatase, placental [Source:HGNC Symbol;Acc:HGNC:439]212880.000-0.0533No
94FAM155Bfamily with sequence similarity 155 member B [Source:HGNC Symbol;Acc:HGNC:30701]213680.000-0.0554No
95ADGRD2adhesion G protein-coupled receptor D2 [Source:HGNC Symbol;Acc:HGNC:18651]213710.000-0.0555No
96CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]214530.000-0.0577No
97WNT16Wnt family member 16 [Source:HGNC Symbol;Acc:HGNC:16267]217740.000-0.0663No
98HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]218920.000-0.0695No
99ANO2anoctamin 2 [Source:HGNC Symbol;Acc:HGNC:1183]220550.000-0.0739No
100SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]225240.000-0.0865No
101OCA2OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]231490.000-0.1034No
102A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]241310.000-0.1300No
103FMO2flavin containing dimethylaniline monoxygenase 2 [Source:HGNC Symbol;Acc:HGNC:3770]243010.000-0.1345No
104GABRA3gamma-aminobutyric acid type A receptor subunit alpha3 [Source:HGNC Symbol;Acc:HGNC:4077]246640.000-0.1443No
105NR1H4nuclear receptor subfamily 1 group H member 4 [Source:HGNC Symbol;Acc:HGNC:7967]246650.000-0.1443No
106KLK6kallikrein related peptidase 6 [Source:HGNC Symbol;Acc:HGNC:6367]253940.000-0.1640No
107TFPItissue factor pathway inhibitor [Source:HGNC Symbol;Acc:HGNC:11760]255440.000-0.1681No
108KRT34keratin 34 [Source:HGNC Symbol;Acc:HGNC:6452]267840.000-0.2016No
109CRCT1cysteine rich C-terminal 1 [Source:HGNC Symbol;Acc:HGNC:29875]269930.000-0.2072No
110RMSTrhabdomyosarcoma 2 associated transcript [Source:HGNC Symbol;Acc:HGNC:29893]270880.000-0.2098No
111CMKLR1chemerin chemokine-like receptor 1 [Source:HGNC Symbol;Acc:HGNC:2121]272600.000-0.2144No
112KRT33Bkeratin 33B [Source:HGNC Symbol;Acc:HGNC:6451]275290.000-0.2216No
113RBMY2FPRNA binding motif protein Y-linked family 2 member F, pseudogene [Source:HGNC Symbol;Acc:HGNC:23891]278380.000-0.2300No
114ANKRD36BP2ankyrin repeat domain 36B pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:33607]279820.000-0.2339No
115STX1Asyntaxin 1A [Source:HGNC Symbol;Acc:HGNC:11433]28646-0.144-0.2504No
116STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]28887-0.203-0.2549No
117PDE3Bphosphodiesterase 3B [Source:HGNC Symbol;Acc:HGNC:8779]28936-0.215-0.2541No
118CTNNA2catenin alpha 2 [Source:HGNC Symbol;Acc:HGNC:2510]30231-0.537-0.2839No
119GFI1growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]31053-0.790-0.2984No
120OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]31608-0.959-0.3041No
121BAIAP3BAI1 associated protein 3 [Source:HGNC Symbol;Acc:HGNC:948]31681-0.985-0.2964No
122GSG1germ cell associated 1 [Source:HGNC Symbol;Acc:HGNC:19716]32848-1.374-0.3146No
123KCNAB3potassium voltage-gated channel subfamily A regulatory beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:6230]32876-1.388-0.3018No
124LILRA6leukocyte immunoglobulin like receptor A6 [Source:HGNC Symbol;Acc:HGNC:15495]32921-1.410-0.2892No
125CEACAM1CEA cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:1814]33142-1.505-0.2805No
126S100A5S100 calcium binding protein A5 [Source:HGNC Symbol;Acc:HGNC:10495]33585-1.711-0.2758No
127SCELsciellin [Source:HGNC Symbol;Acc:HGNC:10573]33810-1.817-0.2641No
128SAMD14sterile alpha motif domain containing 14 [Source:HGNC Symbol;Acc:HGNC:27312]33964-1.893-0.2498No
129PDE2Aphosphodiesterase 2A [Source:HGNC Symbol;Acc:HGNC:8777]34084-1.955-0.2340No
130KCNC2potassium voltage-gated channel subfamily C member 2 [Source:HGNC Symbol;Acc:HGNC:6234]34407-2.127-0.2220No
131SYPsynaptophysin [Source:HGNC Symbol;Acc:HGNC:11506]35378-2.738-0.2215No
132LYL1LYL1 basic helix-loop-helix family member [Source:HGNC Symbol;Acc:HGNC:6734]35386-2.744-0.1950No
133MYCNMYCN proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7559]35633-2.988-0.1725No
134TMEM176Atransmembrane protein 176A [Source:HGNC Symbol;Acc:HGNC:24930]35826-3.170-0.1468No
135CASS4Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]36221-3.527-0.1231No
136KIF24kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]36276-3.605-0.0894No
137H2AC13H2A clustered histone 13 [Source:HGNC Symbol;Acc:HGNC:4725]36296-3.622-0.0546No
138KIF5Akinesin family member 5A [Source:HGNC Symbol;Acc:HGNC:6323]36365-3.703-0.0203No
139TERTtelomerase reverse transcriptase [Source:HGNC Symbol;Acc:HGNC:11730]36684-4.0950.0110No
Table: GSEA details [plain text format]



Fig 2: KRAS.BREAST_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.BREAST_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.BREAST_UP.V1_UP