Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_LPS
GeneSetKRAS.KIDNEY_UP.V1_DN
Enrichment Score (ES)0.46420896
Normalized Enrichment Score (NES)1.2189404
Nominal p-value0.038961038
FDR q-value0.1697076
FWER p-Value0.572
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.KIDNEY_UP.V1_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1RSAD2radical S-adenosyl methionine domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30908]174.9710.0432Yes
2PTGER2prostaglandin E receptor 2 [Source:HGNC Symbol;Acc:HGNC:9594]364.9260.0859Yes
3MX2MX dynamin like GTPase 2 [Source:HGNC Symbol;Acc:HGNC:7533]554.8270.1278Yes
4MX1MX dynamin like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:7532]664.7760.1694Yes
5CXCL10C-X-C motif chemokine ligand 10 [Source:HGNC Symbol;Acc:HGNC:10637]784.7270.2106Yes
6OAS12'-5'-oligoadenylate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:8086]3073.7810.2376Yes
7IL6interleukin 6 [Source:HGNC Symbol;Acc:HGNC:6018]3413.6470.2687Yes
8CD14CD14 molecule [Source:HGNC Symbol;Acc:HGNC:1628]5363.1380.2910Yes
9KCND1potassium voltage-gated channel subfamily D member 1 [Source:HGNC Symbol;Acc:HGNC:6237]5383.1380.3185Yes
10STX11syntaxin 11 [Source:HGNC Symbol;Acc:HGNC:11429]6002.9860.3430Yes
11CBARPCACN subunit beta associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28617]7142.8370.3649Yes
12PDCD1programmed cell death 1 [Source:HGNC Symbol;Acc:HGNC:8760]7642.7080.3873Yes
13ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]8062.6380.4093Yes
14SRCSRC proto-oncogene, non-receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11283]8702.5170.4297Yes
15ACTC1actin alpha cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]9502.4000.4486Yes
16EFHD1EF-hand domain family member D1 [Source:HGNC Symbol;Acc:HGNC:29556]10832.1820.4642Yes
17IFI44Linterferon induced protein 44 like [Source:HGNC Symbol;Acc:HGNC:17817]19121.4580.4546No
18HINFPhistone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]30770.8490.4305No
19APBB3amyloid beta precursor protein binding family B member 3 [Source:HGNC Symbol;Acc:HGNC:20708]31610.8100.4354No
20ZDHHC8P1ZDHHC8 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:26461]35110.6790.4319No
21TACR2tachykinin receptor 2 [Source:HGNC Symbol;Acc:HGNC:11527]38230.5540.4284No
22THRBthyroid hormone receptor beta [Source:HGNC Symbol;Acc:HGNC:11799]38290.5530.4331No
23DDX51DEAD-box helicase 51 [Source:HGNC Symbol;Acc:HGNC:20082]39650.5000.4338No
24RBISribosomal biogenesis factor [Source:HGNC Symbol;Acc:HGNC:32235]40010.4880.4372No
25BRDTbromodomain testis associated [Source:HGNC Symbol;Acc:HGNC:1105]43940.4730.4307No
26LIPElipase E, hormone sensitive type [Source:HGNC Symbol;Acc:HGNC:6621]51530.2300.4122No
27CBLCbl proto-oncogene [Source:HGNC Symbol;Acc:HGNC:1541]53390.1770.4088No
28NESnestin [Source:HGNC Symbol;Acc:HGNC:7756]53620.1700.4096No
29CARD9caspase recruitment domain family member 9 [Source:HGNC Symbol;Acc:HGNC:16391]55870.1130.4046No
30CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]60320.0000.3926No
31CCL27C-C motif chemokine ligand 27 [Source:HGNC Symbol;Acc:HGNC:10626]60500.0000.3921No
32IL1RL2interleukin 1 receptor like 2 [Source:HGNC Symbol;Acc:HGNC:5999]65770.0000.3779No
33EPHA5EPH receptor A5 [Source:HGNC Symbol;Acc:HGNC:3389]71160.0000.3633No
34ASPNasporin [Source:HGNC Symbol;Acc:HGNC:14872]74500.0000.3543No
35SGK2serum/glucocorticoid regulated kinase 2 [Source:HGNC Symbol;Acc:HGNC:13900]75540.0000.3515No
36OR7A10olfactory receptor family 7 subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:8356]77740.0000.3456No
37PROP1PROP paired-like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9455]80300.0000.3387No
38SIM1SIM bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10882]80800.0000.3374No
39FOLR2folate receptor beta [Source:HGNC Symbol;Acc:HGNC:3793]92090.0000.3068No
40SERHL2serine hydrolase like 2 [Source:HGNC Symbol;Acc:HGNC:29446]92920.0000.3046No
41KCNF1potassium voltage-gated channel modifier subfamily F member 1 [Source:HGNC Symbol;Acc:HGNC:6246]95120.0000.2987No
42CETPcholesteryl ester transfer protein [Source:HGNC Symbol;Acc:HGNC:1869]95870.0000.2967No
43GRM2glutamate metabotropic receptor 2 [Source:HGNC Symbol;Acc:HGNC:4594]96870.0000.2940No
44GRM4glutamate metabotropic receptor 4 [Source:HGNC Symbol;Acc:HGNC:4596]96900.0000.2940No
45GRM8glutamate metabotropic receptor 8 [Source:HGNC Symbol;Acc:HGNC:4600]96930.0000.2939No
46AADACarylacetamide deacetylase [Source:HGNC Symbol;Acc:HGNC:17]101100.0000.2826No
47HHIPL2HHIP like 2 [Source:HGNC Symbol;Acc:HGNC:25842]108040.0000.2639No
48LRRC31leucine rich repeat containing 31 [Source:HGNC Symbol;Acc:HGNC:26261]111680.0000.2541No
49IFI30IFI30 lysosomal thiol reductase [Source:HGNC Symbol;Acc:HGNC:5398]112800.0000.2511No
50EREGepiregulin [Source:HGNC Symbol;Acc:HGNC:3443]112880.0000.2509No
51PRG2proteoglycan 2, pro eosinophil major basic protein [Source:HGNC Symbol;Acc:HGNC:9362]113070.0000.2504No
52LMAN1Llectin, mannose binding 1 like [Source:HGNC Symbol;Acc:HGNC:6632]116240.0000.2418No
53SLC6A20solute carrier family 6 member 20 [Source:HGNC Symbol;Acc:HGNC:30927]116480.0000.2412No
54RYR2ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]116740.0000.2405No
55CNN1calponin 1 [Source:HGNC Symbol;Acc:HGNC:2155]120870.0000.2294No
56ADAMTSL2ADAMTS like 2 [Source:HGNC Symbol;Acc:HGNC:14631]124450.0000.2197No
57THBDthrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784]125080.0000.2181No
58TENM2teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]125690.0000.2164No
59LILRA4leukocyte immunoglobulin like receptor A4 [Source:HGNC Symbol;Acc:HGNC:15503]132740.0000.1974No
60LILRB4leukocyte immunoglobulin like receptor B4 [Source:HGNC Symbol;Acc:HGNC:6608]132820.0000.1972No
61GATA4GATA binding protein 4 [Source:HGNC Symbol;Acc:HGNC:4173]133770.0000.1946No
62IL26interleukin 26 [Source:HGNC Symbol;Acc:HGNC:17119]136190.0000.1881No
63TMEM262transmembrane protein 262 [Source:HGNC Symbol;Acc:HGNC:49389]137030.0000.1859No
64KRT2keratin 2 [Source:HGNC Symbol;Acc:HGNC:6439]140350.0000.1769No
65B3GALT5beta-1,3-galactosyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:920]143730.0000.1678No
66IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]158030.0000.1291No
67NPC1L1NPC1 like intracellular cholesterol transporter 1 [Source:HGNC Symbol;Acc:HGNC:7898]159070.0000.1264No
68C3orf36chromosome 3 putative open reading frame 36 [Source:HGNC Symbol;Acc:HGNC:26170]159350.0000.1256No
69MDFIMyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]160800.0000.1217No
70TTLL2tubulin tyrosine ligase like 2 [Source:HGNC Symbol;Acc:HGNC:21211]161020.0000.1212No
71HYAL4hyaluronidase 4 [Source:HGNC Symbol;Acc:HGNC:5323]161980.0000.1186No
72HRGhistidine rich glycoprotein [Source:HGNC Symbol;Acc:HGNC:5181]174480.0000.0848No
73SLC9A3solute carrier family 9 member A3 [Source:HGNC Symbol;Acc:HGNC:11073]175220.0000.0828No
74CHRNGcholinergic receptor nicotinic gamma subunit [Source:HGNC Symbol;Acc:HGNC:1967]178010.0000.0753No
75CHRM2cholinergic receptor muscarinic 2 [Source:HGNC Symbol;Acc:HGNC:1951]178110.0000.0750No
76IFNA17interferon alpha 17 [Source:HGNC Symbol;Acc:HGNC:5422]181800.0000.0651No
77PTPRCAPprotein tyrosine phosphatase receptor type C associated protein [Source:HGNC Symbol;Acc:HGNC:9667]181860.0000.0650No
78CXCL11C-X-C motif chemokine ligand 11 [Source:HGNC Symbol;Acc:HGNC:10638]189340.0000.0447No
79DSG3desmoglein 3 [Source:HGNC Symbol;Acc:HGNC:3050]189530.0000.0443No
80MSCmusculin [Source:HGNC Symbol;Acc:HGNC:7321]190750.0000.0410No
81BMP4bone morphogenetic protein 4 [Source:HGNC Symbol;Acc:HGNC:1071]190980.0000.0404No
82EPS8L3EPS8 like 3 [Source:HGNC Symbol;Acc:HGNC:21297]191660.0000.0386No
83NGFnerve growth factor [Source:HGNC Symbol;Acc:HGNC:7808]193090.0000.0347No
84HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]198200.0000.0209No
85VILLvillin like [Source:HGNC Symbol;Acc:HGNC:30906]198670.0000.0197No
86NR1I3nuclear receptor subfamily 1 group I member 3 [Source:HGNC Symbol;Acc:HGNC:7969]200020.0000.0161No
87ATP1B4ATPase Na+/K+ transporting family member beta 4 [Source:HGNC Symbol;Acc:HGNC:808]202280.0000.0100No
88FOXA1forkhead box A1 [Source:HGNC Symbol;Acc:HGNC:5021]205750.0000.0006No
89NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]205790.0000.0005No
90TCP10L3t-complex 10 like 3, pseudogene [Source:HGNC Symbol;Acc:HGNC:11656]207370.000-0.0037No
91IGKV3D-15immunoglobulin kappa variable 3D-15 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:5824]207520.000-0.0041No
92NPFFR1neuropeptide FF receptor 1 [Source:HGNC Symbol;Acc:HGNC:17425]211520.000-0.0149No
93CST5cystatin D [Source:HGNC Symbol;Acc:HGNC:2477]216710.000-0.0289No
94CHRNA9cholinergic receptor nicotinic alpha 9 subunit [Source:HGNC Symbol;Acc:HGNC:14079]217420.000-0.0308No
95PRSS21serine protease 21 [Source:HGNC Symbol;Acc:HGNC:9485]222330.000-0.0441No
96SLC5A5solute carrier family 5 member 5 [Source:HGNC Symbol;Acc:HGNC:11040]227850.000-0.0590No
97CAPN9calpain 9 [Source:HGNC Symbol;Acc:HGNC:1486]229920.000-0.0646No
98ABCB11ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]234700.000-0.0775No
99PAGE1PAGE family member 1 [Source:HGNC Symbol;Acc:HGNC:4107]236290.000-0.0817No
100MAGEA10MAGE family member A10 [Source:HGNC Symbol;Acc:HGNC:6797]236350.000-0.0819No
101ITIH5inter-alpha-trypsin inhibitor heavy chain 5 [Source:HGNC Symbol;Acc:HGNC:21449]240590.000-0.0933No
102FCHO1FCH and mu domain containing endocytic adaptor 1 [Source:HGNC Symbol;Acc:HGNC:29002]240720.000-0.0936No
103ACEangiotensin I converting enzyme [Source:HGNC Symbol;Acc:HGNC:2707]242490.000-0.0984No
104BAATbile acid-CoA:amino acid N-acyltransferase [Source:HGNC Symbol;Acc:HGNC:932]242720.000-0.0990No
105KLHDC8Akelch domain containing 8A [Source:HGNC Symbol;Acc:HGNC:25573]247940.000-0.1131No
106TCF21transcription factor 21 [Source:HGNC Symbol;Acc:HGNC:11632]251840.000-0.1236No
107KLK1kallikrein 1 [Source:HGNC Symbol;Acc:HGNC:6357]253840.000-0.1290No
108EDN2endothelin 2 [Source:HGNC Symbol;Acc:HGNC:3177]259120.000-0.1433No
109INSL5insulin like 5 [Source:HGNC Symbol;Acc:HGNC:6088]266840.000-0.1641No
110INSL4insulin like 4 [Source:HGNC Symbol;Acc:HGNC:6087]266850.000-0.1641No
111KRT17keratin 17 [Source:HGNC Symbol;Acc:HGNC:6427]268290.000-0.1680No
112RASGRF1Ras protein specific guanine nucleotide releasing factor 1 [Source:HGNC Symbol;Acc:HGNC:9875]277880.000-0.1939No
113CACNA1Scalcium voltage-gated channel subunit alpha1 S [Source:HGNC Symbol;Acc:HGNC:1397]29546-0.373-0.2382No
114RPL10P17ribosomal protein L10 pseudogene 17 [Source:HGNC Symbol;Acc:HGNC:52348]30185-0.537-0.2507No
115AGRPagouti related neuropeptide [Source:HGNC Symbol;Acc:HGNC:330]31995-1.091-0.2901No
116TYROBPtransmembrane immune signaling adaptor TYROBP [Source:HGNC Symbol;Acc:HGNC:12449]32026-1.104-0.2813No
117KCNN1potassium calcium-activated channel subfamily N member 1 [Source:HGNC Symbol;Acc:HGNC:6290]32035-1.107-0.2718No
118CLEC3BC-type lectin domain family 3 member B [Source:HGNC Symbol;Acc:HGNC:11891]32090-1.132-0.2633No
119SRD5A3steroid 5 alpha-reductase 3 [Source:HGNC Symbol;Acc:HGNC:25812]32103-1.138-0.2536No
120GPR35G protein-coupled receptor 35 [Source:HGNC Symbol;Acc:HGNC:4492]32113-1.141-0.2439No
121DEPDC5DEP domain containing 5, GATOR1 subcomplex subunit [Source:HGNC Symbol;Acc:HGNC:18423]33216-1.541-0.2601No
122ECEL1endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]33486-1.660-0.2529No
123SPATA6spermatogenesis associated 6 [Source:HGNC Symbol;Acc:HGNC:18309]33921-1.879-0.2481No
124KLF3Kruppel like factor 3 [Source:HGNC Symbol;Acc:HGNC:16516]34572-2.215-0.2463No
125SEC31BSEC31 homolog B, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:23197]34957-2.450-0.2352No
126KIF21Bkinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]35191-2.638-0.2183No
127DRC3dynein regulatory complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25384]35418-2.769-0.2001No
128ABCA3ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]35606-2.956-0.1793No
129PHLDA3pleckstrin homology like domain family A member 3 [Source:HGNC Symbol;Acc:HGNC:8934]35724-3.061-0.1556No
130SEMA5Asemaphorin 5A [Source:HGNC Symbol;Acc:HGNC:10736]35866-3.204-0.1313No
131EGFL7EGF like domain multiple 7 [Source:HGNC Symbol;Acc:HGNC:20594]36098-3.435-0.1074No
132H2AC13H2A clustered histone 13 [Source:HGNC Symbol;Acc:HGNC:4725]36296-3.622-0.0809No
133CSF1Rcolony stimulating factor 1 receptor [Source:HGNC Symbol;Acc:HGNC:2433]36468-3.830-0.0520No
134LFNGLFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]36520-3.908-0.0191No
135TREM2triggering receptor expressed on myeloid cells 2 [Source:HGNC Symbol;Acc:HGNC:17761]36543-3.9260.0148No
Table: GSEA details [plain text format]



Fig 2: KRAS.KIDNEY_UP.V1_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.KIDNEY_UP.V1_DN: Random ES distribution   
Gene set null distribution of ES for KRAS.KIDNEY_UP.V1_DN