Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetKRAS.KIDNEY_UP.V1_UP
Enrichment Score (ES)-0.6396244
Normalized Enrichment Score (NES)-1.3584741
Nominal p-value0.0076670316
FDR q-value0.13885288
FWER p-Value0.787
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.KIDNEY_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CCND2cyclin D2 [Source:HGNC Symbol;Acc:HGNC:1583]3933.4960.0350No
2PLCL1phospholipase C like 1 (inactive) [Source:HGNC Symbol;Acc:HGNC:9063]15281.7910.0277No
3ETV1ETS variant transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3490]15841.7300.0488No
4DDX6DEAD-box helicase 6 [Source:HGNC Symbol;Acc:HGNC:2747]18751.4880.0603No
5RNLSrenalase, FAD dependent amine oxidase [Source:HGNC Symbol;Acc:HGNC:25641]21301.3400.0709No
6SERPINI1serpin family I member 1 [Source:HGNC Symbol;Acc:HGNC:8943]24111.1830.0788No
7NME5NME/NM23 family member 5 [Source:HGNC Symbol;Acc:HGNC:7853]31920.7970.0681No
8SLC12A5solute carrier family 12 member 5 [Source:HGNC Symbol;Acc:HGNC:13818]33890.7240.0723No
9CPEB3cytoplasmic polyadenylation element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:21746]39120.5170.0649No
10NUDT11nudix hydrolase 11 [Source:HGNC Symbol;Acc:HGNC:18011]43870.4730.0582No
11CAB39Lcalcium binding protein 39 like [Source:HGNC Symbol;Acc:HGNC:20290]45300.4300.0600No
12KITKIT proto-oncogene, receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6342]53160.1820.0411No
13SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]61800.0000.0178No
14SCG3secretogranin III [Source:HGNC Symbol;Acc:HGNC:13707]61820.0000.0177No
15WSCD1WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]62000.0000.0173No
16CRYABcrystallin alpha B [Source:HGNC Symbol;Acc:HGNC:2389]63170.0000.0141No
17RAPGEF4Rap guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:16626]63200.0000.0141No
18DYNC1I1dynein cytoplasmic 1 intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:2963]65390.0000.0082No
19AQP4aquaporin 4 [Source:HGNC Symbol;Acc:HGNC:637]67290.0000.0031No
20NRXN1neurexin 1 [Source:HGNC Symbol;Acc:HGNC:8008]68610.000-0.0005No
21HPCAL4hippocalcin like 4 [Source:HGNC Symbol;Acc:HGNC:18212]69130.000-0.0019No
22HEY1hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]69710.000-0.0034No
23GPRC5BG protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]69810.000-0.0036No
24ASPAaspartoacylase [Source:HGNC Symbol;Acc:HGNC:756]74620.000-0.0166No
25MPZL2myelin protein zero like 2 [Source:HGNC Symbol;Acc:HGNC:3496]75710.000-0.0195No
26EPB41L3erythrocyte membrane protein band 4.1 like 3 [Source:HGNC Symbol;Acc:HGNC:3380]76970.000-0.0229No
27PCDH9protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]77960.000-0.0256No
28PELI2pellino E3 ubiquitin protein ligase family member 2 [Source:HGNC Symbol;Acc:HGNC:8828]82130.000-0.0368No
29CALB1calbindin 1 [Source:HGNC Symbol;Acc:HGNC:1434]84770.000-0.0440No
30SMR3Asubmaxillary gland androgen regulated protein 3A [Source:HGNC Symbol;Acc:HGNC:19216]85980.000-0.0472No
31PLSCR4phospholipid scramblase 4 [Source:HGNC Symbol;Acc:HGNC:16497]89070.000-0.0555No
32GRIA2glutamate ionotropic receptor AMPA type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4572]89360.000-0.0563No
33CDR1cerebellar degeneration related protein 1 [Source:HGNC Symbol;Acc:HGNC:1798]92320.000-0.0643No
34NEBLnebulette [Source:HGNC Symbol;Acc:HGNC:16932]93800.000-0.0683No
35NEFLneurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]93970.000-0.0687No
36KCNA5potassium voltage-gated channel subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:6224]94310.000-0.0696No
37KCNJ8potassium inwardly rectifying channel subfamily J member 8 [Source:HGNC Symbol;Acc:HGNC:6269]95560.000-0.0729No
38LIMCH1LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]95750.000-0.0734No
39GRM5glutamate metabotropic receptor 5 [Source:HGNC Symbol;Acc:HGNC:4597]96890.000-0.0765No
40PMP2peripheral myelin protein 2 [Source:HGNC Symbol;Acc:HGNC:9117]100960.000-0.0875No
41RTN1reticulon 1 [Source:HGNC Symbol;Acc:HGNC:10467]102360.000-0.0912No
42CHGAchromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]102870.000-0.0926No
43CHGBchromogranin B [Source:HGNC Symbol;Acc:HGNC:1930]103080.000-0.0931No
44SPARCL1SPARC like 1 [Source:HGNC Symbol;Acc:HGNC:11220]111140.000-0.1149No
45ERC2ELKS/RAB6-interacting/CAST family member 2 [Source:HGNC Symbol;Acc:HGNC:31922]112400.000-0.1183No
46SLC6A15solute carrier family 6 member 15 [Source:HGNC Symbol;Acc:HGNC:13621]116260.000-0.1287No
47SIGLEC15sialic acid binding Ig like lectin 15 [Source:HGNC Symbol;Acc:HGNC:27596]116590.000-0.1296No
48NAP1L2nucleosome assembly protein 1 like 2 [Source:HGNC Symbol;Acc:HGNC:7638]118140.000-0.1337No
49ITGBL1integrin subunit beta like 1 [Source:HGNC Symbol;Acc:HGNC:6164]122840.000-0.1464No
50GAD1glutamate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:4092]123230.000-0.1475No
51GAP43growth associated protein 43 [Source:HGNC Symbol;Acc:HGNC:4140]126360.000-0.1559No
52GCGRglucagon receptor [Source:HGNC Symbol;Acc:HGNC:4192]129570.000-0.1646No
53ESRRGestrogen related receptor gamma [Source:HGNC Symbol;Acc:HGNC:3474]131230.000-0.1690No
54VIPR2vasoactive intestinal peptide receptor 2 [Source:HGNC Symbol;Acc:HGNC:12695]132130.000-0.1714No
55RELNreelin [Source:HGNC Symbol;Acc:HGNC:9957]136680.000-0.1837No
56GHRHgrowth hormone releasing hormone [Source:HGNC Symbol;Acc:HGNC:4265]150280.000-0.2205No
57RIT2Ras like without CAAX 2 [Source:HGNC Symbol;Acc:HGNC:10017]153200.000-0.2284No
58PCP4Purkinje cell protein 4 [Source:HGNC Symbol;Acc:HGNC:8742]153450.000-0.2290No
59SV2Bsynaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874]156410.000-0.2370No
60TCEAL2transcription elongation factor A like 2 [Source:HGNC Symbol;Acc:HGNC:29818]158770.000-0.2434No
61XKX-linked Kx blood group [Source:HGNC Symbol;Acc:HGNC:12811]162120.000-0.2524No
62NMNAT2nicotinamide nucleotide adenylyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:16789]163910.000-0.2572No
63GPM6Aglycoprotein M6A [Source:HGNC Symbol;Acc:HGNC:4460]165130.000-0.2605No
64TRIB2tribbles pseudokinase 2 [Source:HGNC Symbol;Acc:HGNC:30809]167940.000-0.2681No
65SYT1synaptotagmin 1 [Source:HGNC Symbol;Acc:HGNC:11509]169570.000-0.2725No
66GPR37G protein-coupled receptor 37 [Source:HGNC Symbol;Acc:HGNC:4494]174640.000-0.2862No
67SLC12A3solute carrier family 12 member 3 [Source:HGNC Symbol;Acc:HGNC:10912]175440.000-0.2883No
68TRIM9tripartite motif containing 9 [Source:HGNC Symbol;Acc:HGNC:16288]177790.000-0.2946No
69FZD3frizzled class receptor 3 [Source:HGNC Symbol;Acc:HGNC:4041]192320.000-0.3339No
70NDNnecdin, MAGE family member [Source:HGNC Symbol;Acc:HGNC:7675]192910.000-0.3355No
71GABRB1gamma-aminobutyric acid type A receptor subunit beta1 [Source:HGNC Symbol;Acc:HGNC:4081]199790.000-0.3541No
72NOL4nucleolar protein 4 [Source:HGNC Symbol;Acc:HGNC:7870]202020.000-0.3601No
73WIF1WNT inhibitory factor 1 [Source:HGNC Symbol;Acc:HGNC:18081]202050.000-0.3601No
74CFAP69cilia and flagella associated protein 69 [Source:HGNC Symbol;Acc:HGNC:26107]203030.000-0.3628No
75SFRP1secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]205130.000-0.3684No
76DLGAP2DLG associated protein 2 [Source:HGNC Symbol;Acc:HGNC:2906]209930.000-0.3814No
77SNAP25synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]210780.000-0.3837No
78CRTAMcytotoxic and regulatory T cell molecule [Source:HGNC Symbol;Acc:HGNC:24313]212810.000-0.3891No
79FAM153Bfamily with sequence similarity 153 member B [Source:HGNC Symbol;Acc:HGNC:27323]213320.000-0.3905No
80CRYMcrystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]213590.000-0.3912No
81SNAP91synaptosome associated protein 91 [Source:HGNC Symbol;Acc:HGNC:14986]216300.000-0.3985No
82LMO3LIM domain only 3 [Source:HGNC Symbol;Acc:HGNC:6643]217080.000-0.4006No
83ANK3ankyrin 3 [Source:HGNC Symbol;Acc:HGNC:494]220090.000-0.4087No
84ADCY1adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]224320.000-0.4201No
85FGF9fibroblast growth factor 9 [Source:HGNC Symbol;Acc:HGNC:3687]224570.000-0.4208No
86ALDH1A1aldehyde dehydrogenase 1 family member A1 [Source:HGNC Symbol;Acc:HGNC:402]227370.000-0.4283No
87SOBPsine oculis binding protein homolog [Source:HGNC Symbol;Acc:HGNC:29256]230380.000-0.4364No
88SLC6A1solute carrier family 6 member 1 [Source:HGNC Symbol;Acc:HGNC:11042]231280.000-0.4388No
89PLCB1phospholipase C beta 1 [Source:HGNC Symbol;Acc:HGNC:15917]231470.000-0.4393No
90PNMA2PNMA family member 2 [Source:HGNC Symbol;Acc:HGNC:9159]236190.000-0.4521No
91MAGEH1MAGE family member H1 [Source:HGNC Symbol;Acc:HGNC:24092]238670.000-0.4588No
92A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]241310.000-0.4659No
93SLC1A3solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]241870.000-0.4674No
94PLGLAplasminogen like A (pseudogene) [Source:HGNC Symbol;Acc:HGNC:9074]242390.000-0.4687No
95AK5adenylate kinase 5 [Source:HGNC Symbol;Acc:HGNC:365]243750.000-0.4724No
96RCAN2regulator of calcineurin 2 [Source:HGNC Symbol;Acc:HGNC:3041]244140.000-0.4734No
97MAP7microtubule associated protein 7 [Source:HGNC Symbol;Acc:HGNC:6869]245460.000-0.4770No
98GABRA1gamma-aminobutyric acid type A receptor subunit alpha1 [Source:HGNC Symbol;Acc:HGNC:4075]246590.000-0.4800No
99GABRA5gamma-aminobutyric acid type A receptor subunit alpha5 [Source:HGNC Symbol;Acc:HGNC:4079]246620.000-0.4801No
100GABRR2gamma-aminobutyric acid type A receptor subunit rho2 [Source:HGNC Symbol;Acc:HGNC:4091]248030.000-0.4838No
101SCN2Asodium voltage-gated channel alpha subunit 2 [Source:HGNC Symbol;Acc:HGNC:10588]250080.000-0.4894No
102MMP27matrix metallopeptidase 27 [Source:HGNC Symbol;Acc:HGNC:14250]256270.000-0.5061No
103ARPP21cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]257060.000-0.5082No
104PEG3paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]262240.000-0.5222No
105SATB1SATB homeobox 1 [Source:HGNC Symbol;Acc:HGNC:10541]263660.000-0.5260No
106TRILTLR4 interactor with leucine rich repeats [Source:HGNC Symbol;Acc:HGNC:22200]265300.000-0.5304No
107ZNF536zinc finger protein 536 [Source:HGNC Symbol;Acc:HGNC:29025]266650.000-0.5340No
108NRCAMneuronal cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:7994]275810.000-0.5588No
109GRIK2glutamate ionotropic receptor kainate type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4580]28819-0.188-0.5898No
110CPEcarboxypeptidase E [Source:HGNC Symbol;Acc:HGNC:2303]29354-0.328-0.6000No
111CA2carbonic anhydrase 2 [Source:HGNC Symbol;Acc:HGNC:1373]29481-0.362-0.5987No
112SELENOPselenoprotein P [Source:HGNC Symbol;Acc:HGNC:10751]29756-0.431-0.6005No
113ST3GAL6ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18080]30292-0.552-0.6077No
114KIF5Ckinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]30454-0.604-0.6042No
115SCN1Bsodium voltage-gated channel beta subunit 1 [Source:HGNC Symbol;Acc:HGNC:10586]30727-0.691-0.6026No
116TSPAN7tetraspanin 7 [Source:HGNC Symbol;Acc:HGNC:11854]32098-1.136-0.6248Yes
117TMEM100transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]32163-1.163-0.6113Yes
118DUSP6dual specificity phosphatase 6 [Source:HGNC Symbol;Acc:HGNC:3072]32194-1.173-0.5969Yes
119GLDCglycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]33222-1.543-0.6045Yes
120DNM3dynamin 3 [Source:HGNC Symbol;Acc:HGNC:29125]33462-1.650-0.5894Yes
121CDK5R1cyclin dependent kinase 5 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:1775]33510-1.669-0.5689Yes
122TMOD1tropomodulin 1 [Source:HGNC Symbol;Acc:HGNC:11871]33538-1.687-0.5476Yes
123CPceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]33718-1.761-0.5295Yes
124PLP1proteolipid protein 1 [Source:HGNC Symbol;Acc:HGNC:9086]33764-1.787-0.5074Yes
125ANK2ankyrin 2 [Source:HGNC Symbol;Acc:HGNC:493]33915-1.876-0.4870Yes
126GATMglycine amidinotransferase [Source:HGNC Symbol;Acc:HGNC:4175]34239-2.047-0.4690Yes
127GPR19G protein-coupled receptor 19 [Source:HGNC Symbol;Acc:HGNC:4473]34610-2.237-0.4498Yes
128EMP1epithelial membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:3333]34883-2.408-0.4258Yes
129TUBB4Atubulin beta 4A class IVa [Source:HGNC Symbol;Acc:HGNC:20774]35449-2.796-0.4046Yes
130GPNMBglycoprotein nmb [Source:HGNC Symbol;Acc:HGNC:4462]35520-2.863-0.3691Yes
131ATP1A2ATPase Na+/K+ transporting subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:800]35748-3.085-0.3350Yes
132MEF2Cmyocyte enhancer factor 2C [Source:HGNC Symbol;Acc:HGNC:6996]36016-3.353-0.2984Yes
133NRN1neuritin 1 [Source:HGNC Symbol;Acc:HGNC:17972]36237-3.552-0.2580Yes
134SORL1sortilin related receptor 1 [Source:HGNC Symbol;Acc:HGNC:11185]36481-3.844-0.2144Yes
135MAFBMAF bZIP transcription factor B [Source:HGNC Symbol;Acc:HGNC:6408]36630-4.036-0.1658Yes
136METTL7Amethyltransferase like 7A [Source:HGNC Symbol;Acc:HGNC:24550]36692-4.117-0.1137Yes
137TRIM2tripartite motif containing 2 [Source:HGNC Symbol;Acc:HGNC:15974]37004-4.697-0.0608Yes
138SORBS1sorbin and SH3 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14565]37039-4.8340.0014Yes
Table: GSEA details [plain text format]



Fig 2: KRAS.KIDNEY_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.KIDNEY_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.KIDNEY_UP.V1_UP