Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_LPS
GeneSetKRAS.LUNG_UP.V1_UP
Enrichment Score (ES)0.42966244
Normalized Enrichment Score (NES)1.1319219
Nominal p-value0.1097561
FDR q-value0.2433178
FWER p-Value0.838
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.LUNG_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CSF3colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]234.9580.0431Yes
2TNNT2troponin T2, cardiac type [Source:HGNC Symbol;Acc:HGNC:11949]764.7400.0835Yes
3BCL2A1BCL2 related protein A1 [Source:HGNC Symbol;Acc:HGNC:991]1304.4300.1212Yes
4SLC6A4solute carrier family 6 member 4 [Source:HGNC Symbol;Acc:HGNC:11050]1344.4110.1600Yes
5C3AR1complement C3a receptor 1 [Source:HGNC Symbol;Acc:HGNC:1319]2903.8110.1894Yes
6IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]3193.7260.2215Yes
7PRKG2protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]3233.7130.2542Yes
8EVI2Aecotropic viral integration site 2A [Source:HGNC Symbol;Acc:HGNC:3499]3463.6200.2855Yes
9DCBLD2discoidin, CUB and LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24627]3913.5090.3153Yes
10SLC18A1solute carrier family 18 member A1 [Source:HGNC Symbol;Acc:HGNC:10934]7492.7430.3298Yes
11ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]8062.6380.3516Yes
12POLMDNA polymerase mu [Source:HGNC Symbol;Acc:HGNC:9185]8542.5530.3728Yes
13IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]9142.4610.3929Yes
14DOCK4dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:HGNC:19192]15101.7950.3927Yes
15INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]15871.7260.4058Yes
16CD247CD247 molecule [Source:HGNC Symbol;Acc:HGNC:1677]17981.5460.4138Yes
17SH2D2ASH2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:10821]20681.3830.4187Yes
18ZBTB48zinc finger and BTB domain containing 48 [Source:HGNC Symbol;Acc:HGNC:4930]21851.3070.4271Yes
19IKZF1IKAROS family zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:13176]26981.0190.4222Yes
20NDOR1NADPH dependent diflavin oxidoreductase 1 [Source:HGNC Symbol;Acc:HGNC:29838]29760.8950.4226Yes
21ADAM8ADAM metallopeptidase domain 8 [Source:HGNC Symbol;Acc:HGNC:215]30880.8440.4271Yes
22HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]32470.7790.4297Yes
23PCDH17protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]37540.5800.4211No
24FABP3fatty acid binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3557]41240.4730.4153No
25BANK1B cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:HGNC:18233]43910.4730.4122No
26HTR75-hydroxytryptamine receptor 7 [Source:HGNC Symbol;Acc:HGNC:5302]49130.3120.4009No
27FBXO4F-box protein 4 [Source:HGNC Symbol;Acc:HGNC:13583]49670.2940.4021No
28NESnestin [Source:HGNC Symbol;Acc:HGNC:7756]53620.1700.3929No
29ZNF821zinc finger protein 821 [Source:HGNC Symbol;Acc:HGNC:28043]56840.0860.3850No
30RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]57740.0560.3830No
31CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]60320.0000.3761No
32SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]61800.0000.3721No
33CRYAAcrystallin alpha A [Source:HGNC Symbol;Acc:HGNC:2388]63160.0000.3685No
34ASGR2asialoglycoprotein receptor 2 [Source:HGNC Symbol;Acc:HGNC:743]66160.0000.3604No
35RNASE1ribonuclease A family member 1, pancreatic [Source:HGNC Symbol;Acc:HGNC:10044]69140.0000.3523No
36SLCO5A1solute carrier organic anion transporter family member 5A1 [Source:HGNC Symbol;Acc:HGNC:19046]69340.0000.3518No
37FRMD1FERM domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21240]82360.0000.3166No
38GPR3G protein-coupled receptor 3 [Source:HGNC Symbol;Acc:HGNC:4484]91380.0000.2922No
39CLEC4AC-type lectin domain family 4 member A [Source:HGNC Symbol;Acc:HGNC:13257]91680.0000.2914No
40KCNA5potassium voltage-gated channel subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:6224]94310.0000.2843No
41GRIN2Aglutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]100600.0000.2674No
42ADA2adenosine deaminase 2 [Source:HGNC Symbol;Acc:HGNC:1839]108170.0000.2469No
43CCT8L2chaperonin containing TCP1 subunit 8 like 2 [Source:HGNC Symbol;Acc:HGNC:15553]109070.0000.2445No
44N4BP2L2-IT2N4BPL2 intronic transcript 2 [Source:HGNC Symbol;Acc:HGNC:25038]112020.0000.2365No
45TSPAN1tetraspanin 1 [Source:HGNC Symbol;Acc:HGNC:20657]113030.0000.2338No
46PRG3proteoglycan 3, pro eosinophil major basic protein 2 [Source:HGNC Symbol;Acc:HGNC:9363]113090.0000.2337No
47NPHS1NPHS1 adhesion molecule, nephrin [Source:HGNC Symbol;Acc:HGNC:7908]114430.0000.2301No
48SLC6A11solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]116300.0000.2251No
49SIGLEC15sialic acid binding Ig like lectin 15 [Source:HGNC Symbol;Acc:HGNC:27596]116590.0000.2243No
50GBA3glucosylceramidase beta 3 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:19069]125280.0000.2008No
51RBP4retinol binding protein 4 [Source:HGNC Symbol;Acc:HGNC:9922]126750.0000.1969No
52PPP1R14Dprotein phosphatase 1 regulatory inhibitor subunit 14D [Source:HGNC Symbol;Acc:HGNC:14953]128970.0000.1909No
53HOXD11homeobox D11 [Source:HGNC Symbol;Acc:HGNC:5134]130540.0000.1866No
54LILRB1leukocyte immunoglobulin like receptor B1 [Source:HGNC Symbol;Acc:HGNC:6605]132790.0000.1806No
55OR2B6olfactory receptor family 2 subfamily B member 6 [Source:HGNC Symbol;Acc:HGNC:8241]133170.0000.1796No
56KIAA1549LKIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]135370.0000.1737No
57RELNreelin [Source:HGNC Symbol;Acc:HGNC:9957]136680.0000.1701No
58RETNresistin [Source:HGNC Symbol;Acc:HGNC:20389]137880.0000.1669No
59MYH2myosin heavy chain 2 [Source:HGNC Symbol;Acc:HGNC:7572]142240.0000.1551No
60HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]142730.0000.1538No
61RGS4regulator of G protein signaling 4 [Source:HGNC Symbol;Acc:HGNC:10000]146200.0000.1445No
62PAX4paired box 4 [Source:HGNC Symbol;Acc:HGNC:8618]147110.0000.1420No
63BTCbetacellulin [Source:HGNC Symbol;Acc:HGNC:1121]155460.0000.1195No
64G0S2G0/G1 switch 2 [Source:HGNC Symbol;Acc:HGNC:30229]157200.0000.1148No
65IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]158030.0000.1126No
66FUT5fucosyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4016]176830.0000.0617No
67TAS2R1taste 2 receptor member 1 [Source:HGNC Symbol;Acc:HGNC:14909]179560.0000.0544No
68SEMG2semenogelin 2 [Source:HGNC Symbol;Acc:HGNC:10743]183000.0000.0451No
69MT3metallothionein 3 [Source:HGNC Symbol;Acc:HGNC:7408]190930.0000.0236No
70MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]191280.0000.0227No
71NKX2-5NK2 homeobox 5 [Source:HGNC Symbol;Acc:HGNC:2488]192260.0000.0201No
72NGFnerve growth factor [Source:HGNC Symbol;Acc:HGNC:7808]193090.0000.0179No
73MIR124-1HGMIR124-1 host gene [Source:HGNC Symbol;Acc:HGNC:27231]194710.0000.0135No
74CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]194820.0000.0133No
75CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]194960.0000.0129No
76TBX3T-box transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11602]197620.0000.0057No
77CFAP69cilia and flagella associated protein 69 [Source:HGNC Symbol;Acc:HGNC:26107]203030.000-0.0089No
78DEFA5defensin alpha 5 [Source:HGNC Symbol;Acc:HGNC:2764]204220.000-0.0121No
79NELL2neural EGFL like 2 [Source:HGNC Symbol;Acc:HGNC:7751]205000.000-0.0142No
80TSPY1testis specific protein Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:12381]206830.000-0.0191No
81WNT7AWnt family member 7A [Source:HGNC Symbol;Acc:HGNC:12786]210390.000-0.0287No
82ADCYAP1R1ADCYAP receptor type I [Source:HGNC Symbol;Acc:HGNC:242]211870.000-0.0327No
83ALLCallantoicase [Source:HGNC Symbol;Acc:HGNC:17377]212380.000-0.0340No
84LINC00472long intergenic non-protein coding RNA 472 [Source:HGNC Symbol;Acc:HGNC:21380]215830.000-0.0433No
85IFNA8interferon alpha 8 [Source:HGNC Symbol;Acc:HGNC:5429]216460.000-0.0450No
86UGT1A10UDP glucuronosyltransferase family 1 member A10 [Source:HGNC Symbol;Acc:HGNC:12531]219040.000-0.0520No
87PTPRRprotein tyrosine phosphatase receptor type R [Source:HGNC Symbol;Acc:HGNC:9680]220280.000-0.0553No
88ANO1anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]220580.000-0.0561No
89TEX13Atestis expressed 13A [Source:HGNC Symbol;Acc:HGNC:11735]221360.000-0.0582No
90GRIP2glutamate receptor interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:23841]222770.000-0.0620No
91TTC22tetratricopeptide repeat domain 22 [Source:HGNC Symbol;Acc:HGNC:26067]223160.000-0.0630No
92SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]225240.000-0.0686No
93PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]226250.000-0.0713No
94FNDC8fibronectin type III domain containing 8 [Source:HGNC Symbol;Acc:HGNC:25286]229230.000-0.0793No
95ITGA2integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]235380.000-0.0959No
96MAGEA6MAGE family member A6 [Source:HGNC Symbol;Acc:HGNC:6804]238010.000-0.1030No
97TMEM238Ltransmembrane protein 238 like [Source:HGNC Symbol;Acc:HGNC:44356]239550.000-0.1072No
98CELA2Bchymotrypsin like elastase 2B [Source:HGNC Symbol;Acc:HGNC:29995]242100.000-0.1140No
99ADAMTS3ADAM metallopeptidase with thrombospondin type 1 motif 3 [Source:HGNC Symbol;Acc:HGNC:219]247130.000-0.1276No
100IGSF1immunoglobulin superfamily member 1 [Source:HGNC Symbol;Acc:HGNC:5948]253850.000-0.1458No
101MMP20matrix metallopeptidase 20 [Source:HGNC Symbol;Acc:HGNC:7167]256190.000-0.1521No
102ZNF749zinc finger protein 749 [Source:HGNC Symbol;Acc:HGNC:32783]258050.000-0.1571No
103SLC16A8solute carrier family 16 member 8 [Source:HGNC Symbol;Acc:HGNC:16270]261860.000-0.1674No
104KIR2DL3killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 3 [Source:HGNC Symbol;Acc:HGNC:6331]264250.000-0.1738No
105NAV3neuron navigator 3 [Source:HGNC Symbol;Acc:HGNC:15998]272210.000-0.1953No
106CYP2J2cytochrome P450 family 2 subfamily J member 2 [Source:HGNC Symbol;Acc:HGNC:2634]275980.000-0.2055No
107CD1ACD1a molecule [Source:HGNC Symbol;Acc:HGNC:1634]278860.000-0.2133No
108CD48CD48 molecule [Source:HGNC Symbol;Acc:HGNC:1683]279520.000-0.2150No
109CD80CD80 molecule [Source:HGNC Symbol;Acc:HGNC:1700]280160.000-0.2168No
110CYP4F8cytochrome P450 family 4 subfamily F member 8 [Source:HGNC Symbol;Acc:HGNC:2648]28240-0.036-0.2225No
111AKT2AKT serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:392]28441-0.087-0.2271No
112SDCCAG8SHH signaling and ciliogenesis regulator SDCCAG8 [Source:HGNC Symbol;Acc:HGNC:10671]28989-0.235-0.2398No
113NDNFneuron derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:26256]29174-0.274-0.2424No
114ZNF639zinc finger protein 639 [Source:HGNC Symbol;Acc:HGNC:30950]29222-0.290-0.2411No
115CLSTN3calsyntenin 3 [Source:HGNC Symbol;Acc:HGNC:18371]29390-0.337-0.2427No
116LRIG1leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]29401-0.340-0.2399No
117ZBTB44zinc finger and BTB domain containing 44 [Source:HGNC Symbol;Acc:HGNC:25001]29694-0.415-0.2442No
118LAG3lymphocyte activating 3 [Source:HGNC Symbol;Acc:HGNC:6476]30040-0.510-0.2490No
119ST3GAL6ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18080]30292-0.552-0.2509No
120KIF5Ckinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]30454-0.604-0.2500No
121HPNhepsin [Source:HGNC Symbol;Acc:HGNC:5155]30653-0.670-0.2494No
122TMEM176Btransmembrane protein 176B [Source:HGNC Symbol;Acc:HGNC:29596]30835-0.721-0.2480No
123DOCK2dedicator of cytokinesis 2 [Source:HGNC Symbol;Acc:HGNC:2988]31958-1.079-0.2688No
124OGDHLoxoglutarate dehydrogenase like [Source:HGNC Symbol;Acc:HGNC:25590]32286-1.215-0.2669No
125TMEM158transmembrane protein 158 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:30293]32513-1.234-0.2622No
126JAK3Janus kinase 3 [Source:HGNC Symbol;Acc:HGNC:6193]32716-1.328-0.2559No
127ATG10autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]33624-1.735-0.2652No
128B3GNTL1UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]33719-1.761-0.2522No
129ABCB1ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]34305-2.081-0.2497No
130SLCO4A1solute carrier organic anion transporter family member 4A1 [Source:HGNC Symbol;Acc:HGNC:10953]34522-2.177-0.2363No
131SARM1sterile alpha and TIR motif containing 1 [Source:HGNC Symbol;Acc:HGNC:17074]34817-2.364-0.2234No
132ANGPTL4angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]35023-2.508-0.2068No
133NRP1neuropilin 1 [Source:HGNC Symbol;Acc:HGNC:8004]35599-2.946-0.1964No
134EGFL7EGF like domain multiple 7 [Source:HGNC Symbol;Acc:HGNC:20594]36098-3.435-0.1796No
135CYTIPcytohesin 1 interacting protein [Source:HGNC Symbol;Acc:HGNC:9506]36131-3.463-0.1499No
136AURKCaurora kinase C [Source:HGNC Symbol;Acc:HGNC:11391]36266-3.593-0.1218No
137HS3ST3A1heparan sulfate-glucosamine 3-sulfotransferase 3A1 [Source:HGNC Symbol;Acc:HGNC:5196]36403-3.755-0.0924No
138LDB3LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710]36485-3.853-0.0606No
139CX3CR1C-X3-C motif chemokine receptor 1 [Source:HGNC Symbol;Acc:HGNC:2558]36755-4.201-0.0308No
140HROBhomologous recombination factor with OB-fold [Source:HGNC Symbol;Acc:HGNC:28460]36935-4.5170.0042No
Table: GSEA details [plain text format]



Fig 2: KRAS.LUNG_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.LUNG_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.LUNG_UP.V1_UP