Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_LPS
GeneSetWNT_UP.V1_DN
Enrichment Score (ES)0.40461433
Normalized Enrichment Score (NES)1.0947552
Nominal p-value0.11363637
FDR q-value0.3052012
FWER p-Value0.923
Table: GSEA Results Summary



Fig 1: Enrichment plot: WNT_UP.V1_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]264.9530.0246Yes
2GBP4guanylate binding protein 4 [Source:HGNC Symbol;Acc:HGNC:20480]324.9310.0496Yes
3CMPK2cytidine/uridine monophosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:27015]604.8190.0735Yes
4USP18ubiquitin specific peptidase 18 [Source:HGNC Symbol;Acc:HGNC:12616]974.6350.0962Yes
5IRF7interferon regulatory factor 7 [Source:HGNC Symbol;Acc:HGNC:6122]1014.6170.1197Yes
6IFIH1interferon induced with helicase C domain 1 [Source:HGNC Symbol;Acc:HGNC:18873]1264.4460.1418Yes
7ABCA1ATP binding cassette subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:29]1874.1980.1616Yes
8EIF2AK2eukaryotic translation initiation factor 2 alpha kinase 2 [Source:HGNC Symbol;Acc:HGNC:9437]2284.0360.1811Yes
9OAS12'-5'-oligoadenylate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:8086]3073.7810.1983Yes
10CDO1cysteine dioxygenase type 1 [Source:HGNC Symbol;Acc:HGNC:1795]4413.3130.2116Yes
11CLEC4DC-type lectin domain family 4 member D [Source:HGNC Symbol;Acc:HGNC:14554]4423.3100.2285Yes
12PIM2Pim-2 proto-oncogene, serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:8987]4783.2760.2443Yes
13KCND1potassium voltage-gated channel subfamily D member 1 [Source:HGNC Symbol;Acc:HGNC:6237]5383.1380.2587Yes
14CD44CD44 molecule (Indian blood group) [Source:HGNC Symbol;Acc:HGNC:1681]5433.1300.2746Yes
15LGALS3BPgalectin 3 binding protein [Source:HGNC Symbol;Acc:HGNC:6564]5563.0950.2901Yes
16PCDH7protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]5952.9970.3043Yes
17CD79BCD79b molecule [Source:HGNC Symbol;Acc:HGNC:1699]8182.6190.3117Yes
18IRF9interferon regulatory factor 9 [Source:HGNC Symbol;Acc:HGNC:6131]8412.5860.3243Yes
19ADARadenosine deaminase RNA specific [Source:HGNC Symbol;Acc:HGNC:225]8422.5840.3375Yes
20CLN3CLN3 lysosomal/endosomal transmembrane protein, battenin [Source:HGNC Symbol;Acc:HGNC:2074]10192.2840.3444Yes
21ISG15ISG15 ubiquitin like modifier [Source:HGNC Symbol;Acc:HGNC:4053]10252.2760.3559Yes
22TLR6toll like receptor 6 [Source:HGNC Symbol;Acc:HGNC:16711]11142.1490.3645Yes
23NEO1neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]11152.1480.3755Yes
24ACVR1Bactivin A receptor type 1B [Source:HGNC Symbol;Acc:HGNC:172]15031.8040.3742Yes
25GFAPglial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]15961.7190.3805Yes
26DNASE1L3deoxyribonuclease 1 like 3 [Source:HGNC Symbol;Acc:HGNC:2959]18261.5260.3821Yes
27TAL2TAL bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11557]18861.4760.3880Yes
28HLA-Amajor histocompatibility complex, class I, A [Source:HGNC Symbol;Acc:HGNC:4931]20221.4140.3916Yes
29METMET proto-oncogene, receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:7029]20371.4050.3984Yes
30SH2D2ASH2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:10821]20681.3830.4046Yes
31ADCY4adenylate cyclase 4 [Source:HGNC Symbol;Acc:HGNC:235]25591.1040.3970No
32PIGNphosphatidylinositol glycan anchor biosynthesis class N [Source:HGNC Symbol;Acc:HGNC:8967]28620.9440.3936No
33DNAJC11DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]30900.8430.3918No
34PHOSPHO2phosphatase, orphan 2 [Source:HGNC Symbol;Acc:HGNC:28316]34120.7110.3867No
35MAK16MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]36700.6110.3829No
36NSMFNMDA receptor synaptonuclear signaling and neuronal migration factor [Source:HGNC Symbol;Acc:HGNC:29843]37590.5780.3834No
37CYTH1cytohesin 1 [Source:HGNC Symbol;Acc:HGNC:9501]37910.5650.3855No
38CYBAcytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]38130.5580.3878No
39GPATCH2G-patch domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25499]38670.5360.3891No
40MAP3K2mitogen-activated protein kinase kinase kinase 2 [Source:HGNC Symbol;Acc:HGNC:6854]38920.5240.3911No
41CELF1CUGBP Elav-like family member 1 [Source:HGNC Symbol;Acc:HGNC:2549]39240.5140.3929No
42SDSLserine dehydratase like [Source:HGNC Symbol;Acc:HGNC:30404]39930.4910.3936No
43PXMP2peroxisomal membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:9716]40470.4740.3945No
44EFNB2ephrin B2 [Source:HGNC Symbol;Acc:HGNC:3227]40550.4740.3968No
45TNFRSF8TNF receptor superfamily member 8 [Source:HGNC Symbol;Acc:HGNC:11923]46240.4010.3834No
46FOXN3forkhead box N3 [Source:HGNC Symbol;Acc:HGNC:1928]47560.3590.3817No
47UBR1ubiquitin protein ligase E3 component n-recognin 1 [Source:HGNC Symbol;Acc:HGNC:16808]48850.3210.3799No
48PTPN22protein tyrosine phosphatase non-receptor type 22 [Source:HGNC Symbol;Acc:HGNC:9652]50230.2700.3776No
49PCDHA10protocadherin alpha 10 [Source:HGNC Symbol;Acc:HGNC:8664]50810.2490.3773No
50VEGFAvascular endothelial growth factor A [Source:HGNC Symbol;Acc:HGNC:12680]51840.2180.3756No
51TSPAN5tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]53410.1760.3723No
52SERGEFsecretion regulating guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:17499]58220.0400.3595No
53PRH1proline rich protein HaeIII subfamily 1 [Source:HGNC Symbol;Acc:HGNC:9366]59640.0000.3557No
54KRTAP3-1keratin associated protein 3-1 [Source:HGNC Symbol;Acc:HGNC:16778]60650.0000.3530No
55APC2APC regulator of WNT signaling pathway 2 [Source:HGNC Symbol;Acc:HGNC:24036]63130.0000.3463No
56HES3hes family bHLH transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:26226]68710.0000.3312No
57HEY1hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]69710.0000.3285No
58ADAM2ADAM metallopeptidase domain 2 [Source:HGNC Symbol;Acc:HGNC:198]86090.0000.2842No
59TNFRSF21TNF receptor superfamily member 21 [Source:HGNC Symbol;Acc:HGNC:13469]89780.0000.2742No
60C16orf89chromosome 16 open reading frame 89 [Source:HGNC Symbol;Acc:HGNC:28687]89990.0000.2737No
61GPX3glutathione peroxidase 3 [Source:HGNC Symbol;Acc:HGNC:4555]91950.0000.2684No
62KCNA2potassium voltage-gated channel subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:6220]94250.0000.2622No
63KCNA4potassium voltage-gated channel subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:6222]94290.0000.2621No
64ADAM19ADAM metallopeptidase domain 19 [Source:HGNC Symbol;Acc:HGNC:197]96530.0000.2561No
65ADAM12ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]96550.0000.2561No
66GRM8glutamate metabotropic receptor 8 [Source:HGNC Symbol;Acc:HGNC:4600]96930.0000.2550No
67SPRR2Bsmall proline rich protein 2B [Source:HGNC Symbol;Acc:HGNC:11262]99180.0000.2490No
68GSTA4glutathione S-transferase alpha 4 [Source:HGNC Symbol;Acc:HGNC:4629]99650.0000.2477No
69NGEFneuronal guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:7807]100580.0000.2452No
70GRIN2Cglutamate ionotropic receptor NMDA type subunit 2C [Source:HGNC Symbol;Acc:HGNC:4587]100740.0000.2448No
71AARDalanine and arginine rich domain containing protein [Source:HGNC Symbol;Acc:HGNC:33842]101770.0000.2421No
72TBXA2Rthromboxane A2 receptor [Source:HGNC Symbol;Acc:HGNC:11608]104080.0000.2358No
73ACKR1atypical chemokine receptor 1 (Duffy blood group) [Source:HGNC Symbol;Acc:HGNC:4035]108600.0000.2236No
74PLA2G10phospholipase A2 group X [Source:HGNC Symbol;Acc:HGNC:9029]113690.0000.2099No
75PLA2G1Bphospholipase A2 group IB [Source:HGNC Symbol;Acc:HGNC:9030]114220.0000.2085No
76IGFBP6insulin like growth factor binding protein 6 [Source:HGNC Symbol;Acc:HGNC:5475]115730.0000.2044No
77RAI2retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]123510.0000.1834No
78THBDthrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784]125080.0000.1791No
79HAND1heart and neural crest derivatives expressed 1 [Source:HGNC Symbol;Acc:HGNC:4807]135280.0000.1515No
80RASD1ras related dexamethasone induced 1 [Source:HGNC Symbol;Acc:HGNC:15828]142360.0000.1324No
81MYOGmyogenin [Source:HGNC Symbol;Acc:HGNC:7612]142960.0000.1308No
82PCP2Purkinje cell protein 2 [Source:HGNC Symbol;Acc:HGNC:30209]153440.0000.1024No
83SYNGR4synaptogyrin 4 [Source:HGNC Symbol;Acc:HGNC:11502]153800.0000.1015No
84BIKBCL2 interacting killer [Source:HGNC Symbol;Acc:HGNC:1051]154590.0000.0994No
85G0S2G0/G1 switch 2 [Source:HGNC Symbol;Acc:HGNC:30229]157200.0000.0923No
86DIO2iodothyronine deiodinase 2 [Source:HGNC Symbol;Acc:HGNC:2884]157320.0000.0920No
87HLA-DMBmajor histocompatibility complex, class II, DM beta [Source:HGNC Symbol;Acc:HGNC:4935]160880.0000.0824No
88F10coagulation factor X [Source:HGNC Symbol;Acc:HGNC:3528]163870.0000.0743No
89CFHR1complement factor H related 1 [Source:HGNC Symbol;Acc:HGNC:4888]168900.0000.0607No
90PPP1R1Aprotein phosphatase 1 regulatory inhibitor subunit 1A [Source:HGNC Symbol;Acc:HGNC:9286]176090.0000.0413No
91ADRB1adrenoceptor beta 1 [Source:HGNC Symbol;Acc:HGNC:285]179250.0000.0328No
92HLA-DRB1major histocompatibility complex, class II, DR beta 1 [Source:HGNC Symbol;Acc:HGNC:4948]180720.0000.0288No
93LBPlipopolysaccharide binding protein [Source:HGNC Symbol;Acc:HGNC:6517]185030.0000.0172No
94LHBluteinizing hormone subunit beta [Source:HGNC Symbol;Acc:HGNC:6584]185980.0000.0146No
95COL9A1collagen type IX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2217]190020.0000.0037No
96MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]191320.0000.0002No
97NGFnerve growth factor [Source:HGNC Symbol;Acc:HGNC:7808]193090.000-0.0046No
98IL12RB1interleukin 12 receptor subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:5971]196590.000-0.0140No
99GABRG2gamma-aminobutyric acid type A receptor subunit gamma2 [Source:HGNC Symbol;Acc:HGNC:4087]199300.000-0.0213No
100LHX1LIM homeobox 1 [Source:HGNC Symbol;Acc:HGNC:6593]200940.000-0.0257No
101MEP1Ameprin A subunit alpha [Source:HGNC Symbol;Acc:HGNC:7015]201250.000-0.0265No
102CORTcortistatin [Source:HGNC Symbol;Acc:HGNC:2257]202640.000-0.0303No
103AIREautoimmune regulator [Source:HGNC Symbol;Acc:HGNC:360]203000.000-0.0312No
104LAMA1laminin subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:6481]206340.000-0.0402No
105CNTN1contactin 1 [Source:HGNC Symbol;Acc:HGNC:2171]223090.000-0.0856No
106OCLNoccludin [Source:HGNC Symbol;Acc:HGNC:8104]232540.000-0.1112No
107CASQ2calsequestrin 2 [Source:HGNC Symbol;Acc:HGNC:1513]239230.000-0.1292No
108SLC1A6solute carrier family 1 member 6 [Source:HGNC Symbol;Acc:HGNC:10944]241880.000-0.1364No
109AGTangiotensinogen [Source:HGNC Symbol;Acc:HGNC:333]243060.000-0.1396No
110HDGFL1HDGF like 1 [Source:HGNC Symbol;Acc:HGNC:21095]246190.000-0.1480No
111RAMP3receptor activity modifying protein 3 [Source:HGNC Symbol;Acc:HGNC:9845]250310.000-0.1591No
112MRAPmelanocortin 2 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:1304]252240.000-0.1643No
113TFR2transferrin receptor 2 [Source:HGNC Symbol;Acc:HGNC:11762]255850.000-0.1741No
114TSHBthyroid stimulating hormone subunit beta [Source:HGNC Symbol;Acc:HGNC:12372]268880.000-0.2094No
115GGNBP1gametogenetin binding protein 1 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:19427]271090.000-0.2153No
116CD48CD48 molecule [Source:HGNC Symbol;Acc:HGNC:1683]279520.000-0.2381No
117CD93CD93 molecule [Source:HGNC Symbol;Acc:HGNC:15855]280200.000-0.2399No
118DDX25DEAD-box helicase 25 [Source:HGNC Symbol;Acc:HGNC:18698]280470.000-0.2406No
119TGFBR3transforming growth factor beta receptor 3 [Source:HGNC Symbol;Acc:HGNC:11774]280980.000-0.2420No
120DDX46DEAD-box helicase 46 [Source:HGNC Symbol;Acc:HGNC:18681]28554-0.119-0.2537No
121MAPK7mitogen-activated protein kinase 7 [Source:HGNC Symbol;Acc:HGNC:6880]28610-0.136-0.2545No
122STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]28887-0.203-0.2610No
123KDM5Alysine demethylase 5A [Source:HGNC Symbol;Acc:HGNC:9886]28984-0.233-0.2624No
124CD5CD5 molecule [Source:HGNC Symbol;Acc:HGNC:1685]29080-0.245-0.2637No
125CCDC130coiled-coil domain containing 130 [Source:HGNC Symbol;Acc:HGNC:28118]29733-0.425-0.2792No
126CPN1carboxypeptidase N subunit 1 [Source:HGNC Symbol;Acc:HGNC:2312]29748-0.429-0.2774No
127SINHCAFSIN3-HDAC complex associated factor [Source:HGNC Symbol;Acc:HGNC:30702]29792-0.440-0.2763No
128NAGKN-acetylglucosamine kinase [Source:HGNC Symbol;Acc:HGNC:17174]30513-0.627-0.2926No
129TRAPPC5trafficking protein particle complex 5 [Source:HGNC Symbol;Acc:HGNC:23067]30931-0.747-0.3001No
130PLXNA1plexin A1 [Source:HGNC Symbol;Acc:HGNC:9099]31026-0.781-0.2986No
131KCNA3potassium voltage-gated channel subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:6221]31113-0.796-0.2969No
132FBXO8F-box protein 8 [Source:HGNC Symbol;Acc:HGNC:13587]31496-0.916-0.3026No
133ASH2LASH2 like, histone lysine methyltransferase complex subunit [Source:HGNC Symbol;Acc:HGNC:744]31680-0.984-0.3025No
134AKR1E2aldo-keto reductase family 1 member E2 [Source:HGNC Symbol;Acc:HGNC:23437]31743-1.005-0.2990No
135TUSC2tumor suppressor 2, mitochondrial calcium regulator [Source:HGNC Symbol;Acc:HGNC:17034]32019-1.100-0.3009No
136CMBLcarboxymethylenebutenolidase homolog [Source:HGNC Symbol;Acc:HGNC:25090]32248-1.197-0.3009No
137RSPH1radial spoke head component 1 [Source:HGNC Symbol;Acc:HGNC:12371]32405-1.232-0.2989No
138CSF2RBcolony stimulating factor 2 receptor subunit beta [Source:HGNC Symbol;Acc:HGNC:2436]32523-1.236-0.2957No
139NMT2N-myristoyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:7858]32579-1.259-0.2908No
140VPREB1V-set pre-B cell surrogate light chain 1 [Source:HGNC Symbol;Acc:HGNC:12709]32782-1.354-0.2893No
141CEACAM1CEA cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:1814]33142-1.505-0.2914No
142TGFBR1transforming growth factor beta receptor 1 [Source:HGNC Symbol;Acc:HGNC:11772]33495-1.662-0.2924No
143BPGMbisphosphoglycerate mutase [Source:HGNC Symbol;Acc:HGNC:1093]33552-1.693-0.2853No
144DPF3double PHD fingers 3 [Source:HGNC Symbol;Acc:HGNC:17427]33792-1.803-0.2826No
145VIMvimentin [Source:HGNC Symbol;Acc:HGNC:12692]33910-1.872-0.2762No
146SLC22A18solute carrier family 22 member 18 [Source:HGNC Symbol;Acc:HGNC:10964]34119-1.979-0.2717No
147STK11IPserine/threonine kinase 11 interacting protein [Source:HGNC Symbol;Acc:HGNC:19184]34230-2.041-0.2642No
148HOXB5homeobox B5 [Source:HGNC Symbol;Acc:HGNC:5116]34406-2.127-0.2581No
149DNAJC4DnaJ heat shock protein family (Hsp40) member C4 [Source:HGNC Symbol;Acc:HGNC:5271]34624-2.247-0.2525No
150HDHD5haloacid dehalogenase like hydrolase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:1843]34870-2.401-0.2469No
151KITLGKIT ligand [Source:HGNC Symbol;Acc:HGNC:6343]35000-2.488-0.2377No
152HSD3B7hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 [Source:HGNC Symbol;Acc:HGNC:18324]35236-2.675-0.2304No
153VWA7von Willebrand factor A domain containing 7 [Source:HGNC Symbol;Acc:HGNC:13939]35277-2.679-0.2178No
154ST3GAL2ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:10863]35338-2.713-0.2056No
155ATP7BATPase copper transporting beta [Source:HGNC Symbol;Acc:HGNC:870]35355-2.723-0.1921No
156ETV4ETS variant transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:3493]35424-2.774-0.1798No
157OLFM1olfactomedin 1 [Source:HGNC Symbol;Acc:HGNC:17187]35435-2.783-0.1658No
158TANC1tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:29364]35462-2.805-0.1522No
159LSRlipolysis stimulated lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:29572]35554-2.890-0.1399No
160SYT11synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]35658-3.026-0.1273No
161TNNI3troponin I3, cardiac type [Source:HGNC Symbol;Acc:HGNC:11947]35674-3.047-0.1121No
162FAAHfatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]35895-3.253-0.1014No
163NCOA2nuclear receptor coactivator 2 [Source:HGNC Symbol;Acc:HGNC:7669]36002-3.338-0.0873No
164ABCC3ATP binding cassette subfamily C member 3 [Source:HGNC Symbol;Acc:HGNC:54]36165-3.495-0.0738No
165NT5DC25'-nucleotidase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25717]36245-3.570-0.0577No
166NFATC2nuclear factor of activated T cells 2 [Source:HGNC Symbol;Acc:HGNC:7776]36253-3.583-0.0396No
167SYT8synaptotagmin 8 [Source:HGNC Symbol;Acc:HGNC:19264]36356-3.687-0.0235No
168ST6GALNAC6ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:23364]36544-3.927-0.0086No
169FZD7frizzled class receptor 7 [Source:HGNC Symbol;Acc:HGNC:4045]36953-4.5670.0037No
Table: GSEA details [plain text format]



Fig 2: WNT_UP.V1_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: WNT_UP.V1_DN: Random ES distribution   
Gene set null distribution of ES for WNT_UP.V1_DN