Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetFAN_EMBRYONIC_CTX_MICROGLIA_1
Enrichment Score (ES)-0.8309831
Normalized Enrichment Score (NES)-1.7875689
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: FAN_EMBRYONIC_CTX_MICROGLIA_1   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CDK2AP2cyclin dependent kinase 2 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:30833]8202.618-0.0163No
2RHEBRas homolog, mTORC1 binding [Source:HGNC Symbol;Acc:HGNC:10011]13981.919-0.0276No
3HERC5HECT and RLD domain containing E3 ubiquitin protein ligase 5 [Source:HGNC Symbol;Acc:HGNC:24368]15621.752-0.0281No
4EVI2Becotropic viral integration site 2B [Source:HGNC Symbol;Acc:HGNC:3500]24011.188-0.0481No
5CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]33450.744-0.0720No
6SRSF3serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]45510.424-0.1037No
7SRSF10serine and arginine rich splicing factor 10 [Source:HGNC Symbol;Acc:HGNC:16713]56360.097-0.1328No
8DDX39ADExD-box helicase 39A [Source:HGNC Symbol;Acc:HGNC:17821]57500.065-0.1357No
9H4C3H4 clustered histone 3 [Source:HGNC Symbol;Acc:HGNC:4787]98950.000-0.2479No
10C21orf58chromosome 21 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:1300]104890.000-0.2640No
11AC091057.1OTU deubiquitinase 7A pseudogene [Source:NCBI gene (formerly Entrezgene);Acc:100288637]126290.000-0.3219No
12ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]232530.000-0.6095No
13H1-3H1.3 linker histone, cluster member [Source:HGNC Symbol;Acc:HGNC:4717]276640.000-0.7289No
14RPS27Lribosomal protein S27 like [Source:HGNC Symbol;Acc:HGNC:18476]29454-0.355-0.7765No
15CKLFchemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]30018-0.505-0.7906No
16CENPWcentromere protein W [Source:HGNC Symbol;Acc:HGNC:21488]30192-0.537-0.7941No
17ANP32Eacidic nuclear phosphoprotein 32 family member E [Source:HGNC Symbol;Acc:HGNC:16673]30436-0.597-0.7993No
18CDC27cell division cycle 27 [Source:HGNC Symbol;Acc:HGNC:1728]30661-0.672-0.8039No
19ANAPC11anaphase promoting complex subunit 11 [Source:HGNC Symbol;Acc:HGNC:14452]30989-0.765-0.8110No
20CENPCcentromere protein C [Source:HGNC Symbol;Acc:HGNC:1854]31024-0.780-0.8102No
21BUB3BUB3 mitotic checkpoint protein [Source:HGNC Symbol;Acc:HGNC:1151]31616-0.962-0.8240No
22ARL6IP1ADP ribosylation factor like GTPase 6 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:697]31676-0.982-0.8234No
23NUCKS1nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]31817-1.029-0.8249No
24GGHgamma-glutamyl hydrolase [Source:HGNC Symbol;Acc:HGNC:4248]31978-1.085-0.8268No
25CNTRLcentriolin [Source:HGNC Symbol;Acc:HGNC:1858]32099-1.137-0.8275Yes
26GLAgalactosidase alpha [Source:HGNC Symbol;Acc:HGNC:4296]32188-1.171-0.8273Yes
27PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]32234-1.194-0.8258Yes
28BRCA2BRCA2 DNA repair associated [Source:HGNC Symbol;Acc:HGNC:1101]32235-1.194-0.8231Yes
29ITGB3BPintegrin subunit beta 3 binding protein [Source:HGNC Symbol;Acc:HGNC:6157]32316-1.229-0.8225Yes
30CENPNcentromere protein N [Source:HGNC Symbol;Acc:HGNC:30873]32570-1.255-0.8266Yes
31PTTG1PTTG1 regulator of sister chromatid separation, securin [Source:HGNC Symbol;Acc:HGNC:9690]32691-1.316-0.8269Yes
32HJURPHolliday junction recognition protein [Source:HGNC Symbol;Acc:HGNC:25444]32737-1.335-0.8251Yes
33FAM111Afamily with sequence similarity 111 member A [Source:HGNC Symbol;Acc:HGNC:24725]32781-1.353-0.8232Yes
34CEP152centrosomal protein 152 [Source:HGNC Symbol;Acc:HGNC:29298]32847-1.373-0.8219Yes
35POLQDNA polymerase theta [Source:HGNC Symbol;Acc:HGNC:9186]32951-1.424-0.8215Yes
36CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]33303-1.578-0.8274Yes
37TUBB4Btubulin beta 4B class IVb [Source:HGNC Symbol;Acc:HGNC:20771]33365-1.603-0.8255Yes
38MZT1mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]33443-1.638-0.8239Yes
39MRPL18mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]33604-1.724-0.8244Yes
40SMC1Astructural maintenance of chromosomes 1A [Source:HGNC Symbol;Acc:HGNC:11111]33619-1.732-0.8209Yes
41KPNA2karyopherin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6395]33683-1.743-0.8186Yes
42HP1BP3heterochromatin protein 1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:24973]33850-1.835-0.8190Yes
43H2AZ1H2A.Z variant histone 1 [Source:HGNC Symbol;Acc:HGNC:4741]34044-1.937-0.8199Yes
44CKAP5cytoskeleton associated protein 5 [Source:HGNC Symbol;Acc:HGNC:28959]34140-1.987-0.8180Yes
45HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]34287-2.069-0.8173Yes
46MND1meiotic nuclear divisions 1 [Source:HGNC Symbol;Acc:HGNC:24839]34529-2.183-0.8189Yes
47CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]34580-2.221-0.8153Yes
48KIF20Bkinesin family member 20B [Source:HGNC Symbol;Acc:HGNC:7212]34682-2.278-0.8129Yes
49DIAPH3diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]34754-2.318-0.8097Yes
50RAD21RAD21 cohesin complex component [Source:HGNC Symbol;Acc:HGNC:9811]34850-2.390-0.8069Yes
51PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]34858-2.395-0.8017Yes
52CENPUcentromere protein U [Source:HGNC Symbol;Acc:HGNC:21348]34869-2.401-0.7966Yes
53NCAPG2non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]34889-2.412-0.7917Yes
54CITcitron rho-interacting serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1985]34897-2.420-0.7864Yes
55DEKDEK proto-oncogene [Source:HGNC Symbol;Acc:HGNC:2768]34944-2.441-0.7822Yes
56TMEM106Ctransmembrane protein 106C [Source:HGNC Symbol;Acc:HGNC:28775]35019-2.504-0.7786Yes
57SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35087-2.553-0.7746Yes
58DTYMKdeoxythymidylate kinase [Source:HGNC Symbol;Acc:HGNC:3061]35322-2.698-0.7749Yes
59CENPMcentromere protein M [Source:HGNC Symbol;Acc:HGNC:18352]35351-2.722-0.7696Yes
60EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]35361-2.726-0.7637Yes
61SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]35393-2.750-0.7584Yes
62TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]35409-2.763-0.7526Yes
63ARHGAP11ARho GTPase activating protein 11A [Source:HGNC Symbol;Acc:HGNC:15783]35522-2.864-0.7492Yes
64DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35546-2.882-0.7433Yes
65TTF2transcription termination factor 2 [Source:HGNC Symbol;Acc:HGNC:12398]35571-2.915-0.7374Yes
66TUBA1Ctubulin alpha 1c [Source:HGNC Symbol;Acc:HGNC:20768]35615-2.965-0.7319Yes
67MAD2L1mitotic arrest deficient 2 like 1 [Source:HGNC Symbol;Acc:HGNC:6763]35623-2.974-0.7255Yes
68FBXO5F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]35655-3.023-0.7195Yes
69TACC3transforming acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:HGNC:11524]35721-3.059-0.7144Yes
70PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]35722-3.059-0.7075Yes
71ATAD2ATPase family AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]35756-3.093-0.7015Yes
72TCF19transcription factor 19 [Source:HGNC Symbol;Acc:HGNC:11629]35779-3.118-0.6951Yes
73UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]35837-3.176-0.6895Yes
74IQGAP3IQ motif containing GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:20669]35851-3.186-0.6827Yes
75NCAPGnon-SMC condensin I complex subunit G [Source:HGNC Symbol;Acc:HGNC:24304]35853-3.190-0.6756Yes
76ATAD5ATPase family AAA domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25752]35910-3.273-0.6697Yes
77CKAP2cytoskeleton associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1990]35926-3.289-0.6628Yes
78SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]35958-3.323-0.6561Yes
79KNL1kinetochore scaffold 1 [Source:HGNC Symbol;Acc:HGNC:24054]36014-3.351-0.6501Yes
80CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]36019-3.358-0.6427Yes
81PBKPDZ binding kinase [Source:HGNC Symbol;Acc:HGNC:18282]36027-3.367-0.6353Yes
82TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36054-3.383-0.6284Yes
83SIVA1SIVA1 apoptosis inducing factor [Source:HGNC Symbol;Acc:HGNC:17712]36069-3.397-0.6212Yes
84FANCD2FA complementation group D2 [Source:HGNC Symbol;Acc:HGNC:3585]36074-3.406-0.6136Yes
85PHF19PHD finger protein 19 [Source:HGNC Symbol;Acc:HGNC:24566]36077-3.411-0.6060Yes
86SGO2shugoshin 2 [Source:HGNC Symbol;Acc:HGNC:30812]36079-3.411-0.5984Yes
87TMPOthymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]36086-3.421-0.5909Yes
88BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]36096-3.434-0.5834Yes
89KIF23kinesin family member 23 [Source:HGNC Symbol;Acc:HGNC:6392]36101-3.440-0.5758Yes
90KIF20Akinesin family member 20A [Source:HGNC Symbol;Acc:HGNC:9787]36110-3.445-0.5683Yes
91AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]36154-3.490-0.5616Yes
92CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]36163-3.495-0.5540Yes
93CCNFcyclin F [Source:HGNC Symbol;Acc:HGNC:1591]36167-3.496-0.5462Yes
94BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36172-3.498-0.5385Yes
95MXD3MAX dimerization protein 3 [Source:HGNC Symbol;Acc:HGNC:14008]36187-3.520-0.5310Yes
96H2AC17H2A clustered histone 17 [Source:HGNC Symbol;Acc:HGNC:4735]36249-3.575-0.5246Yes
97CKAP2Lcytoskeleton associated protein 2 like [Source:HGNC Symbol;Acc:HGNC:26877]36259-3.585-0.5168Yes
98UBE2Tubiquitin conjugating enzyme E2 T [Source:HGNC Symbol;Acc:HGNC:25009]36288-3.614-0.5094Yes
99SGO1shugoshin 1 [Source:HGNC Symbol;Acc:HGNC:25088]36304-3.637-0.5017Yes
100ASF1Banti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]36324-3.663-0.4940Yes
101RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]36360-3.688-0.4867Yes
102SPAG5sperm associated antigen 5 [Source:HGNC Symbol;Acc:HGNC:13452]36366-3.704-0.4785Yes
103KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]36388-3.732-0.4707Yes
104CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]36393-3.744-0.4624Yes
105BARD1BRCA1 associated RING domain 1 [Source:HGNC Symbol;Acc:HGNC:952]36416-3.776-0.4545Yes
106NCAPD2non-SMC condensin I complex subunit D2 [Source:HGNC Symbol;Acc:HGNC:24305]36460-3.819-0.4471Yes
107CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]36469-3.830-0.4387Yes
108DEPDC1DEP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22949]36474-3.838-0.4302Yes
109CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]36488-3.857-0.4219Yes
110KIF15kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]36511-3.893-0.4137Yes
111HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]36512-3.898-0.4050Yes
112KIF14kinesin family member 14 [Source:HGNC Symbol;Acc:HGNC:19181]36518-3.905-0.3964Yes
113NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36519-3.907-0.3876Yes
114KIF18Bkinesin family member 18B [Source:HGNC Symbol;Acc:HGNC:27102]36526-3.918-0.3790Yes
115NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36576-3.975-0.3714Yes
116PRR11proline rich 11 [Source:HGNC Symbol;Acc:HGNC:25619]36581-3.976-0.3626Yes
117ANLNanillin actin binding protein [Source:HGNC Symbol;Acc:HGNC:14082]36582-3.982-0.3536Yes
118AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36589-3.996-0.3448Yes
119PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36590-3.998-0.3358Yes
120H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36591-3.999-0.3269Yes
121BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]36605-4.013-0.3182Yes
122CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36606-4.015-0.3092Yes
123PIMREGPICALM interacting mitotic regulator [Source:HGNC Symbol;Acc:HGNC:25483]36627-4.035-0.3007Yes
124PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]36660-4.066-0.2924Yes
125KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36668-4.079-0.2835Yes
126CDKN2Ccyclin dependent kinase inhibitor 2C [Source:HGNC Symbol;Acc:HGNC:1789]36685-4.099-0.2747Yes
127CEP55centrosomal protein 55 [Source:HGNC Symbol;Acc:HGNC:1161]36703-4.132-0.2659Yes
128CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36709-4.137-0.2567Yes
129H2AZ2H2A.Z variant histone 2 [Source:HGNC Symbol;Acc:HGNC:20664]36713-4.143-0.2475Yes
130TROAPtrophinin associated protein [Source:HGNC Symbol;Acc:HGNC:12327]36730-4.155-0.2386Yes
131KIF22kinesin family member 22 [Source:HGNC Symbol;Acc:HGNC:6391]36747-4.186-0.2296Yes
132CCDC18coiled-coil domain containing 18 [Source:HGNC Symbol;Acc:HGNC:30370]36752-4.197-0.2203Yes
133CDC25Ccell division cycle 25C [Source:HGNC Symbol;Acc:HGNC:1727]36777-4.228-0.2115Yes
134SPC25SPC25 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24031]36783-4.238-0.2021Yes
135RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36786-4.241-0.1926Yes
136FAM83Dfamily with sequence similarity 83 member D [Source:HGNC Symbol;Acc:HGNC:16122]36793-4.254-0.1833Yes
137MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36795-4.256-0.1737Yes
138KIF4Akinesin family member 4A [Source:HGNC Symbol;Acc:HGNC:13339]36803-4.278-0.1643Yes
139CLSPNclaspin [Source:HGNC Symbol;Acc:HGNC:19715]36808-4.294-0.1548Yes
140KNSTRNkinetochore localized astrin (SPAG5) binding protein [Source:HGNC Symbol;Acc:HGNC:30767]36820-4.303-0.1454Yes
141FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36833-4.338-0.1360Yes
142CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36838-4.351-0.1264Yes
143NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36851-4.372-0.1169Yes
144DEPDC1BDEP domain containing 1B [Source:HGNC Symbol;Acc:HGNC:24902]36871-4.420-0.1075Yes
145ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36876-4.426-0.0976Yes
146NUF2NUF2 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:14621]36883-4.431-0.0879Yes
147NRMnurim [Source:HGNC Symbol;Acc:HGNC:8003]36884-4.436-0.0779Yes
148GTSE1G2 and S-phase expressed 1 [Source:HGNC Symbol;Acc:HGNC:13698]36910-4.478-0.0685Yes
149CDCA3cell division cycle associated 3 [Source:HGNC Symbol;Acc:HGNC:14624]36915-4.481-0.0586Yes
150ESPL1extra spindle pole bodies like 1, separase [Source:HGNC Symbol;Acc:HGNC:16856]36917-4.488-0.0485Yes
151TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]36941-4.548-0.0389Yes
152CDCA2cell division cycle associated 2 [Source:HGNC Symbol;Acc:HGNC:14623]37000-4.695-0.0300Yes
153TK1thymidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11830]37007-4.708-0.0196Yes
154ESCO2establishment of sister chromatid cohesion N-acetyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:27230]37028-4.768-0.0094Yes
155MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]37062-4.9280.0008Yes
Table: GSEA details [plain text format]



Fig 2: FAN_EMBRYONIC_CTX_MICROGLIA_1   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: FAN_EMBRYONIC_CTX_MICROGLIA_1: Random ES distribution   
Gene set null distribution of ES for FAN_EMBRYONIC_CTX_MICROGLIA_1