Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetHALLMARK_PEROXISOME
Enrichment Score (ES)-0.6020022
Normalized Enrichment Score (NES)-1.2646595
Nominal p-value0.05479452
FDR q-value0.18185508
FWER p-Value0.89
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_PEROXISOME   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ERCC1ERCC excision repair 1, endonuclease non-catalytic subunit [Source:HGNC Symbol;Acc:HGNC:3433]3303.6930.0157No
2SOD2superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180]4273.3590.0356No
3ATXN1ataxin 1 [Source:HGNC Symbol;Acc:HGNC:10548]5233.1680.0541No
4PRDX5peroxiredoxin 5 [Source:HGNC Symbol;Acc:HGNC:9355]8892.5120.0610No
5PEX11Aperoxisomal biogenesis factor 11 alpha [Source:HGNC Symbol;Acc:HGNC:8852]9852.3470.0741No
6ACSL4acyl-CoA synthetase long chain family member 4 [Source:HGNC Symbol;Acc:HGNC:3571]10552.2270.0871No
7PRDX1peroxiredoxin 1 [Source:HGNC Symbol;Acc:HGNC:9352]14701.8420.0882No
8MVPmajor vault protein [Source:HGNC Symbol;Acc:HGNC:7531]16261.6950.0954No
9HSD17B11hydroxysteroid 17-beta dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:22960]18931.4700.0980No
10TSPOtranslocator protein [Source:HGNC Symbol;Acc:HGNC:1158]19201.4550.1070No
11SLC25A19solute carrier family 25 member 19 [Source:HGNC Symbol;Acc:HGNC:14409]19281.4490.1165No
12CNBPCCHC-type zinc finger nucleic acid binding protein [Source:HGNC Symbol;Acc:HGNC:13164]27321.0120.1015No
13ACOX1acyl-CoA oxidase 1 [Source:HGNC Symbol;Acc:HGNC:119]27361.0100.1082No
14BCL10BCL10 immune signaling adaptor [Source:HGNC Symbol;Acc:HGNC:989]30530.8540.1054No
15VPS4Bvacuolar protein sorting 4 homolog B [Source:HGNC Symbol;Acc:HGNC:10895]32580.7750.1050No
16YWHAHtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta [Source:HGNC Symbol;Acc:HGNC:12853]33140.7570.1086No
17CDK7cyclin dependent kinase 7 [Source:HGNC Symbol;Acc:HGNC:1778]34860.6880.1086No
18SLC27A2solute carrier family 27 member 2 [Source:HGNC Symbol;Acc:HGNC:10996]44120.4680.0867No
19DHRS3dehydrogenase/reductase 3 [Source:HGNC Symbol;Acc:HGNC:17693]46000.4070.0843No
20ISOC1isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]46510.3910.0856No
21PABPC1poly(A) binding protein cytoplasmic 1 [Source:HGNC Symbol;Acc:HGNC:8554]55330.1260.0626No
22IDI1isopentenyl-diphosphate delta isomerase 1 [Source:HGNC Symbol;Acc:HGNC:5387]57540.0640.0571No
23EPHX2epoxide hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:3402]76220.0000.0066No
24EHHADHenoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3247]76390.0000.0062No
25GSTK1glutathione S-transferase kappa 1 [Source:HGNC Symbol;Acc:HGNC:16906]93660.000-0.0405No
26ESR2estrogen receptor 2 [Source:HGNC Symbol;Acc:HGNC:3468]117500.000-0.1049No
27STSsteroid sulfatase [Source:HGNC Symbol;Acc:HGNC:11425]122530.000-0.1185No
28TTRtransthyretin [Source:HGNC Symbol;Acc:HGNC:12405]125210.000-0.1257No
29HSD11B2hydroxysteroid 11-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5209]142740.000-0.1731No
30CELcarboxyl ester lipase [Source:HGNC Symbol;Acc:HGNC:1848]156680.000-0.2107No
31DIO1iodothyronine deiodinase 1 [Source:HGNC Symbol;Acc:HGNC:2883]157310.000-0.2124No
32SERPINA6serpin family A member 6 [Source:HGNC Symbol;Acc:HGNC:1540]177740.000-0.2676No
33SEMA3Csemaphorin 3C [Source:HGNC Symbol;Acc:HGNC:10725]178470.000-0.2696No
34UGT2B17UDP glucuronosyltransferase family 2 member B17 [Source:HGNC Symbol;Acc:HGNC:12547]181820.000-0.2786No
35NR1I2nuclear receptor subfamily 1 group I member 2 [Source:HGNC Symbol;Acc:HGNC:7968]200030.000-0.3278No
36SULT2B1sulfotransferase family 2B member 1 [Source:HGNC Symbol;Acc:HGNC:11459]206550.000-0.3454No
37CRABP2cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2339]209440.000-0.3532No
38CRABP1cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]209450.000-0.3532No
39SCGB1A1secretoglobin family 1A member 1 [Source:HGNC Symbol;Acc:HGNC:12523]211420.000-0.3585No
40HAO2hydroxyacid oxidase 2 [Source:HGNC Symbol;Acc:HGNC:4810]218500.000-0.3776No
41ALDH1A1aldehyde dehydrogenase 1 family member A1 [Source:HGNC Symbol;Acc:HGNC:402]227370.000-0.4016No
42FABP6fatty acid binding protein 6 [Source:HGNC Symbol;Acc:HGNC:3561]239950.000-0.4355No
43ALBalbumin [Source:HGNC Symbol;Acc:HGNC:399]244160.000-0.4469No
44ABCC8ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]280880.000-0.5461No
45PEX5peroxisomal biogenesis factor 5 [Source:HGNC Symbol;Acc:HGNC:9719]28145-0.009-0.5476No
46PEX14peroxisomal biogenesis factor 14 [Source:HGNC Symbol;Acc:HGNC:8856]28167-0.014-0.5481No
47PEX13peroxisomal biogenesis factor 13 [Source:HGNC Symbol;Acc:HGNC:8855]28308-0.057-0.5515No
48MLYCDmalonyl-CoA decarboxylase [Source:HGNC Symbol;Acc:HGNC:7150]28388-0.081-0.5531No
49SIAH1siah E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:10857]28493-0.102-0.5552No
50ITGB1BP1integrin subunit beta 1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23927]28972-0.229-0.5666No
51SOD1superoxide dismutase 1 [Source:HGNC Symbol;Acc:HGNC:11179]29239-0.295-0.5718No
52ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit [Source:HGNC Symbol;Acc:HGNC:3435]29592-0.385-0.5788No
53PEX2peroxisomal biogenesis factor 2 [Source:HGNC Symbol;Acc:HGNC:9717]29796-0.441-0.5813No
54CTBP1C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]30311-0.558-0.5915No
55SLC23A2solute carrier family 23 member 2 [Source:HGNC Symbol;Acc:HGNC:10973]30315-0.560-0.5878No
56SMARCC1SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]30834-0.721-0.5970Yes
57FIS1fission, mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:21689]30990-0.765-0.5961Yes
58ACOT8acyl-CoA thioesterase 8 [Source:HGNC Symbol;Acc:HGNC:15919]31179-0.818-0.5957Yes
59RDH11retinol dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:17964]31314-0.865-0.5936Yes
60PEX6peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]31627-0.966-0.5956Yes
61CLN8CLN8 transmembrane ER and ERGIC protein [Source:HGNC Symbol;Acc:HGNC:2079]31636-0.969-0.5893Yes
62HRASHRas proto-oncogene, GTPase [Source:HGNC Symbol;Acc:HGNC:5173]31742-1.005-0.5854Yes
63ACSL1acyl-CoA synthetase long chain family member 1 [Source:HGNC Symbol;Acc:HGNC:3569]31786-1.020-0.5798Yes
64SLC25A17solute carrier family 25 member 17 [Source:HGNC Symbol;Acc:HGNC:10987]31998-1.092-0.5782Yes
65LONP2lon peptidase 2, peroxisomal [Source:HGNC Symbol;Acc:HGNC:20598]32216-1.184-0.5762Yes
66ACSL5acyl-CoA synthetase long chain family member 5 [Source:HGNC Symbol;Acc:HGNC:16526]32288-1.215-0.5700Yes
67SLC25A4solute carrier family 25 member 4 [Source:HGNC Symbol;Acc:HGNC:10990]33424-1.630-0.5898Yes
68HMGCL3-hydroxy-3-methylglutaryl-CoA lyase [Source:HGNC Symbol;Acc:HGNC:5005]33730-1.766-0.5862Yes
69ABCB9ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]33736-1.771-0.5745Yes
70NUDT19nudix hydrolase 19 [Source:HGNC Symbol;Acc:HGNC:32036]33829-1.826-0.5648Yes
71RXRGretinoid X receptor gamma [Source:HGNC Symbol;Acc:HGNC:10479]33936-1.880-0.5551Yes
72ABCD3ATP binding cassette subfamily D member 3 [Source:HGNC Symbol;Acc:HGNC:67]34018-1.925-0.5445Yes
73IDEinsulin degrading enzyme [Source:HGNC Symbol;Acc:HGNC:5381]34028-1.929-0.5318Yes
74FDPSfarnesyl diphosphate synthase [Source:HGNC Symbol;Acc:HGNC:3631]34167-2.006-0.5222Yes
75ABCB1ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]34305-2.081-0.5120Yes
76PEX11Bperoxisomal biogenesis factor 11 beta [Source:HGNC Symbol;Acc:HGNC:8853]34462-2.130-0.5020Yes
77CRATcarnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]34690-2.286-0.4929Yes
78SCP2sterol carrier protein 2 [Source:HGNC Symbol;Acc:HGNC:10606]34707-2.292-0.4780Yes
79ACAA1acetyl-CoA acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:82]34902-2.428-0.4670Yes
80CACNA1Bcalcium voltage-gated channel subunit alpha1 B [Source:HGNC Symbol;Acc:HGNC:1389]34931-2.432-0.4516Yes
81CADM1cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5951]34967-2.459-0.4361Yes
82HSD17B4hydroxysteroid 17-beta dehydrogenase 4 [Source:HGNC Symbol;Acc:HGNC:5213]34969-2.461-0.4197Yes
83ECI2enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]34973-2.463-0.4033Yes
84RETSATretinol saturase [Source:HGNC Symbol;Acc:HGNC:25991]35106-2.563-0.3898Yes
85CATcatalase [Source:HGNC Symbol;Acc:HGNC:1516]35119-2.573-0.3729Yes
86DLG4discs large MAGUK scaffold protein 4 [Source:HGNC Symbol;Acc:HGNC:2903]35162-2.609-0.3566Yes
87IDH2isocitrate dehydrogenase (NADP(+)) 2 [Source:HGNC Symbol;Acc:HGNC:5383]35196-2.643-0.3399Yes
88ABCC5ATP binding cassette subfamily C member 5 [Source:HGNC Symbol;Acc:HGNC:56]35217-2.663-0.3226Yes
89HSD3B7hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 [Source:HGNC Symbol;Acc:HGNC:18324]35236-2.675-0.3053Yes
90GNPATglyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]35335-2.708-0.2898Yes
91CTPS1CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]35422-2.773-0.2737Yes
92SLC35B2solute carrier family 35 member B2 [Source:HGNC Symbol;Acc:HGNC:16872]35624-2.974-0.2592Yes
93ALDH9A1aldehyde dehydrogenase 9 family member A1 [Source:HGNC Symbol;Acc:HGNC:412]35743-3.081-0.2419Yes
94ABCB4ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]35781-3.121-0.2220Yes
95ELOVL5ELOVL fatty acid elongase 5 [Source:HGNC Symbol;Acc:HGNC:21308]35877-3.225-0.2031Yes
96TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36054-3.383-0.1852Yes
97FADS1fatty acid desaturase 1 [Source:HGNC Symbol;Acc:HGNC:3574]36100-3.438-0.1635Yes
98ECH1enoyl-CoA hydratase 1 [Source:HGNC Symbol;Acc:HGNC:3149]36319-3.655-0.1450Yes
99ABCD1ATP binding cassette subfamily D member 1 [Source:HGNC Symbol;Acc:HGNC:61]36470-3.832-0.1235Yes
100IDH1isocitrate dehydrogenase (NADP(+)) 1 [Source:HGNC Symbol;Acc:HGNC:5382]36479-3.842-0.0980Yes
101CLN6CLN6 transmembrane ER protein [Source:HGNC Symbol;Acc:HGNC:2077]36637-4.046-0.0753Yes
102MSH2mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]36821-4.303-0.0515Yes
103DHCR2424-dehydrocholesterol reductase [Source:HGNC Symbol;Acc:HGNC:2859]36824-4.316-0.0227Yes
104ABCD2ATP binding cassette subfamily D member 2 [Source:HGNC Symbol;Acc:HGNC:66]36913-4.4790.0048Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_PEROXISOME   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_PEROXISOME: Random ES distribution   
Gene set null distribution of ES for HALLMARK_PEROXISOME