Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetCHR18Q12
Enrichment Score (ES)-0.6984742
Normalized Enrichment Score (NES)-1.4743025
Nominal p-value0.0037593986
FDR q-value0.20635915
FWER p-Value0.577
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR18Q12   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ZNF271Pzinc finger protein 271, pseudogene [Source:HGNC Symbol;Acc:HGNC:13065]29230.969-0.0426No
2SLC39A6solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]45900.443-0.0710No
3ZNF24zinc finger protein 24 [Source:HGNC Symbol;Acc:HGNC:13032]48070.392-0.0621No
4CELF4CUGBP Elav-like family member 4 [Source:HGNC Symbol;Acc:HGNC:14015]52700.273-0.0643No
5B4GALT6beta-1,4-galactosyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:929]53940.239-0.0587No
6KRT8P5keratin 8 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:31094]54250.237-0.0506No
7LINC01477long intergenic non-protein coding RNA 1477 [Source:HGNC Symbol;Acc:HGNC:51119]67830.000-0.0873No
8LINC01478long intergenic non-protein coding RNA 1478 [Source:HGNC Symbol;Acc:HGNC:51121]67840.000-0.0873No
9RNU6-167PRNA, U6 small nuclear 167, pseudogene [Source:HGNC Symbol;Acc:HGNC:47130]68850.000-0.0900No
10RNU6-1050PRNA, U6 small nuclear 1050, pseudogene [Source:HGNC Symbol;Acc:HGNC:48013]70350.000-0.0940No
11KLHL14kelch like family member 14 [Source:HGNC Symbol;Acc:HGNC:29266]76100.000-0.1095No
12RPL12P40ribosomal protein L12 pseudogene 40 [Source:HGNC Symbol;Acc:HGNC:36439]78270.000-0.1153No
13CDH2cadherin 2 [Source:HGNC Symbol;Acc:HGNC:1759]94980.000-0.1605No
14RNF125ring finger protein 125 [Source:HGNC Symbol;Acc:HGNC:21150]106460.000-0.1915No
15AC090386.1novel transcript, antisense to CELF4115820.000-0.2167No
16MIR5583-1microRNA 5583-1 [Source:HGNC Symbol;Acc:HGNC:43491]118890.000-0.2250No
17SIGLEC15sialic acid binding Ig like lectin 15 [Source:HGNC Symbol;Acc:HGNC:27596]119780.000-0.2274No
18TTRtransthyretin [Source:HGNC Symbol;Acc:HGNC:12405]127500.000-0.2482No
19SETBP1SET binding protein 1 [Source:HGNC Symbol;Acc:HGNC:15573]139950.000-0.2818No
20AC016493.1novel transcript, antisense to KIAA1328153560.000-0.3186No
21MLECP1malectin pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:51122]156720.000-0.3271No
22ASXL3ASXL transcriptional regulator 3 [Source:HGNC Symbol;Acc:HGNC:29357]158850.000-0.3328No
23DSG2-AS1DSG2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51311]158900.000-0.3329No
24RNU6-408PRNA, U6 small nuclear 408, pseudogene [Source:HGNC Symbol;Acc:HGNC:47371]163020.000-0.3440No
25SLC14A2solute carrier family 14 member 2 [Source:HGNC Symbol;Acc:HGNC:10919]168100.000-0.3577No
26DSG1-AS1DSG1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51115]168820.000-0.3596No
27SYT4synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]170210.000-0.3634No
28RNA5SP455RNA, 5S ribosomal pseudogene 455 [Source:HGNC Symbol;Acc:HGNC:43355]173820.000-0.3731No
29RNA5SP454RNA, 5S ribosomal pseudogene 454 [Source:HGNC Symbol;Acc:HGNC:43354]173840.000-0.3731No
30RNA5SP453RNA, 5S ribosomal pseudogene 453 [Source:HGNC Symbol;Acc:HGNC:43353]173860.000-0.3731No
31LRRC37A7Pleucine rich repeat containing 37 member A7, pseudogene [Source:HGNC Symbol;Acc:HGNC:43792]177440.000-0.3828No
32KC6keratoconus gene 6 [Source:NCBI gene (formerly Entrezgene);Acc:641516]182900.000-0.3975No
33GAREM1GRB2 associated regulator of MAPK1 subtype 1 [Source:HGNC Symbol;Acc:HGNC:26136]183140.000-0.3981No
34RN7SKP182RN7SK pseudogene 182 [Source:HGNC Symbol;Acc:HGNC:45906]183990.000-0.4004No
35RN7SKP44RN7SK pseudogene 44 [Source:HGNC Symbol;Acc:HGNC:45768]186020.000-0.4059No
36DSC1desmocollin 1 [Source:HGNC Symbol;Acc:HGNC:3035]189660.000-0.4157No
37DSC2desmocollin 2 [Source:HGNC Symbol;Acc:HGNC:3036]189680.000-0.4157No
38DSC3desmocollin 3 [Source:HGNC Symbol;Acc:HGNC:3037]189710.000-0.4158No
39DSG1desmoglein 1 [Source:HGNC Symbol;Acc:HGNC:3048]189990.000-0.4165No
40DSG2desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]190000.000-0.4165No
41DSG3desmoglein 3 [Source:HGNC Symbol;Acc:HGNC:3050]190020.000-0.4165No
42DSG4desmoglein 4 [Source:HGNC Symbol;Acc:HGNC:21307]190040.000-0.4165No
43DTNAdystrobrevin alpha [Source:HGNC Symbol;Acc:HGNC:3057]194000.000-0.4272No
44LINC00907long intergenic non-protein coding RNA 907 [Source:HGNC Symbol;Acc:HGNC:44327]201620.000-0.4478No
45MEP1Bmeprin A subunit beta [Source:HGNC Symbol;Acc:HGNC:7020]203230.000-0.4521No
46NOL4nucleolar protein 4 [Source:HGNC Symbol;Acc:HGNC:7870]203990.000-0.4541No
47RPL17P45ribosomal protein L17 pseudogene 45 [Source:HGNC Symbol;Acc:HGNC:35618]219540.000-0.4961No
48NRBF2P1nuclear receptor binding factor 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:44604]222260.000-0.5034No
49MIR4319microRNA 4319 [Source:HGNC Symbol;Acc:HGNC:38212]224710.000-0.5100No
50MIR4318microRNA 4318 [Source:HGNC Symbol;Acc:HGNC:38333]224720.000-0.5100No
51RNU6-1242PRNA, U6 small nuclear 1242, pseudogene [Source:HGNC Symbol;Acc:HGNC:48205]231640.000-0.5287No
52CCDC178coiled-coil domain containing 178 [Source:HGNC Symbol;Acc:HGNC:29588]233270.000-0.5331No
53SLC14A2-AS1SLC14A2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51125]234280.000-0.5358No
54RNU6-857PRNA, U6 small nuclear 857, pseudogene [Source:HGNC Symbol;Acc:HGNC:47820]236560.000-0.5419No
55LINC01902long intergenic non-protein coding RNA 1902 [Source:HGNC Symbol;Acc:HGNC:52721]254930.000-0.5915No
56LINC01901long intergenic non-protein coding RNA 1901 [Source:HGNC Symbol;Acc:HGNC:52720]254990.000-0.5917No
57MIR3929microRNA 3929 [Source:HGNC Symbol;Acc:HGNC:38945]255860.000-0.5940No
58RIT2Ras like without CAAX 2 [Source:HGNC Symbol;Acc:HGNC:10017]257360.000-0.5980No
59RNU6-706PRNA, U6 small nuclear 706, pseudogene [Source:HGNC Symbol;Acc:HGNC:47669]259900.000-0.6048No
60MIR187microRNA 187 [Source:HGNC Symbol;Acc:HGNC:31558]261560.000-0.6093No
61DSCASDSC1/DSC2 antisense RNA [Source:HGNC Symbol;Acc:HGNC:51116]283110.000-0.6675No
62INO80CINO80 complex subunit C [Source:HGNC Symbol;Acc:HGNC:26994]28391-0.009-0.6693No
63CLUHP6clustered mitochondria homolog pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:51571]28537-0.048-0.6714No
64RPL7AP66ribosomal protein L7a pseudogene 66 [Source:HGNC Symbol;Acc:HGNC:35682]29166-0.215-0.6803No
65FHOD3formin homology 2 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26178]29282-0.239-0.6745No
66TRAPPC8trafficking protein particle complex 8 [Source:HGNC Symbol;Acc:HGNC:29169]30172-0.366-0.6847Yes
67RNF138ring finger protein 138 [Source:HGNC Symbol;Acc:HGNC:17765]30494-0.445-0.6767Yes
68RPRD1Aregulation of nuclear pre-mRNA domain containing 1A [Source:HGNC Symbol;Acc:HGNC:25560]30794-0.525-0.6650Yes
69ZSCAN30zinc finger and SCAN domain containing 30 [Source:HGNC Symbol;Acc:HGNC:33517]31097-0.613-0.6502Yes
70C18orf21chromosome 18 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:28802]31793-0.815-0.6383Yes
71ZNF397zinc finger protein 397 [Source:HGNC Symbol;Acc:HGNC:18818]31926-0.856-0.6097Yes
72PIK3C3phosphatidylinositol 3-kinase catalytic subunit type 3 [Source:HGNC Symbol;Acc:HGNC:8974]32726-1.104-0.5899Yes
73ELP2elongator acetyltransferase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:18248]32865-1.153-0.5503Yes
74ZNF396zinc finger protein 396 [Source:HGNC Symbol;Acc:HGNC:18824]33102-1.244-0.5099Yes
75SLC25A52solute carrier family 25 member 52 [Source:HGNC Symbol;Acc:HGNC:23324]33252-1.304-0.4650Yes
76WBP11P1WBP11 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:26250]33257-1.304-0.4161Yes
77GALNT1polypeptide N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:4123]33551-1.413-0.3709Yes
78MOCOSmolybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]34077-1.655-0.3229Yes
79KIAA1328KIAA1328 [Source:HGNC Symbol;Acc:HGNC:29248]34181-1.710-0.2614Yes
80MAPRE2microtubule associated protein RP/EB family member 2 [Source:HGNC Symbol;Acc:HGNC:6891]34248-1.740-0.1979Yes
81TPGS2tubulin polyglutamylase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24561]34371-1.808-0.1332Yes
82HNRNPA1P7heterogeneous nuclear ribonucleoprotein A1 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:31015]35585-2.520-0.0713Yes
83SLC14A1solute carrier family 14 member 1 (Kidd blood group) [Source:HGNC Symbol;Acc:HGNC:10918]36091-2.9800.0270Yes
Table: GSEA details [plain text format]



Fig 2: CHR18Q12   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR18Q12: Random ES distribution   
Gene set null distribution of ES for CHR18Q12