Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetCHR2Q11
Enrichment Score (ES)0.48554012
Normalized Enrichment Score (NES)1.2216154
Nominal p-value0.055944055
FDR q-value0.5649231
FWER p-Value0.988
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR2Q11   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1DUSP2dual specificity phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:3068]1114.3990.0710Yes
2SEMA4Csemaphorin 4C [Source:HGNC Symbol;Acc:HGNC:10731]1524.1810.1403Yes
3ARID5AAT-rich interaction domain 5A [Source:HGNC Symbol;Acc:HGNC:17361]3543.3110.1905Yes
4HMGN2P22high mobility group nucleosomal binding domain 2 pseudogene 22 [Source:HGNC Symbol;Acc:HGNC:39387]4153.1800.2424Yes
5MITD1microtubule interacting and trafficking domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25207]8402.3920.2712Yes
6ITPRIPL1ITPRIP like 1 [Source:HGNC Symbol;Acc:HGNC:29371]8742.3250.3094Yes
7CNNM4cyclin and CBS domain divalent metal cation transport mediator 4 [Source:HGNC Symbol;Acc:HGNC:105]12331.9140.3319Yes
8RNF149ring finger protein 149 [Source:HGNC Symbol;Acc:HGNC:23137]16441.5770.3474Yes
9TMEM127transmembrane protein 127 [Source:HGNC Symbol;Acc:HGNC:26038]18891.4320.3649Yes
10MRPL30mitochondrial ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:14036]19551.3880.3864Yes
11TSGA10testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]23771.2260.3957Yes
12TXNDC9thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]25591.1330.4098Yes
13KANSL3KAT8 regulatory NSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25473]30960.9050.4106Yes
14MGAT4Aalpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [Source:HGNC Symbol;Acc:HGNC:7047]31520.8850.4240Yes
15ATP5F1BP1ATP synthase F1 subunit beta pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:831]34190.7960.4302Yes
16NEURL3neuralized E3 ubiquitin protein ligase 3 [Source:HGNC Symbol;Acc:HGNC:25162]36740.6960.4350Yes
17ZNF2zinc finger protein 2 [Source:HGNC Symbol;Acc:HGNC:12991]37780.6870.4438Yes
18RPS24P6ribosomal protein S24 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:36240]39260.6330.4505Yes
19ACTR1Bactin related protein 1B [Source:HGNC Symbol;Acc:HGNC:168]40510.5910.4570Yes
20BBIP1P1BBSome interacting protein 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:52781]40620.5880.4667Yes
21EIF5Beukaryotic translation initiation factor 5B [Source:HGNC Symbol;Acc:HGNC:30793]41140.5730.4749Yes
22CIAO1cytosolic iron-sulfur assembly component 1 [Source:HGNC Symbol;Acc:HGNC:14280]46120.4380.4689Yes
23TMEM131transmembrane protein 131 [Source:HGNC Symbol;Acc:HGNC:30366]47940.3970.4706Yes
24FAHD2CPfumarylacetoacetate hydrolase domain containing 2C, pseudogene [Source:HGNC Symbol;Acc:HGNC:44135]47960.3950.4773Yes
25CHST10carbohydrate sulfotransferase 10 [Source:HGNC Symbol;Acc:HGNC:19650]48930.3680.4809Yes
26ANKRD23ankyrin repeat domain 23 [Source:HGNC Symbol;Acc:HGNC:24470]50900.3120.4808Yes
27CNOT11CCR4-NOT transcription complex subunit 11 [Source:HGNC Symbol;Acc:HGNC:25217]51070.3070.4855Yes
28LMAN2Llectin, mannose binding 2 like [Source:HGNC Symbol;Acc:HGNC:19263]53470.2510.4833No
29COX5Bcytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]58080.1380.4732No
30COA5cytochrome c oxidase assembly factor 5 [Source:HGNC Symbol;Acc:HGNC:33848]60480.0860.4682No
31ANKRD39ankyrin repeat domain 39 [Source:HGNC Symbol;Acc:HGNC:28640]61050.0660.4677No
32MAP4K4mitogen-activated protein kinase kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6866]62470.0320.4645No
33CRACDLCRACD like [Source:HGNC Symbol;Acc:HGNC:33454]66630.0000.4532No
34LONRF2LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]72220.0000.4381No
35AC013270.1novel transcript73030.0000.4360No
36ANKRD36ankyrin repeat domain 36 [Source:HGNC Symbol;Acc:HGNC:24079]77530.0000.4238No
37ASTLastacin like metalloendopeptidase [Source:HGNC Symbol;Acc:HGNC:31704]79100.0000.4196No
38PROM2prominin 2 [Source:HGNC Symbol;Acc:HGNC:20685]83670.0000.4073No
39OR7E102Polfactory receptor family 7 subfamily E member 102 pseudogene [Source:HGNC Symbol;Acc:HGNC:15043]84430.0000.4052No
40TBC1D8-AS1TBC1D8 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:52782]88650.0000.3939No
41LINC01104long intergenic non-protein coding RNA 1104 [Source:HGNC Symbol;Acc:HGNC:49226]90080.0000.3900No
42IGKV3OR2-5immunoglobulin kappa variable 3/OR2-5 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5832]92120.0000.3845No
43TRIM43CPtripartite motif containing 43C, pseudogene [Source:HGNC Symbol;Acc:HGNC:43981]96010.0000.3740No
44NPAS2neuronal PAS domain protein 2 [Source:HGNC Symbol;Acc:HGNC:7895]98440.0000.3675No
45IGKV1OR2-6immunoglobulin kappa variable 1/OR2-6 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5770]99730.0000.3640No
46IGKV1OR2-9immunoglobulin kappa variable 1/OR2-9 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5771]99770.0000.3639No
47IGKV1OR2-3immunoglobulin kappa variable 1/OR2-3 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5769]99840.0000.3638No
48FAM178Bfamily with sequence similarity 178 member B [Source:HGNC Symbol;Acc:HGNC:28036]105960.0000.3472No
49FABP7P2fatty acid binding protein 7 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:41952]109800.0000.3369No
50ANKRD20A8Pankyrin repeat domain 20 family member A8, pseudogene [Source:HGNC Symbol;Acc:HGNC:23666]110770.0000.3343No
51RNU4-84PRNA, U4 small nuclear 84, pseudogene [Source:HGNC Symbol;Acc:HGNC:47020]112590.0000.3294No
52RNU6-1320PRNA, U6 small nuclear 1320, pseudogene [Source:HGNC Symbol;Acc:HGNC:48283]115960.0000.3203No
53SLC2AXP1solute carrier family 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:31077]116920.0000.3177No
54AFF3AF4/FMR2 family member 3 [Source:HGNC Symbol;Acc:HGNC:6473]117170.0000.3171No
55LINC00342long intergenic non-protein coding RNA 342 [Source:HGNC Symbol;Acc:HGNC:42470]130710.0000.2805No
56MTCO1P48MT-CO1 pseudogene 48 [Source:HGNC Symbol;Acc:HGNC:52113]131810.0000.2775No
57MTCO3P45MT-CO3 pseudogene 45 [Source:HGNC Symbol;Acc:HGNC:52148]141790.0000.2505No
58RFX8RFX family member 8, lacking RFX DNA binding domain [Source:HGNC Symbol;Acc:HGNC:37253]144780.0000.2425No
59RNU7-46PRNA, U7 small nuclear 46 pseudogene [Source:HGNC Symbol;Acc:HGNC:34142]149650.0000.2293No
60TRIM43tripartite motif containing 43 [Source:HGNC Symbol;Acc:HGNC:19015]154430.0000.2164No
61RN7SL575PRNA, 7SL, cytoplasmic 575, pseudogene [Source:HGNC Symbol;Acc:HGNC:46591]157580.0000.2079No
62IL1R1interleukin 1 receptor type 1 [Source:HGNC Symbol;Acc:HGNC:5993]158950.0000.2042No
63IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]158960.0000.2042No
64ZAP70zeta chain of T cell receptor associated protein kinase 70 [Source:HGNC Symbol;Acc:HGNC:12858]160300.0000.2006No
65RN7SL313PRNA, 7SL, cytoplasmic 313, pseudogene [Source:HGNC Symbol;Acc:HGNC:46329]163300.0000.1926No
66ADRA2Badrenoceptor alpha 2B [Source:HGNC Symbol;Acc:HGNC:282]165320.0000.1871No
67AC097374.1pseudogene similar to part of asparagine synthetase (ASNS)172160.0000.1686No
68AL845331.1putative aquaporin-7-like protein 3 [Source:NCBI gene (formerly Entrezgene);Acc:100509620]177300.0000.1548No
69ANKRD36Cankyrin repeat domain 36C [Source:HGNC Symbol;Acc:HGNC:32946]178750.0000.1509No
70ANKRD36Bankyrin repeat domain 36B [Source:HGNC Symbol;Acc:HGNC:29333]178810.0000.1507No
71STARD7-AS1STARD7 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40827]182930.0000.1396No
72IGKV1OR2-11immunoglobulin kappa variable 1/OR2-11 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5768]184590.0000.1351No
73IGKV2OR2-7Dimmunoglobulin kappa variable 2/OR2-7D (pseudogene) [Source:HGNC Symbol;Acc:HGNC:37489]185890.0000.1317No
74IGKV2OR2-10immunoglobulin kappa variable 2/OR2-10 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5806]186370.0000.1304No
75MALmal, T cell differentiation protein [Source:HGNC Symbol;Acc:HGNC:6817]189640.0000.1216No
76RNA5SP101RNA, 5S ribosomal pseudogene 101 [Source:HGNC Symbol;Acc:HGNC:42899]190870.0000.1183No
77NMSneuromedin S [Source:HGNC Symbol;Acc:HGNC:32203]194090.0000.1096No
78NANOGNBP1NANOGNB pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:42158]194770.0000.1078No
79LINC01870long intergenic non-protein coding RNA 1870 [Source:HGNC Symbol;Acc:HGNC:52689]195890.0000.1048No
80LINC01868long intergenic non-protein coding RNA 1868 [Source:HGNC Symbol;Acc:HGNC:52688]195960.0000.1046No
81LINC01849long intergenic non-protein coding RNA 1849 [Source:HGNC Symbol;Acc:HGNC:52665]196960.0000.1019No
82TEKT4tektin 4 [Source:HGNC Symbol;Acc:HGNC:31012]198890.0000.0967No
83GPAT2P2glycerol-3-phosphate acyltransferase 2 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:52331]200880.0000.0914No
84GPAT2P1glycerol-3-phosphate acyltransferase 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:52330]200930.0000.0913No
85CNGA3cyclic nucleotide gated channel subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:2150]209730.0000.0675No
86KCNIP3potassium voltage-gated channel interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:15523]210000.0000.0668No
87UBTFL3UBTF like 3 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:35402]210980.0000.0642No
88UBTFL6UBTF like 6 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:35406]211010.0000.0641No
89UBTFL5UBTF like 5 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:35405]211020.0000.0641No
90RN7SL210PRNA, 7SL, cytoplasmic 210, pseudogene [Source:HGNC Symbol;Acc:HGNC:46226]211610.0000.0625No
91HMGN1P36high mobility group nucleosome binding domain 1 pseudogene 36 [Source:HGNC Symbol;Acc:HGNC:39380]221740.0000.0351No
92TRIM43Btripartite motif containing 43B [Source:HGNC Symbol;Acc:HGNC:37146]221960.0000.0346No
93FER1L5fer-1 like family member 5 [Source:HGNC Symbol;Acc:HGNC:19044]224660.0000.0273No
94LYG1lysozyme g1 [Source:HGNC Symbol;Acc:HGNC:27014]225420.0000.0253No
95LYG2lysozyme g2 [Source:HGNC Symbol;Acc:HGNC:29615]225430.0000.0253No
96GPAT2glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:27168]227060.0000.0209No
97TRIM51JPtripartite motif-containing 51J, pseudogene [Source:HGNC Symbol;Acc:HGNC:43978]233900.0000.0024No
98CNN2P11calponin 2 pseudogene 11 [Source:HGNC Symbol;Acc:HGNC:39536]242680.000-0.0213No
99IGKV2OR2-2immunoglobulin kappa variable 2/OR2-2 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5808]243360.000-0.0231No
100IGKV2OR2-1immunoglobulin kappa variable 2/OR2-1 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5805]243380.000-0.0232No
101IGKV2OR2-8immunoglobulin kappa variable 2/OR2-8 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5811]243500.000-0.0235No
102IGKV2OR2-7immunoglobulin kappa variable 2/OR2-7 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5810]243510.000-0.0235No
103RNU7-96PRNA, U7 small nuclear 96 pseudogene [Source:HGNC Symbol;Acc:HGNC:45630]255980.000-0.0572No
104MIR5696microRNA 5696 [Source:HGNC Symbol;Acc:HGNC:43516]257240.000-0.0606No
105CNN2P8calponin 2 pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:39533]257980.000-0.0625No
106MIR3127microRNA 3127 [Source:HGNC Symbol;Acc:HGNC:38269]259920.000-0.0677No
107RNU4-8PRNA, U4 small nuclear 8, pseudogene [Source:HGNC Symbol;Acc:HGNC:10195]262140.000-0.0737No
108VWA3Bvon Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]263180.000-0.0765No
109C2orf92chromosome 2 open reading frame 92 [Source:HGNC Symbol;Acc:HGNC:49272]263740.000-0.0780No
110C2orf15chromosome 2 open reading frame 15 [Source:HGNC Symbol;Acc:HGNC:28436]265040.000-0.0815No
111TRIM64FPtripartite motif containing 64F, pseudogene [Source:HGNC Symbol;Acc:HGNC:43976]266280.000-0.0848No
112ZNF514zinc finger protein 514 [Source:HGNC Symbol;Acc:HGNC:25894]268440.000-0.0906No
113CYP4F32Pcytochrome P450 family 4 subfamily F member 32, pseudogene [Source:HGNC Symbol;Acc:HGNC:39951]278400.000-0.1176No
114CREG2cellular repressor of E1A stimulated genes 2 [Source:HGNC Symbol;Acc:HGNC:14272]280980.000-0.1245No
115RPL31ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]28880-0.143-0.1432No
116PDCL3phosducin like 3 [Source:HGNC Symbol;Acc:HGNC:28860]29550-0.310-0.1561No
117YWHAQP5YWHAQ pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:37684]29630-0.320-0.1529No
118UNC50unc-50 inner nuclear membrane RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16046]30122-0.352-0.1602No
119SNRNP200small nuclear ribonucleoprotein U5 subunit 200 [Source:HGNC Symbol;Acc:HGNC:30859]30182-0.368-0.1556No
120MRPS5mitochondrial ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:14498]31817-0.823-0.1860No
121LIPT1lipoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:29569]32706-1.099-0.1915No
122CNNM3cyclin and CBS domain divalent metal cation transport mediator 3 [Source:HGNC Symbol;Acc:HGNC:104]32810-1.135-0.1752No
123FAHD2Afumarylacetoacetate hydrolase domain containing 2A [Source:HGNC Symbol;Acc:HGNC:24252]33349-1.311-0.1677No
124STARD7StAR related lipid transfer domain containing 7 [Source:HGNC Symbol;Acc:HGNC:18063]33381-1.334-0.1461No
125REV1REV1 DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:14060]33698-1.470-0.1299No
126FAHD2Bfumarylacetoacetate hydrolase domain containing 2B [Source:HGNC Symbol;Acc:HGNC:25318]34164-1.702-0.1139No
127INPP4Ainositol polyphosphate-4-phosphatase type I A [Source:HGNC Symbol;Acc:HGNC:6074]34484-1.879-0.0909No
128SNORD89small nucleolar RNA, C/D box 89 [Source:HGNC Symbol;Acc:HGNC:32750]34639-1.945-0.0624No
129NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]34857-2.014-0.0343No
130SNX18P14sorting nexin 18 pseudogene 14 [Source:HGNC Symbol;Acc:HGNC:39622]35936-2.782-0.0167No
131TBC1D8TBC1 domain family member 8 [Source:HGNC Symbol;Acc:HGNC:17791]35985-2.8460.0299No
Table: GSEA details [plain text format]



Fig 2: CHR2Q11   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR2Q11: Random ES distribution   
Gene set null distribution of ES for CHR2Q11