Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetCHR5Q13
Enrichment Score (ES)0.4437171
Normalized Enrichment Score (NES)1.1329733
Nominal p-value0.14084508
FDR q-value0.69158316
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR5Q13   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SUMO2P5SUMO2 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:39015]1494.1900.0601Yes
2MAP1Bmicrotubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]1804.0230.1208Yes
3TMEM171transmembrane protein 171 [Source:HGNC Symbol;Acc:HGNC:27031]2313.8000.1776Yes
4HMGN2P4high mobility group nucleosomal binding domain 2 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:33567]2973.4970.2294Yes
5SUMO2P4SUMO2 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:39014]4053.1990.2754Yes
6ALDH7A1P1aldehyde dehydrogenase 7 family member A1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:878]7472.5480.3052Yes
7AGGF1angiogenic factor with G-patch and FHA domains 1 [Source:HGNC Symbol;Acc:HGNC:24684]11581.9990.3247Yes
8HMGCR3-hydroxy-3-methylglutaryl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:5006]21541.3710.3188Yes
9CFL1P5cofilin 1 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:1877]21641.3650.3394Yes
10CDK7cyclin dependent kinase 7 [Source:HGNC Symbol;Acc:HGNC:1778]25951.1150.3449Yes
11IQGAP2IQ motif containing GTPase activating protein 2 [Source:HGNC Symbol;Acc:HGNC:6111]25971.1140.3619Yes
12GTF2H2Bgeneral transcription factor IIH subunit 2B (pseudogene) [Source:HGNC Symbol;Acc:HGNC:31393]27031.0620.3753Yes
13SAP18P1SAP18 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:51567]27141.0620.3913Yes
14CCDC125coiled-coil domain containing 125 [Source:HGNC Symbol;Acc:HGNC:28924]27521.0460.4063Yes
15AK6adenylate kinase 6 [Source:HGNC Symbol;Acc:HGNC:49151]28910.9800.4175Yes
16BIN2P2bridging integrator 2 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:43661]30530.9210.4273Yes
17SNRPCP2small nuclear ribonucleoprotein polypeptide C pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:49817]31750.8790.4374Yes
18UTP15UTP15 small subunit processome component [Source:HGNC Symbol;Acc:HGNC:25758]38340.6650.4298Yes
19MRPS27mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]39330.6310.4368Yes
20NDUFB9P1NADH:ubiquinone oxidoreductase subunit B9 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:52269]40760.5840.4419Yes
21RPL7P23ribosomal protein L7 pseudogene 23 [Source:HGNC Symbol;Acc:HGNC:35658]43040.5190.4437Yes
22NAIPNLR family apoptosis inhibitory protein [Source:HGNC Symbol;Acc:HGNC:7634]48030.3930.4363No
23BTF3basic transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:1125]50960.3110.4331No
24TAF9TATA-box binding protein associated factor 9 [Source:HGNC Symbol;Acc:HGNC:11542]55130.2150.4252No
25RAD17RAD17 checkpoint clamp loader component [Source:HGNC Symbol;Acc:HGNC:9807]58660.1300.4176No
26VWA8P1von Willebrand factor A domain containing 8 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:44271]65230.0000.3999No
27LINC01385long intergenic non-protein coding RNA 1385 [Source:HGNC Symbol;Acc:HGNC:50657]69170.0000.3892No
28LINC01386long intergenic non-protein coding RNA 1386 [Source:HGNC Symbol;Acc:HGNC:50659]69180.0000.3892No
29LINC01333long intergenic non-protein coding RNA 1333 [Source:HGNC Symbol;Acc:HGNC:50539]70710.0000.3851No
30LINC01335long intergenic non-protein coding RNA 1335 [Source:HGNC Symbol;Acc:HGNC:50542]70720.0000.3851No
31LINC01331long intergenic non-protein coding RNA 1331 [Source:HGNC Symbol;Acc:HGNC:50538]71060.0000.3842No
32LINC01332long intergenic non-protein coding RNA 1332 [Source:HGNC Symbol;Acc:HGNC:50540]71070.0000.3842No
33ANKRD31ankyrin repeat domain 31 [Source:HGNC Symbol;Acc:HGNC:26853]77620.0000.3666No
34PMCHL2pro-melanin concentrating hormone like 2 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:9111]89890.0000.3334No
35CRHBPcorticotropin releasing hormone binding protein [Source:HGNC Symbol;Acc:HGNC:2356]96860.0000.3146No
36GTF2H2CGTF2H2 family member C [Source:HGNC Symbol;Acc:HGNC:31394]97260.0000.3135No
37S100ZS100 calcium binding protein Z [Source:HGNC Symbol;Acc:HGNC:30367]117590.0000.2585No
38ZBED3-AS1ZBED3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44188]118800.0000.2553No
39RNU6-1330PRNA, U6 small nuclear 1330, pseudogene [Source:HGNC Symbol;Acc:HGNC:48293]119840.0000.2525No
40RNU7-196PRNA, U7 small nuclear 196 pseudogene [Source:HGNC Symbol;Acc:HGNC:45730]122070.0000.2465No
41SLC25A5P9solute carrier family 25 member 5 pseudogene 9 [Source:HGNC Symbol;Acc:HGNC:35468]125530.0000.2372No
42CARTPTCART prepropeptide [Source:HGNC Symbol;Acc:HGNC:24323]125730.0000.2367No
43TMEM174transmembrane protein 174 [Source:HGNC Symbol;Acc:HGNC:28187]132680.0000.2179No
44RN7SL814PRNA, 7SL, cytoplasmic 814, pseudogene [Source:HGNC Symbol;Acc:HGNC:46830]133630.0000.2154No
45LINC02242long intergenic non-protein coding RNA 2242 [Source:HGNC Symbol;Acc:HGNC:53127]138380.0000.2025No
46LINC02230long intergenic non-protein coding RNA 2230 [Source:HGNC Symbol;Acc:HGNC:53099]138590.0000.2020No
47LINC02219long intergenic non-protein coding RNA 2219 [Source:HGNC Symbol;Acc:HGNC:53086]141330.0000.1946No
48LINC02122long intergenic non-protein coding RNA 2122 [Source:HGNC Symbol;Acc:HGNC:52979]143030.0000.1900No
49LINC02198long intergenic non-protein coding RNA 2198 [Source:HGNC Symbol;Acc:HGNC:53064]144290.0000.1867No
50LINC02197long intergenic non-protein coding RNA 2197 [Source:HGNC Symbol;Acc:HGNC:53063]144340.0000.1865No
51RNU6-658PRNA, U6 small nuclear 658, pseudogene [Source:HGNC Symbol;Acc:HGNC:47621]160140.0000.1438No
52SNORA47small nucleolar RNA, H/ACA box 47 [Source:HGNC Symbol;Acc:HGNC:32640]161290.0000.1408No
53AC026725.1novel transcript163060.0000.1360No
54F2Rcoagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]164980.0000.1308No
55RNU6-680PRNA, U6 small nuclear 680, pseudogene [Source:HGNC Symbol;Acc:HGNC:47643]165400.0000.1297No
56RNU6ATAC36PRNA, U6atac small nuclear 36, pseudogene [Source:HGNC Symbol;Acc:HGNC:46935]177480.0000.0971No
57GTF2H2general transcription factor IIH subunit 2 [Source:HGNC Symbol;Acc:HGNC:4656]178630.0000.0940No
58BCL9P1BCL9 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:51328]180220.0000.0897No
59RNA5SP186RNA, 5S ribosomal pseudogene 186 [Source:HGNC Symbol;Acc:HGNC:43086]188620.0000.0670No
60ANKDD1Bankyrin repeat and death domain containing 1B [Source:HGNC Symbol;Acc:HGNC:32525]190690.0000.0614No
61GCNT4glucosaminyl (N-acetyl) transferase 4 [Source:HGNC Symbol;Acc:HGNC:17973]193040.0000.0551No
62RN7SL153PRNA, 7SL, cytoplasmic 153, pseudogene [Source:HGNC Symbol;Acc:HGNC:46169]193370.0000.0543No
63FOXD1-AS1FOXD1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50658]197500.0000.0431No
64RPL7P22ribosomal protein L7 pseudogene 22 [Source:HGNC Symbol;Acc:HGNC:35802]204340.0000.0246No
65FOXD1forkhead box D1 [Source:HGNC Symbol;Acc:HGNC:3802]207530.0000.0160No
66AC116345.3novel transcript212800.0000.0018No
67RN7SL208PRNA, 7SL, cytoplasmic 208, pseudogene [Source:HGNC Symbol;Acc:HGNC:46224]214580.000-0.0030No
68FAM169Afamily with sequence similarity 169 member A [Source:HGNC Symbol;Acc:HGNC:29138]219920.000-0.0174No
69HMGN1P12high mobility group nucleosome binding domain 1 pseudogene 12 [Source:HGNC Symbol;Acc:HGNC:39356]221370.000-0.0213No
70YBX1P5Y-box binding protein 1 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:42426]222560.000-0.0245No
71RNU7-175PRNA, U7 small nuclear 175 pseudogene [Source:HGNC Symbol;Acc:HGNC:45709]223170.000-0.0261No
72GUSBP9GUSB pseudogene 9 [Source:HGNC Symbol;Acc:HGNC:42323]225880.000-0.0334No
73GUSBP3GUSB pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:37301]225890.000-0.0334No
74CDH12P1cadherin 12 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:37698]226440.000-0.0349No
75CDH12P2cadherin 12 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:1752]226460.000-0.0349No
76CDH12P3cadherin 12 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:37699]226470.000-0.0349No
77CDH12P4cadherin 12 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:37700]226480.000-0.0349No
78SMN2survival of motor neuron 2, centromeric [Source:HGNC Symbol;Acc:HGNC:11118]227560.000-0.0378No
79RNU6-1232PRNA, U6 small nuclear 1232, pseudogene [Source:HGNC Symbol;Acc:HGNC:48195]232010.000-0.0498No
80ARHGEF28Rho guanine nucleotide exchange factor 28 [Source:HGNC Symbol;Acc:HGNC:30322]232760.000-0.0518No
81OCLNoccludin [Source:HGNC Symbol;Acc:HGNC:8104]235100.000-0.0581No
82MIR4803microRNA 4803 [Source:HGNC Symbol;Acc:HGNC:41568]237260.000-0.0639No
83MIR4804microRNA 4804 [Source:HGNC Symbol;Acc:HGNC:41720]237280.000-0.0639No
84RN7SL616PRNA, 7SL, cytoplasmic 616, pseudogene [Source:HGNC Symbol;Acc:HGNC:46632]259640.000-0.1244No
85F2RL1F2R like trypsin receptor 1 [Source:HGNC Symbol;Acc:HGNC:3538]261070.000-0.1282No
86F2RL2coagulation factor II thrombin receptor like 2 [Source:HGNC Symbol;Acc:HGNC:3539]261140.000-0.1284No
87LINC02056long intergenic non-protein coding RNA 2056 [Source:HGNC Symbol;Acc:HGNC:52898]264660.000-0.1379No
88MARVELD2MARVEL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26401]266490.000-0.1428No
89RNU6-724PRNA, U6 small nuclear 724, pseudogene [Source:HGNC Symbol;Acc:HGNC:47687]270190.000-0.1528No
90SERF1Asmall EDRK-rich factor 1A [Source:HGNC Symbol;Acc:HGNC:10755]275170.000-0.1662No
91SERF1Bsmall EDRK-rich factor 1B [Source:HGNC Symbol;Acc:HGNC:10756]275190.000-0.1663No
92PIK3R1phosphoinositide-3-kinase regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:8979]28949-0.162-0.2024No
93EEF1B2P2eukaryotic translation elongation factor 1 beta 2 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:3209]28995-0.173-0.2010No
94POLKDNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]29086-0.200-0.2004No
95BDP1B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB [Source:HGNC Symbol;Acc:HGNC:13652]29237-0.229-0.2009No
96TNPO1transportin 1 [Source:HGNC Symbol;Acc:HGNC:6401]29321-0.247-0.1994No
97SV2Csynaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]29360-0.259-0.1965No
98CERT1ceramide transporter 1 [Source:HGNC Symbol;Acc:HGNC:2205]29426-0.278-0.1940No
99SLC30A5solute carrier family 30 member 5 [Source:HGNC Symbol;Acc:HGNC:19089]29520-0.304-0.1918No
100HMGB1P35high mobility group box 1 pseudogene 35 [Source:HGNC Symbol;Acc:HGNC:39175]29775-0.320-0.1938No
101PDCD5P2programmed cell death 5 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:49886]29800-0.320-0.1896No
102CHCHD2P2coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39586]29806-0.320-0.1848No
103ZBED3zinc finger BED-type containing 3 [Source:HGNC Symbol;Acc:HGNC:20711]29915-0.320-0.1828No
104CENPHcentromere protein H [Source:HGNC Symbol;Acc:HGNC:17268]29920-0.320-0.1780No
105RPL27AP5ribosomal protein L27a pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:36420]30336-0.402-0.1831No
106CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]30420-0.426-0.1788No
107POC5POC5 centriolar protein [Source:HGNC Symbol;Acc:HGNC:26658]30871-0.550-0.1826No
108MRPS36mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]31850-0.832-0.1963No
109NSA2NSA2 ribosome biogenesis factor [Source:HGNC Symbol;Acc:HGNC:30728]32293-0.967-0.1935No
110GFM2GTP dependent ribosome recycling factor mitochondrial 2 [Source:HGNC Symbol;Acc:HGNC:29682]32528-1.026-0.1841No
111MCCC2methylcrotonoyl-CoA carboxylase 2 [Source:HGNC Symbol;Acc:HGNC:6937]32877-1.157-0.1758No
112PTCD2pentatricopeptide repeat domain 2 [Source:HGNC Symbol;Acc:HGNC:25734]33143-1.260-0.1637No
113SMN1survival of motor neuron 1, telomeric [Source:HGNC Symbol;Acc:HGNC:11117]33544-1.411-0.1529No
114ZNF366zinc finger protein 366 [Source:HGNC Symbol;Acc:HGNC:18316]33736-1.488-0.1353No
115FCHO2FCH and mu domain containing endocytic adaptor 2 [Source:HGNC Symbol;Acc:HGNC:25180]33977-1.607-0.1172No
116FUNDC2P1FUN14 domain containing 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:17253]34792-1.971-0.1091No
117ANKRA2ankyrin repeat family A member 2 [Source:HGNC Symbol;Acc:HGNC:13208]35167-2.220-0.0852No
118HEXBhexosaminidase subunit beta [Source:HGNC Symbol;Acc:HGNC:4879]35691-2.606-0.0595No
119PDE8Bphosphodiesterase 8B [Source:HGNC Symbol;Acc:HGNC:8794]35806-2.705-0.0212No
120ENC1ectodermal-neural cortex 1 [Source:HGNC Symbol;Acc:HGNC:3345]36602-3.6510.0132No
Table: GSEA details [plain text format]



Fig 2: CHR5Q13   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR5Q13: Random ES distribution   
Gene set null distribution of ES for CHR5Q13