Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetNEMETH_INFLAMMATORY_RESPONSE_LPS_UP
Enrichment Score (ES)0.8847856
Normalized Enrichment Score (NES)2.1565504
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: NEMETH_INFLAMMATORY_RESPONSE_LPS_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1RNinterleukin 1 receptor antagonist [Source:HGNC Symbol;Acc:HGNC:6000]234.9340.0256Yes
2TNFRSF1BTNF receptor superfamily member 1B [Source:HGNC Symbol;Acc:HGNC:11917]304.8880.0515Yes
3PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]324.8870.0775Yes
4BCL6BBCL6B transcription repressor [Source:HGNC Symbol;Acc:HGNC:1002]644.6680.1015Yes
5ODC1ornithine decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:8109]1124.3950.1236Yes
6CEBPDCCAAT enhancer binding protein delta [Source:HGNC Symbol;Acc:HGNC:1835]1144.3840.1469Yes
7C3AR1complement C3a receptor 1 [Source:HGNC Symbol;Acc:HGNC:1319]1204.3560.1700Yes
8FURINfurin, paired basic amino acid cleaving enzyme [Source:HGNC Symbol;Acc:HGNC:8568]1364.2830.1924Yes
9TNFtumor necrosis factor [Source:HGNC Symbol;Acc:HGNC:11892]1444.2210.2146Yes
10SLC11A1solute carrier family 11 member 1 [Source:HGNC Symbol;Acc:HGNC:10907]1614.1110.2361Yes
11BCL2L1BCL2 like 1 [Source:HGNC Symbol;Acc:HGNC:992]1913.9770.2565Yes
12SLFN12schlafen family member 12 [Source:HGNC Symbol;Acc:HGNC:25500]2073.8850.2767Yes
13RGS16regulator of G protein signaling 16 [Source:HGNC Symbol;Acc:HGNC:9997]2213.8400.2968Yes
14IRGMimmunity related GTPase M [Source:HGNC Symbol;Acc:HGNC:29597]2403.7560.3163Yes
15NFKB1nuclear factor kappa B subunit 1 [Source:HGNC Symbol;Acc:HGNC:7794]2603.6370.3352Yes
16TNIP1TNFAIP3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16903]2783.5680.3537Yes
17STAT1signal transducer and activator of transcription 1 [Source:HGNC Symbol;Acc:HGNC:11362]3103.4340.3712Yes
18MARCKSL1MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]3443.3460.3881Yes
19RHOCras homolog family member C [Source:HGNC Symbol;Acc:HGNC:669]3533.3170.4055Yes
20SQSTM1sequestosome 1 [Source:HGNC Symbol;Acc:HGNC:11280]3623.2990.4229Yes
21HCKHCK proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:4840]3643.2900.4403Yes
22NFKBIANFKB inhibitor alpha [Source:HGNC Symbol;Acc:HGNC:7797]3773.2620.4574Yes
23PNPpurine nucleoside phosphorylase [Source:HGNC Symbol;Acc:HGNC:7892]4173.1680.4732Yes
24TXNRD1thioredoxin reductase 1 [Source:HGNC Symbol;Acc:HGNC:12437]4203.1670.4900Yes
25IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]4693.1030.5052Yes
26GCH1GTP cyclohydrolase 1 [Source:HGNC Symbol;Acc:HGNC:4193]4763.0820.5215Yes
27IER3immediate early response 3 [Source:HGNC Symbol;Acc:HGNC:5392]4903.0440.5373Yes
28CLEC4DC-type lectin domain family 4 member D [Source:HGNC Symbol;Acc:HGNC:14554]5062.9990.5529Yes
29STK10serine/threonine kinase 10 [Source:HGNC Symbol;Acc:HGNC:11388]5192.9680.5683Yes
30ETS2ETS proto-oncogene 2, transcription factor [Source:HGNC Symbol;Acc:HGNC:3489]5372.9390.5835Yes
31CD44CD44 molecule (Indian blood group) [Source:HGNC Symbol;Acc:HGNC:1681]5502.9060.5987Yes
32CFLARCASP8 and FADD like apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:1876]6262.7800.6114Yes
33SRGNserglycin [Source:HGNC Symbol;Acc:HGNC:9361]6382.7560.6258Yes
34SLFN12Lschlafen family member 12 like [Source:HGNC Symbol;Acc:HGNC:33920]6452.7470.6403Yes
35GLRXglutaredoxin [Source:HGNC Symbol;Acc:HGNC:4330]6672.7110.6541Yes
36GKglycerol kinase [Source:HGNC Symbol;Acc:HGNC:4289]6712.7060.6685Yes
37IER2immediate early response 2 [Source:HGNC Symbol;Acc:HGNC:28871]6982.6430.6818Yes
38MSR1macrophage scavenger receptor 1 [Source:HGNC Symbol;Acc:HGNC:7376]7202.6000.6951Yes
39ATF3activating transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:785]7762.5080.7070Yes
40TGFB1transforming growth factor beta 1 [Source:HGNC Symbol;Acc:HGNC:11766]7842.4960.7201Yes
41PMLpromyelocytic leukemia [Source:HGNC Symbol;Acc:HGNC:9113]8122.4490.7324Yes
42TRIM25tripartite motif containing 25 [Source:HGNC Symbol;Acc:HGNC:12932]8422.3840.7443Yes
43IFRD1interferon related developmental regulator 1 [Source:HGNC Symbol;Acc:HGNC:5456]8442.3820.7569Yes
44LCP2lymphocyte cytosolic protein 2 [Source:HGNC Symbol;Acc:HGNC:6529]8872.2950.7680Yes
45MYO10myosin X [Source:HGNC Symbol;Acc:HGNC:7593]8892.2930.7802Yes
46ADARadenosine deaminase RNA specific [Source:HGNC Symbol;Acc:HGNC:225]10492.1370.7873Yes
47HCLS1hematopoietic cell-specific Lyn substrate 1 [Source:HGNC Symbol;Acc:HGNC:4844]12101.9390.7933Yes
48RNF11ring finger protein 11 [Source:HGNC Symbol;Acc:HGNC:10056]12291.9250.8030Yes
49APBB1IPamyloid beta precursor protein binding family B member 1 interacting protein [Source:HGNC Symbol;Acc:HGNC:17379]13161.8600.8106Yes
50ACSL4acyl-CoA synthetase long chain family member 4 [Source:HGNC Symbol;Acc:HGNC:3571]13351.8340.8199Yes
51SLC20A1solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]13451.8240.8293Yes
52SLC2A1solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]14641.7100.8352Yes
53DEGS1delta 4-desaturase, sphingolipid 1 [Source:HGNC Symbol;Acc:HGNC:13709]14821.6940.8438Yes
54TAP1transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]15151.6720.8518Yes
55ETF1eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]15241.6690.8605Yes
56CLN3CLN3 lysosomal/endosomal transmembrane protein, battenin [Source:HGNC Symbol;Acc:HGNC:2074]18851.4330.8584Yes
57HMGCR3-hydroxy-3-methylglutaryl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:5006]21541.3710.8585Yes
58DAB2DAB adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:2662]22881.2820.8617Yes
59MAP2K1mitogen-activated protein kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6840]23271.2570.8674Yes
60EIF1eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:HGNC:3249]23691.2310.8728Yes
61TPST1tyrosylprotein sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:12020]26531.0870.8709Yes
62MLLT11MLLT11 transcription factor 7 cofactor [Source:HGNC Symbol;Acc:HGNC:16997]26621.0830.8765Yes
63JUNDJunD proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:6206]27561.0430.8795Yes
64WSB1WD repeat and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:19221]28201.0130.8832Yes
65MYADMmyeloid associated differentiation marker [Source:HGNC Symbol;Acc:HGNC:7544]29500.9510.8848Yes
66TOP1DNA topoisomerase I [Source:HGNC Symbol;Acc:HGNC:11986]32820.8420.8803No
67SAT1spermidine/spermine N1-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10540]36190.7200.8751No
68CCL23C-C motif chemokine ligand 23 [Source:HGNC Symbol;Acc:HGNC:10622]64400.0000.7989No
69TNFSF9TNF superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11939]89670.0000.7306No
70IFI16interferon gamma inducible protein 16 [Source:HGNC Symbol;Acc:HGNC:5395]115690.0000.6603No
71FCGR2BFc fragment of IgG receptor IIb [Source:HGNC Symbol;Acc:HGNC:3618]115830.0000.6600No
72CDKN1Acyclin dependent kinase inhibitor 1A [Source:HGNC Symbol;Acc:HGNC:1784]126660.0000.6307No
73LILRB4leukocyte immunoglobulin like receptor B4 [Source:HGNC Symbol;Acc:HGNC:6608]135050.0000.6081No
74SLPIsecretory leukocyte peptidase inhibitor [Source:HGNC Symbol;Acc:HGNC:11092]224430.0000.3666No
75CASP4caspase 4 [Source:HGNC Symbol;Acc:HGNC:1505]241660.0000.3201No
76CCL3C-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:10627]279590.0000.2176No
77MAPKAPK2MAPK activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]28507-0.0390.2030No
78PRKCDprotein kinase C delta [Source:HGNC Symbol;Acc:HGNC:9399]28553-0.0520.2021No
79RCN1reticulocalbin 1 [Source:HGNC Symbol;Acc:HGNC:9934]29391-0.2690.1809No
80LTBlymphotoxin beta [Source:HGNC Symbol;Acc:HGNC:6711]30273-0.3860.1591No
81KPNA3karyopherin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6396]30312-0.3940.1602No
82SAP30Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]30979-0.5810.1453No
83PIP5K1Bphosphatidylinositol-4-phosphate 5-kinase type 1 beta [Source:HGNC Symbol;Acc:HGNC:8995]31590-0.7630.1329No
84CITED2Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 [Source:HGNC Symbol;Acc:HGNC:1987]32427-1.0110.1157No
85MT1Xmetallothionein 1X [Source:HGNC Symbol;Acc:HGNC:7405]34569-1.9360.0681No
Table: GSEA details [plain text format]



Fig 2: NEMETH_INFLAMMATORY_RESPONSE_LPS_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: NEMETH_INFLAMMATORY_RESPONSE_LPS_UP: Random ES distribution   
Gene set null distribution of ES for NEMETH_INFLAMMATORY_RESPONSE_LPS_UP