Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetGGGNNTTTCC_NFKB_Q6_01
Enrichment Score (ES)0.5032953
Normalized Enrichment Score (NES)1.2943649
Nominal p-value0.0121951215
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: GGGNNTTTCC_NFKB_Q6_01   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1RNinterleukin 1 receptor antagonist [Source:HGNC Symbol;Acc:HGNC:6000]234.9340.0290Yes
2TNFRSF1BTNF receptor superfamily member 1B [Source:HGNC Symbol;Acc:HGNC:11917]304.8880.0581Yes
3CCL5C-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10632]314.8880.0875Yes
4BCL6BBCL6B transcription repressor [Source:HGNC Symbol;Acc:HGNC:1002]644.6680.1146Yes
5CCDC80coiled-coil domain containing 80 [Source:HGNC Symbol;Acc:HGNC:30649]694.6340.1423Yes
6BCL3BCL3 transcription coactivator [Source:HGNC Symbol;Acc:HGNC:998]1024.4670.1682Yes
7TFECtranscription factor EC [Source:HGNC Symbol;Acc:HGNC:11754]1234.3380.1937Yes
8BATFbasic leucine zipper ATF-like transcription factor [Source:HGNC Symbol;Acc:HGNC:958]2383.7740.2133Yes
9TNIP1TNFAIP3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16903]2783.5680.2336Yes
10CD86CD86 molecule [Source:HGNC Symbol;Acc:HGNC:1705]3563.3060.2514Yes
11NFKBIANFKB inhibitor alpha [Source:HGNC Symbol;Acc:HGNC:7797]3773.2620.2704Yes
12RELREL proto-oncogene, NF-kB subunit [Source:HGNC Symbol;Acc:HGNC:9954]4043.2040.2890Yes
13CCND2cyclin D2 [Source:HGNC Symbol;Acc:HGNC:1583]4073.1970.3081Yes
14EHD1EH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:3242]5812.8180.3203Yes
15IPO4importin 4 [Source:HGNC Symbol;Acc:HGNC:19426]7282.5850.3319Yes
16NFKB2nuclear factor kappa B subunit 2 [Source:HGNC Symbol;Acc:HGNC:7795]7432.5570.3468Yes
17KYkyphoscoliosis peptidase [Source:HGNC Symbol;Acc:HGNC:26576]7732.5120.3611Yes
18SH2B3SH2B adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:29605]8682.3390.3726Yes
19PTGESprostaglandin E synthase [Source:HGNC Symbol;Acc:HGNC:9599]9212.2520.3847Yes
20MT2Ametallothionein 2A [Source:HGNC Symbol;Acc:HGNC:7406]12341.9140.3878Yes
21FHL3four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]13051.8660.3971Yes
22RYBPRING1 and YY1 binding protein [Source:HGNC Symbol;Acc:HGNC:10480]14831.6940.4024Yes
23ORAI1ORAI calcium release-activated calcium modulator 1 [Source:HGNC Symbol;Acc:HGNC:25896]15161.6710.4116Yes
24RAP2CRAP2C, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21165]15931.6150.4192Yes
25TNFSF15TNF superfamily member 15 [Source:HGNC Symbol;Acc:HGNC:11931]16091.5990.4284Yes
26CPEB4cytoplasmic polyadenylation element binding protein 4 [Source:HGNC Symbol;Acc:HGNC:21747]17031.5330.4351Yes
27PFN1profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]18981.4270.4384Yes
28CXCR5C-X-C motif chemokine receptor 5 [Source:HGNC Symbol;Acc:HGNC:1060]20221.3760.4433Yes
29WNT10AWnt family member 10A [Source:HGNC Symbol;Acc:HGNC:13829]24471.1940.4390Yes
30LASP1LIM and SH3 protein 1 [Source:HGNC Symbol;Acc:HGNC:6513]24871.1740.4450Yes
31G3BP1G3BP stress granule assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:30292]24981.1680.4518Yes
32GDPD5glycerophosphodiester phosphodiesterase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28804]25561.1350.4570Yes
33TCEA2transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]27621.0410.4577Yes
34CNIH2cornichon family AMPA receptor auxiliary protein 2 [Source:HGNC Symbol;Acc:HGNC:28744]28321.0110.4619Yes
35ZFAND3zinc finger AN1-type containing 3 [Source:HGNC Symbol;Acc:HGNC:18019]28710.9880.4668Yes
36UBE2Mubiquitin conjugating enzyme E2 M [Source:HGNC Symbol;Acc:HGNC:12491]28970.9780.4720Yes
37SLAMF8SLAM family member 8 [Source:HGNC Symbol;Acc:HGNC:21391]29070.9750.4776Yes
38IL6interleukin 6 [Source:HGNC Symbol;Acc:HGNC:6018]29100.9740.4834Yes
39IER5immediate early response 5 [Source:HGNC Symbol;Acc:HGNC:5393]29160.9710.4891Yes
40MYADMmyeloid associated differentiation marker [Source:HGNC Symbol;Acc:HGNC:7544]29500.9510.4939Yes
41E2F3E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]31680.8810.4933Yes
42TPM3tropomyosin 3 [Source:HGNC Symbol;Acc:HGNC:12012]31820.8740.4982Yes
43BMP2KBMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]31890.8720.5033Yes
44RASSF2Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]34180.7960.5019No
45SMPD3sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]37770.6870.4963No
46TNKS1BP1tankyrase 1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:19081]37810.6860.5004No
47HSPG2heparan sulfate proteoglycan 2 [Source:HGNC Symbol;Acc:HGNC:5273]46020.4410.4808No
48ETV1ETS variant transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3490]47230.4090.4800No
49STAT6signal transducer and activator of transcription 6 [Source:HGNC Symbol;Acc:HGNC:11368]48640.3800.4785No
50N4BP1NEDD4 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:29850]49120.3650.4794No
51BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]50090.3360.4789No
52RELBRELB proto-oncogene, NF-kB subunit [Source:HGNC Symbol;Acc:HGNC:9956]53710.2460.4706No
53RBMS1RNA binding motif single stranded interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9907]53840.2420.4717No
54WRAP53WD repeat containing antisense to TP53 [Source:HGNC Symbol;Acc:HGNC:25522]56240.1830.4663No
55RPS6KA4ribosomal protein S6 kinase A4 [Source:HGNC Symbol;Acc:HGNC:10433]59870.1010.4571No
56UPF2UPF2 regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]60630.0800.4556No
57MAML2mastermind like transcriptional coactivator 2 [Source:HGNC Symbol;Acc:HGNC:16259]61060.0650.4548No
58GREM1gremlin 1, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:2001]83350.0000.3946No
59POU2F3POU class 2 homeobox 3 [Source:HGNC Symbol;Acc:HGNC:19864]85320.0000.3893No
60PRR34PRR34 long non-coding RNA [Source:HGNC Symbol;Acc:HGNC:25606]89720.0000.3774No
61MADCAM1mucosal vascular addressin cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:6765]92340.0000.3703No
62TNFRSF9TNF receptor superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11924]98550.0000.3535No
63KCNS3potassium voltage-gated channel modifier subfamily S member 3 [Source:HGNC Symbol;Acc:HGNC:6302]99710.0000.3504No
64IL1RAPL1interleukin 1 receptor accessory protein like 1 [Source:HGNC Symbol;Acc:HGNC:5996]104780.0000.3367No
65NRIP2nuclear receptor interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:23078]109020.0000.3253No
66NTRK3neurotrophic receptor tyrosine kinase 3 [Source:HGNC Symbol;Acc:HGNC:8033]110270.0000.3219No
67SP6Sp6 transcription factor [Source:HGNC Symbol;Acc:HGNC:14530]124260.0000.2841No
68MSX1msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391]125490.0000.2808No
69UBDubiquitin D [Source:HGNC Symbol;Acc:HGNC:18795]128480.0000.2727No
70GATA4GATA binding protein 4 [Source:HGNC Symbol;Acc:HGNC:4173]135970.0000.2525No
71TLX1T cell leukemia homeobox 1 [Source:HGNC Symbol;Acc:HGNC:5056]144160.0000.2304No
72PCSK2proprotein convertase subtilisin/kexin type 2 [Source:HGNC Symbol;Acc:HGNC:8744]162730.0000.1801No
73IL2interleukin 2 [Source:HGNC Symbol;Acc:HGNC:6001]177540.0000.1401No
74LPOlactoperoxidase [Source:HGNC Symbol;Acc:HGNC:6678]187460.0000.1133No
75MSCmusculin [Source:HGNC Symbol;Acc:HGNC:7321]191250.0000.1031No
76BNC2basonuclin 2 [Source:HGNC Symbol;Acc:HGNC:30988]193460.0000.0971No
77NR2F2nuclear receptor subfamily 2 group F member 2 [Source:HGNC Symbol;Acc:HGNC:7976]196420.0000.0891No
78CNTFciliary neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:2169]201710.0000.0748No
79C1QL1complement C1q like 1 [Source:HGNC Symbol;Acc:HGNC:24182]203220.0000.0708No
80ENTHD1ENTH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26352]204940.0000.0662No
81FOXS1forkhead box S1 [Source:HGNC Symbol;Acc:HGNC:3735]205390.0000.0650No
82LAMA1laminin subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:6481]208440.0000.0567No
83NRGNneurogranin [Source:HGNC Symbol;Acc:HGNC:8000]212950.0000.0446No
84FTHL17ferritin heavy chain like 17 [Source:HGNC Symbol;Acc:HGNC:3987]215630.0000.0373No
85FGF1fibroblast growth factor 1 [Source:HGNC Symbol;Acc:HGNC:3665]227120.0000.0063No
86SOX5SRY-box transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:11201]234890.000-0.0147No
87ZNF532zinc finger protein 532 [Source:HGNC Symbol;Acc:HGNC:30940]268140.000-0.1047No
88CD70CD70 molecule [Source:HGNC Symbol;Acc:HGNC:11937]281140.000-0.1398No
89RSPRY1ring finger and SPRY domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29420]28471-0.027-0.1493No
90TP53tumor protein p53 [Source:HGNC Symbol;Acc:HGNC:11998]28514-0.040-0.1502No
91ARID1AAT-rich interaction domain 1A [Source:HGNC Symbol;Acc:HGNC:11110]28604-0.064-0.1522No
92PPP2R5Eprotein phosphatase 2 regulatory subunit B'epsilon [Source:HGNC Symbol;Acc:HGNC:9313]28751-0.110-0.1555No
93DCLK1doublecortin like kinase 1 [Source:HGNC Symbol;Acc:HGNC:2700]28894-0.148-0.1585No
94UBE2Hubiquitin conjugating enzyme E2 H [Source:HGNC Symbol;Acc:HGNC:12484]29084-0.199-0.1624No
95PLXNB1plexin B1 [Source:HGNC Symbol;Acc:HGNC:9103]29092-0.201-0.1614No
96GPR182G protein-coupled receptor 182 [Source:HGNC Symbol;Acc:HGNC:13708]29220-0.226-0.1634No
97FUT7fucosyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4018]29517-0.303-0.1696No
98LTBlymphotoxin beta [Source:HGNC Symbol;Acc:HGNC:6711]30273-0.386-0.1877No
99PSME3IP1proteasome activator subunit 3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29856]31000-0.590-0.2038No
100ENO3enolase 3 [Source:HGNC Symbol;Acc:HGNC:3354]31335-0.682-0.2088No
101CDC27cell division cycle 27 [Source:HGNC Symbol;Acc:HGNC:1728]31586-0.760-0.2110No
102MIDEASmitotic deacetylase associated SANT domain protein [Source:HGNC Symbol;Acc:HGNC:19853]31799-0.816-0.2118No
103CNTNAP1contactin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:8011]31920-0.855-0.2100No
104JAK3Janus kinase 3 [Source:HGNC Symbol;Acc:HGNC:6193]32233-0.949-0.2127No
105TUBA1Atubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]32238-0.950-0.2071No
106SLC25A18solute carrier family 25 member 18 [Source:HGNC Symbol;Acc:HGNC:10988]32298-0.969-0.2029No
107CREB1cAMP responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2345]32355-0.986-0.1985No
108SLC12A2solute carrier family 12 member 2 [Source:HGNC Symbol;Acc:HGNC:10911]32400-1.001-0.1937No
109SH3KBP1SH3 domain containing kinase binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13867]32588-1.046-0.1925No
110CCDC107coiled-coil domain containing 107 [Source:HGNC Symbol;Acc:HGNC:28465]32677-1.079-0.1884No
111CD74CD74 molecule [Source:HGNC Symbol;Acc:HGNC:1697]32902-1.167-0.1874No
112GEMGTP binding protein overexpressed in skeletal muscle [Source:HGNC Symbol;Acc:HGNC:4234]32919-1.171-0.1808No
113PKN1protein kinase N1 [Source:HGNC Symbol;Acc:HGNC:9405]32924-1.173-0.1739No
114SLC44A1solute carrier family 44 member 1 [Source:HGNC Symbol;Acc:HGNC:18798]32969-1.192-0.1679No
115PNKDPNKD metallo-beta-lactamase domain containing [Source:HGNC Symbol;Acc:HGNC:9153]33206-1.289-0.1666No
116ALG6ALG6 alpha-1,3-glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:23157]33533-1.403-0.1670No
117STX4syntaxin 4 [Source:HGNC Symbol;Acc:HGNC:11439]33609-1.439-0.1604No
118NFAT5nuclear factor of activated T cells 5 [Source:HGNC Symbol;Acc:HGNC:7774]33823-1.532-0.1570No
119KAT7lysine acetyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:17016]34000-1.621-0.1520No
120CCR10C-C motif chemokine receptor 10 [Source:HGNC Symbol;Acc:HGNC:4474]34434-1.845-0.1526No
121CSF2RBcolony stimulating factor 2 receptor subunit beta [Source:HGNC Symbol;Acc:HGNC:2436]34685-1.945-0.1477No
122SLC6A12solute carrier family 6 member 12 [Source:HGNC Symbol;Acc:HGNC:11045]34800-1.979-0.1389No
123CYLDCYLD lysine 63 deubiquitinase [Source:HGNC Symbol;Acc:HGNC:2584]34838-2.004-0.1279No
124HOXA4homeobox A4 [Source:HGNC Symbol;Acc:HGNC:5105]35040-2.130-0.1206No
125HIVEP1HIVEP zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:4920]35280-2.294-0.1133No
126S1PR2sphingosine-1-phosphate receptor 2 [Source:HGNC Symbol;Acc:HGNC:3169]35525-2.468-0.1051No
127CHD6chromodomain helicase DNA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:19057]35612-2.535-0.0922No
128LIX1Llimb and CNS expressed 1 like [Source:HGNC Symbol;Acc:HGNC:28715]35771-2.672-0.0804No
129CALCOCO1calcium binding and coiled-coil domain 1 [Source:HGNC Symbol;Acc:HGNC:29306]35903-2.735-0.0676No
130TOM1L1target of myb1 like 1 membrane trafficking protein [Source:HGNC Symbol;Acc:HGNC:11983]35904-2.735-0.0512No
131CSF1Rcolony stimulating factor 1 receptor [Source:HGNC Symbol;Acc:HGNC:2433]35954-2.799-0.0357No
132TRIM47tripartite motif containing 47 [Source:HGNC Symbol;Acc:HGNC:19020]36360-3.281-0.0270No
133FAM117Afamily with sequence similarity 117 member A [Source:HGNC Symbol;Acc:HGNC:24179]36534-3.519-0.0105No
134ENKD1enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]36912-4.2590.0048No
Table: GSEA details [plain text format]



Fig 2: GGGNNTTTCC_NFKB_Q6_01   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GGGNNTTTCC_NFKB_Q6_01: Random ES distribution   
Gene set null distribution of ES for GGGNNTTTCC_NFKB_Q6_01