Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetGNF2_CCNA2
Enrichment Score (ES)-0.82671386
Normalized Enrichment Score (NES)-1.703765
Nominal p-value0.0
FDR q-value0.0027123098
FWER p-Value0.006
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_CCNA2   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]35380.752-0.0890No
2MT1JPmetallothionein 1J, pseudogene [Source:HGNC Symbol;Acc:HGNC:7402]159080.000-0.4231No
3ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]235090.000-0.6284No
4CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]28769-0.115-0.7694No
5KIF20Akinesin family member 20A [Source:HGNC Symbol;Acc:HGNC:9787]29461-0.290-0.7856No
6HJURPHolliday junction recognition protein [Source:HGNC Symbol;Acc:HGNC:25444]29943-0.320-0.7958No
7FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]30083-0.340-0.7965No
8HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]30110-0.349-0.7942No
9CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]30121-0.351-0.7914No
10TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]30615-0.478-0.8006No
11ESPL1extra spindle pole bodies like 1, separase [Source:HGNC Symbol;Acc:HGNC:16856]31169-0.633-0.8100No
12AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]31203-0.642-0.8053No
13CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]31998-0.873-0.8191Yes
14MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]32174-0.931-0.8157Yes
15ASF1Banti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]32405-1.003-0.8132Yes
16RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]32433-1.015-0.8051Yes
17UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]32593-1.049-0.8002Yes
18PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]32612-1.058-0.7915Yes
19TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]32628-1.064-0.7826Yes
20PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]32872-1.155-0.7791Yes
21CENPAcentromere protein A [Source:HGNC Symbol;Acc:HGNC:1851]33007-1.207-0.7722Yes
22FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]33141-1.259-0.7648Yes
23BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]33403-1.341-0.7602Yes
24SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]33583-1.426-0.7526Yes
25CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]33668-1.457-0.7421Yes
26CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]33695-1.469-0.7300Yes
27KIF4Akinesin family member 4A [Source:HGNC Symbol;Acc:HGNC:13339]33702-1.472-0.7173Yes
28KIF18Bkinesin family member 18B [Source:HGNC Symbol;Acc:HGNC:27102]33792-1.517-0.7065Yes
29BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]33841-1.541-0.6944Yes
30CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]34050-1.644-0.6857Yes
31PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]34106-1.671-0.6726Yes
32SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]34241-1.737-0.6611Yes
33RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]34281-1.756-0.6468Yes
34NCAPGnon-SMC condensin I complex subunit G [Source:HGNC Symbol;Acc:HGNC:24304]34387-1.816-0.6338Yes
35CDCA3cell division cycle associated 3 [Source:HGNC Symbol;Acc:HGNC:14624]34458-1.861-0.6195Yes
36PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34472-1.873-0.6035Yes
37MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34493-1.883-0.5876Yes
38MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]34557-1.928-0.5725Yes
39EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]34559-1.929-0.5557Yes
40KIF14kinesin family member 14 [Source:HGNC Symbol;Acc:HGNC:19181]34827-1.996-0.5455Yes
41RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]34869-2.020-0.5290Yes
42KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]34903-2.041-0.5121Yes
43SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]34967-2.085-0.4956Yes
44TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35009-2.109-0.4783Yes
45PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35024-2.115-0.4603Yes
46NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]35034-2.123-0.4420Yes
47CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]35057-2.142-0.4239Yes
48DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35073-2.150-0.4056Yes
49RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]35074-2.151-0.3868Yes
50RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35109-2.175-0.3688Yes
51AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]35118-2.180-0.3500Yes
52TMPOthymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]35150-2.203-0.3316Yes
53TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]35199-2.244-0.3134Yes
54NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]35206-2.250-0.2939Yes
55CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]35334-2.329-0.2770Yes
56NCAPD2non-SMC condensin I complex subunit D2 [Source:HGNC Symbol;Acc:HGNC:24305]35551-2.485-0.2612Yes
57MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]35642-2.564-0.2413Yes
58GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]35670-2.585-0.2195Yes
59RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]35689-2.604-0.1972Yes
60HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]35737-2.641-0.1755Yes
61MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]35760-2.660-0.1529Yes
62H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]35972-2.829-0.1339Yes
63ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36035-2.919-0.1101Yes
64FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36042-2.928-0.0848Yes
65MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36044-2.930-0.0592Yes
66E2F8E2F transcription factor 8 [Source:HGNC Symbol;Acc:HGNC:24727]36073-2.962-0.0342Yes
67MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]36312-3.201-0.0127Yes
68GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]36724-3.8630.0099Yes
Table: GSEA details [plain text format]



Fig 2: GNF2_CCNA2   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_CCNA2: Random ES distribution   
Gene set null distribution of ES for GNF2_CCNA2