Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #WT_GAQ_versus_WT_NA.Nof1.cls #WT_GAQ_versus_WT_NA_repos |
| Phenotype | Nof1.cls#WT_GAQ_versus_WT_NA_repos |
| Upregulated in class | WT_GAQ |
| GeneSet | GNF2_CDH11 |
| Enrichment Score (ES) | 0.80758065 |
| Normalized Enrichment Score (NES) | 1.5871868 |
| Nominal p-value | 0.035714287 |
| FDR q-value | 0.16169429 |
| FWER p-Value | 0.721 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | SERPINE1 | serpin family E member 1 [Source:HGNC Symbol;Acc:HGNC:8583] | 239 | 3.764 | 0.2641 | Yes |
| 2 | FBN1 | fibrillin 1 [Source:HGNC Symbol;Acc:HGNC:3603] | 317 | 3.408 | 0.5069 | Yes |
| 3 | LAMC1 | laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492] | 1585 | 1.624 | 0.5894 | Yes |
| 4 | SERPINH1 | serpin family H member 1 [Source:HGNC Symbol;Acc:HGNC:1546] | 1798 | 1.477 | 0.6899 | Yes |
| 5 | CALU | calumenin [Source:HGNC Symbol;Acc:HGNC:1458] | 2440 | 1.197 | 0.7586 | Yes |
| 6 | PXDN | peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966] | 3893 | 0.643 | 0.7657 | Yes |
| 7 | GFPT2 | glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242] | 3978 | 0.615 | 0.8076 | Yes |
| 8 | FN1 | fibronectin 1 [Source:HGNC Symbol;Acc:HGNC:3778] | 5177 | 0.291 | 0.7962 | No |
| 9 | RAI14 | retinoic acid induced 14 [Source:HGNC Symbol;Acc:HGNC:14873] | 6246 | 0.033 | 0.7697 | No |
| 10 | FKBP9 | FKBP prolyl isomerase 9 [Source:HGNC Symbol;Acc:HGNC:3725] | 10176 | 0.000 | 0.6637 | No |
| 11 | COL1A1 | collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197] | 12941 | 0.000 | 0.5892 | No |
| 12 | COL1A2 | collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198] | 12942 | 0.000 | 0.5892 | No |
| 13 | COL6A2 | collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212] | 18787 | 0.000 | 0.4315 | No |
| 14 | COL6A1 | collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211] | 18788 | 0.000 | 0.4315 | No |
| 15 | COL3A1 | collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201] | 19710 | 0.000 | 0.4066 | No |
| 16 | LOXL1 | lysyl oxidase like 1 [Source:HGNC Symbol;Acc:HGNC:6665] | 19884 | 0.000 | 0.4020 | No |
| 17 | LOXL2 | lysyl oxidase like 2 [Source:HGNC Symbol;Acc:HGNC:6666] | 19885 | 0.000 | 0.4020 | No |
| 18 | PTX3 | pentraxin 3 [Source:HGNC Symbol;Acc:HGNC:9692] | 20166 | 0.000 | 0.3944 | No |
| 19 | LAMB1 | laminin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6486] | 20854 | 0.000 | 0.3759 | No |
| 20 | SRPX | sushi repeat containing protein X-linked [Source:HGNC Symbol;Acc:HGNC:11309] | 24218 | 0.000 | 0.2852 | No |
| 21 | COL5A1 | collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209] | 25106 | 0.000 | 0.2612 | No |
| 22 | COL5A2 | collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210] | 25107 | 0.000 | 0.2612 | No |
| 23 | FSTL1 | follistatin like 1 [Source:HGNC Symbol;Acc:HGNC:3972] | 26301 | 0.000 | 0.2290 | No |
| 24 | THBS2 | thrombospondin 2 [Source:HGNC Symbol;Acc:HGNC:11786] | 27760 | 0.000 | 0.1897 | No |
| 25 | CDH11 | cadherin 11 [Source:HGNC Symbol;Acc:HGNC:1750] | 31938 | -0.862 | 0.1390 | No |
