Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetGNF2_RFC4
Enrichment Score (ES)-0.77670974
Normalized Enrichment Score (NES)-1.5880529
Nominal p-value0.0
FDR q-value0.014789268
FWER p-Value0.226
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_RFC4   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1DKC1dyskerin pseudouridine synthase 1 [Source:HGNC Symbol;Acc:HGNC:2890]22961.276-0.0484No
2CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]35380.752-0.0738No
3RANBP1RAN binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9847]39480.625-0.0782No
4SNRPEsmall nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:HGNC:11161]41430.564-0.0774No
5RANRAN, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9846]44650.480-0.0810No
6SNRPD1small nuclear ribonucleoprotein D1 polypeptide [Source:HGNC Symbol;Acc:HGNC:11158]56990.167-0.1125No
7ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]235090.000-0.5934No
8CCT2chaperonin containing TCP1 subunit 2 [Source:HGNC Symbol;Acc:HGNC:1615]28482-0.032-0.7273No
9CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]28769-0.115-0.7338No
10MCM10minichromosome maintenance 10 replication initiation factor [Source:HGNC Symbol;Acc:HGNC:18043]29088-0.200-0.7403No
11MLH1mutL homolog 1 [Source:HGNC Symbol;Acc:HGNC:7127]30018-0.328-0.7618No
12FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]30083-0.340-0.7599No
13SSRP1structure specific recognition protein 1 [Source:HGNC Symbol;Acc:HGNC:11327]30279-0.388-0.7611No
14CTPS1CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]30537-0.460-0.7631No
15TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]30615-0.478-0.7600No
16TIMELESStimeless circadian regulator [Source:HGNC Symbol;Acc:HGNC:11813]30948-0.574-0.7629No
17PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]31198-0.641-0.7628No
18SLBPstem-loop binding protein [Source:HGNC Symbol;Acc:HGNC:10904]31441-0.711-0.7617No
19CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]31998-0.873-0.7674Yes
20SUPT16HSPT16 homolog, facilitates chromatin remodeling subunit [Source:HGNC Symbol;Acc:HGNC:11465]31999-0.874-0.7580Yes
21MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]32174-0.931-0.7528Yes
22RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]32433-1.015-0.7489Yes
23H2AZ1H2A.Z variant histone 1 [Source:HGNC Symbol;Acc:HGNC:4741]32447-1.017-0.7384Yes
24UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]32593-1.049-0.7311Yes
25ITGB3BPintegrin subunit beta 3 binding protein [Source:HGNC Symbol;Acc:HGNC:6157]32667-1.077-0.7215Yes
26PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]32872-1.155-0.7147Yes
27FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]33141-1.259-0.7085Yes
28BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]33403-1.341-0.7012Yes
29CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]33668-1.457-0.6927Yes
30RFC5replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]33951-1.590-0.6834Yes
31KNTC1kinetochore associated 1 [Source:HGNC Symbol;Acc:HGNC:17255]33994-1.617-0.6672Yes
32RPA3replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]34095-1.662-0.6522Yes
33SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]34241-1.737-0.6375Yes
34RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]34281-1.756-0.6198Yes
35PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34472-1.873-0.6049Yes
36MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34493-1.883-0.5853Yes
37MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]34557-1.928-0.5664Yes
38GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]34589-1.943-0.5465Yes
39KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]34903-2.041-0.5331Yes
40SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]34967-2.085-0.5125Yes
41TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35009-2.109-0.4911Yes
42PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35024-2.115-0.4689Yes
43CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]35057-2.142-0.4468Yes
44RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]35074-2.151-0.4243Yes
45RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35109-2.175-0.4019Yes
46TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]35199-2.244-0.3804Yes
47NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]35206-2.250-0.3565Yes
48RAD54LRAD54 like [Source:HGNC Symbol;Acc:HGNC:9826]35241-2.264-0.3332Yes
49CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]35334-2.329-0.3108Yes
50NCAPD2non-SMC condensin I complex subunit D2 [Source:HGNC Symbol;Acc:HGNC:24305]35551-2.485-0.2901Yes
51MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]35642-2.564-0.2651Yes
52GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]35670-2.585-0.2382Yes
53ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36035-2.919-0.2168Yes
54FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36042-2.928-0.1857Yes
55PAICSphosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase [Source:HGNC Symbol;Acc:HGNC:8587]36132-3.020-0.1558Yes
56LIG1DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]36175-3.068-0.1241Yes
57MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]36312-3.201-0.0936Yes
58MSH6mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]36407-3.364-0.0602Yes
59MSH2mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]36496-3.487-0.0253Yes
60GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]36724-3.8630.0099Yes
Table: GSEA details [plain text format]



Fig 2: GNF2_RFC4   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_RFC4: Random ES distribution   
Gene set null distribution of ES for GNF2_RFC4