Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetALK_DN.V1_DN
Enrichment Score (ES)0.4436362
Normalized Enrichment Score (NES)1.1485255
Nominal p-value0.09219858
FDR q-value0.27834383
FWER p-Value0.926
Table: GSEA Results Summary



Fig 1: Enrichment plot: ALK_DN.V1_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1MX1MX dynamin like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:7532]1104.4000.0392Yes
2SLC28A2solute carrier family 28 member 2 [Source:HGNC Symbol;Acc:HGNC:11002]1584.1260.0774Yes
3SEMA3Esemaphorin 3E [Source:HGNC Symbol;Acc:HGNC:10727]2893.5370.1077Yes
4OAS12'-5'-oligoadenylate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:8086]3513.3220.1379Yes
5PRODHproline dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:9453]4323.1480.1659Yes
6ADORA3adenosine A3 receptor [Source:HGNC Symbol;Acc:HGNC:268]4643.1230.1949Yes
7MIAMIA SH3 domain containing [Source:HGNC Symbol;Acc:HGNC:7076]5652.8540.2196Yes
8PTK2Bprotein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]7352.5660.2396Yes
9MTHFRmethylenetetrahydrofolate reductase [Source:HGNC Symbol;Acc:HGNC:7436]8382.3950.2597Yes
10EFHD1EF-hand domain family member D1 [Source:HGNC Symbol;Acc:HGNC:29556]8702.3320.2812Yes
11TIAM1TIAM Rac1 associated GEF 1 [Source:HGNC Symbol;Acc:HGNC:11805]8912.2920.3026Yes
12PENKproenkephalin [Source:HGNC Symbol;Acc:HGNC:8831]11342.0180.3154Yes
13NMNAT2nicotinamide nucleotide adenylyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:16789]11821.9680.3330Yes
14ADCY2adenylate cyclase 2 [Source:HGNC Symbol;Acc:HGNC:233]12111.9380.3508Yes
15SPTBspectrin beta, erythrocytic [Source:HGNC Symbol;Acc:HGNC:11274]13221.8550.3656Yes
16LPAR2lysophosphatidic acid receptor 2 [Source:HGNC Symbol;Acc:HGNC:3168]13391.8310.3827Yes
17VAV1vav guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:12657]13441.8240.4000Yes
18IRF9interferon regulatory factor 9 [Source:HGNC Symbol;Acc:HGNC:6131]13631.8090.4168Yes
19DNASE1L2deoxyribonuclease 1 like 2 [Source:HGNC Symbol;Acc:HGNC:2958]15721.6360.4269Yes
20FZD8frizzled class receptor 8 [Source:HGNC Symbol;Acc:HGNC:4046]21351.3760.4248Yes
21IFI44Linterferon induced protein 44 like [Source:HGNC Symbol;Acc:HGNC:17817]21571.3690.4374Yes
22VPS37BVPS37B subunit of ESCRT-I [Source:HGNC Symbol;Acc:HGNC:25754]24611.1890.4406Yes
23ARID3BAT-rich interaction domain 3B [Source:HGNC Symbol;Acc:HGNC:14350]27241.0600.4436Yes
24KCNN4potassium calcium-activated channel subfamily N member 4 [Source:HGNC Symbol;Acc:HGNC:6293]34780.7750.4307No
25PPP2R1Aprotein phosphatase 2 scaffold subunit Aalpha [Source:HGNC Symbol;Acc:HGNC:9302]41170.5710.4189No
26ZFYVE26zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]43300.5140.4181No
27SLASrc like adaptor [Source:HGNC Symbol;Acc:HGNC:10902]43850.4990.4214No
28DOK3docking protein 3 [Source:HGNC Symbol;Acc:HGNC:24583]48550.3820.4124No
29MYH1myosin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:7567]54850.2220.3975No
30FOSFos proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:3796]57660.1490.3913No
31MAEAmacrophage erythroblast attacher, E3 ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:13731]57970.1410.3918No
32CEP41centrosomal protein 41 [Source:HGNC Symbol;Acc:HGNC:12370]61710.0530.3822No
33PTPRFprotein tyrosine phosphatase receptor type F [Source:HGNC Symbol;Acc:HGNC:9670]61760.0510.3826No
34IFI27interferon alpha inducible protein 27 [Source:HGNC Symbol;Acc:HGNC:5397]61930.0460.3826No
35FXYD6FXYD domain containing ion transport regulator 6 [Source:HGNC Symbol;Acc:HGNC:4030]67020.0000.3689No
36CRYABcrystallin alpha B [Source:HGNC Symbol;Acc:HGNC:2389]67180.0000.3685No
37PRDM14PR/SET domain 14 [Source:HGNC Symbol;Acc:HGNC:14001]70080.0000.3607No
38ANGPTL7angiopoietin like 7 [Source:HGNC Symbol;Acc:HGNC:24078]70280.0000.3601No
39AQP3aquaporin 3 (Gill blood group) [Source:HGNC Symbol;Acc:HGNC:636]71300.0000.3574No
40CNTNAP2contactin associated protein 2 [Source:HGNC Symbol;Acc:HGNC:13830]74500.0000.3488No
41PCDH8protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]82040.0000.3284No
42GPA33glycoprotein A33 [Source:HGNC Symbol;Acc:HGNC:4445]86210.0000.3171No
43OLFM4olfactomedin 4 [Source:HGNC Symbol;Acc:HGNC:17190]86390.0000.3167No
44OPRD1opioid receptor delta 1 [Source:HGNC Symbol;Acc:HGNC:8153]91510.0000.3029No
45GPX2glutathione peroxidase 2 [Source:HGNC Symbol;Acc:HGNC:4554]95280.0000.2927No
46KCNJ9potassium inwardly rectifying channel subfamily J member 9 [Source:HGNC Symbol;Acc:HGNC:6270]98950.0000.2828No
47GRB7growth factor receptor bound protein 7 [Source:HGNC Symbol;Acc:HGNC:4567]99240.0000.2820No
48GRM2glutamate metabotropic receptor 2 [Source:HGNC Symbol;Acc:HGNC:4594]100230.0000.2794No
49PTPRZ1protein tyrosine phosphatase receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]104870.0000.2668No
50RTP4receptor transporter protein 4 [Source:HGNC Symbol;Acc:HGNC:23992]105880.0000.2641No
51LCN1lipocalin 1 [Source:HGNC Symbol;Acc:HGNC:6525]110100.0000.2527No
52PROZprotein Z, vitamin K dependent plasma glycoprotein [Source:HGNC Symbol;Acc:HGNC:9460]116870.0000.2344No
53IGFBP6insulin like growth factor binding protein 6 [Source:HGNC Symbol;Acc:HGNC:5475]118930.0000.2289No
54GYPEglycophorin E (MNS blood group) [Source:HGNC Symbol;Acc:HGNC:4705]119660.0000.2269No
55AGRPagouti related neuropeptide [Source:HGNC Symbol;Acc:HGNC:330]122270.0000.2199No
56LGR5leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]122300.0000.2199No
57CNMDchondromodulin [Source:HGNC Symbol;Acc:HGNC:17005]124100.0000.2150No
58OR1D2olfactory receptor family 1 subfamily D member 2 [Source:HGNC Symbol;Acc:HGNC:8183]126250.0000.2092No
59ZBED2zinc finger BED-type containing 2 [Source:HGNC Symbol;Acc:HGNC:20710]131480.0000.1951No
60GCKRglucokinase regulator [Source:HGNC Symbol;Acc:HGNC:4196]132050.0000.1936No
61ESRP1epithelial splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25966]133920.0000.1885No
62FAM215Afamily with sequence similarity 215 member A [Source:HGNC Symbol;Acc:HGNC:17505]140960.0000.1695No
63P2RX2purinergic receptor P2X 2 [Source:HGNC Symbol;Acc:HGNC:15459]142220.0000.1661No
64EFNA2ephrin A2 [Source:HGNC Symbol;Acc:HGNC:3222]144120.0000.1610No
65PAX1paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]149340.0000.1469No
66TRIM17tripartite motif containing 17 [Source:HGNC Symbol;Acc:HGNC:13430]154730.0000.1324No
67SLC10A1solute carrier family 10 member 1 [Source:HGNC Symbol;Acc:HGNC:10905]156560.0000.1274No
68DIO2iodothyronine deiodinase 2 [Source:HGNC Symbol;Acc:HGNC:2884]158230.0000.1229No
69BCO1beta-carotene oxygenase 1 [Source:HGNC Symbol;Acc:HGNC:13815]158750.0000.1216No
70KAZNkazrin, periplakin interacting protein [Source:HGNC Symbol;Acc:HGNC:29173]173920.0000.0805No
71HPXhemopexin [Source:HGNC Symbol;Acc:HGNC:5171]174940.0000.0778No
72GPR45G protein-coupled receptor 45 [Source:HGNC Symbol;Acc:HGNC:4503]175420.0000.0765No
73SERPINF2serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]178110.0000.0693No
74SERPINI2serpin family I member 2 [Source:HGNC Symbol;Acc:HGNC:8945]178190.0000.0691No
75SEMA7Asemaphorin 7A (John Milton Hagen blood group) [Source:HGNC Symbol;Acc:HGNC:10741]178820.0000.0674No
76CEACAM7CEA cell adhesion molecule 7 [Source:HGNC Symbol;Acc:HGNC:1819]179350.0000.0660No
77CEACAM6CEA cell adhesion molecule 6 [Source:HGNC Symbol;Acc:HGNC:1818]179360.0000.0660No
78DNAJA4DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]185830.0000.0485No
79LPAlipoprotein(a) [Source:HGNC Symbol;Acc:HGNC:6667]187400.0000.0443No
80COL9A3collagen type IX alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2219]190540.0000.0358No
81DOC2Adouble C2 domain alpha [Source:HGNC Symbol;Acc:HGNC:2985]190600.0000.0357No
82MIR124-1HGMIR124-1 host gene [Source:HGNC Symbol;Acc:HGNC:27231]195190.0000.0233No
83RPL23AP7ribosomal protein L23a pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:17336]202020.0000.0048No
84FOXA1forkhead box A1 [Source:HGNC Symbol;Acc:HGNC:5021]207800.000-0.0108No
85DPEP1dipeptidase 1 [Source:HGNC Symbol;Acc:HGNC:3002]207960.000-0.0112No
86ATP2C2ATPase secretory pathway Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:29103]208470.000-0.0125No
87TCP10L3t-complex 10 like 3, pseudogene [Source:HGNC Symbol;Acc:HGNC:11656]209490.000-0.0153No
88MYL10myosin light chain 10 [Source:HGNC Symbol;Acc:HGNC:29825]210260.000-0.0173No
89CD300CCD300c molecule [Source:HGNC Symbol;Acc:HGNC:19320]210670.000-0.0184No
90EGFL6EGF like domain multiple 6 [Source:HGNC Symbol;Acc:HGNC:3235]210940.000-0.0191No
91DLGAP2DLG associated protein 2 [Source:HGNC Symbol;Acc:HGNC:2906]212070.000-0.0221No
92CLCA1chloride channel accessory 1 [Source:HGNC Symbol;Acc:HGNC:2015]217290.000-0.0362No
93THSD4thrombospondin type 1 domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25835]217840.000-0.0377No
94CST4cystatin S [Source:HGNC Symbol;Acc:HGNC:2476]218830.000-0.0403No
95CTF1cardiotrophin 1 [Source:HGNC Symbol;Acc:HGNC:2499]220850.000-0.0458No
96CTRCchymotrypsin C [Source:HGNC Symbol;Acc:HGNC:2523]222310.000-0.0497No
97TEX13Atestis expressed 13A [Source:HGNC Symbol;Acc:HGNC:11735]223350.000-0.0525No
98OR10J1olfactory receptor family 10 subfamily J member 1 [Source:HGNC Symbol;Acc:HGNC:8175]230810.000-0.0727No
99CASQ2calsequestrin 2 [Source:HGNC Symbol;Acc:HGNC:1513]241690.000-0.1021No
100ITIH2inter-alpha-trypsin inhibitor heavy chain 2 [Source:HGNC Symbol;Acc:HGNC:6167]243080.000-0.1058No
101ST8SIA3ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:14269]243820.000-0.1078No
102PYYpeptide YY [Source:HGNC Symbol;Acc:HGNC:9748]248860.000-0.1214No
103RHOrhodopsin [Source:HGNC Symbol;Acc:HGNC:10012]252990.000-0.1325No
104IFI6interferon alpha inducible protein 6 [Source:HGNC Symbol;Acc:HGNC:4054]254580.000-0.1368No
105PSORS1C1psoriasis susceptibility 1 candidate 1 [Source:HGNC Symbol;Acc:HGNC:17202]255210.000-0.1385No
106KIAA0408KIAA0408 [Source:HGNC Symbol;Acc:HGNC:21636]263450.000-0.1608No
107CMKLR1chemerin chemokine-like receptor 1 [Source:HGNC Symbol;Acc:HGNC:2121]274010.000-0.1893No
108CCR8C-C motif chemokine receptor 8 [Source:HGNC Symbol;Acc:HGNC:1609]280500.000-0.2069No
109UNC93B1unc-93 homolog B1, TLR signaling regulator [Source:HGNC Symbol;Acc:HGNC:13481]28551-0.052-0.2199No
110VAV2vav guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:12658]28877-0.142-0.2273No
111INPP5Dinositol polyphosphate-5-phosphatase D [Source:HGNC Symbol;Acc:HGNC:6079]29259-0.233-0.2354No
112GABRG2gamma-aminobutyric acid type A receptor subunit gamma2 [Source:HGNC Symbol;Acc:HGNC:4087]29303-0.243-0.2342No
113AP1G2adaptor related protein complex 1 subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:556]30016-0.327-0.2504No
114CHRM4cholinergic receptor muscarinic 4 [Source:HGNC Symbol;Acc:HGNC:1953]30187-0.370-0.2514No
115UTYubiquitously transcribed tetratricopeptide repeat containing, Y-linked [Source:HGNC Symbol;Acc:HGNC:12638]30271-0.386-0.2500No
116CCDC81coiled-coil domain containing 81 [Source:HGNC Symbol;Acc:HGNC:26281]30461-0.436-0.2509No
117USP46ubiquitin specific peptidase 46 [Source:HGNC Symbol;Acc:HGNC:20075]30962-0.579-0.2589No
118HSPA1Lheat shock protein family A (Hsp70) member 1 like [Source:HGNC Symbol;Acc:HGNC:5234]31275-0.659-0.2611No
119CICcapicua transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:14214]31602-0.766-0.2626No
120CIDEBcell death inducing DFFA like effector b [Source:HGNC Symbol;Acc:HGNC:1977]32074-0.901-0.2667No
121CAMK2Acalcium/calmodulin dependent protein kinase II alpha [Source:HGNC Symbol;Acc:HGNC:1460]32275-0.963-0.2629No
122LILRA6leukocyte immunoglobulin like receptor A6 [Source:HGNC Symbol;Acc:HGNC:15495]32529-1.026-0.2599No
123NAT2N-acetyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:7646]32881-1.158-0.2583No
124RBPJLrecombination signal binding protein for immunoglobulin kappa J region like [Source:HGNC Symbol;Acc:HGNC:13761]32947-1.183-0.2487No
125GSG1germ cell associated 1 [Source:HGNC Symbol;Acc:HGNC:19716]33435-1.360-0.2489No
126STUB1STIP1 homology and U-box containing protein 1 [Source:HGNC Symbol;Acc:HGNC:11427]33440-1.362-0.2360No
127NRDE2NRDE-2, necessary for RNA interference, domain containing [Source:HGNC Symbol;Acc:HGNC:20186]33686-1.467-0.2285No
128LDLRAD4low density lipoprotein receptor class A domain containing 4 [Source:HGNC Symbol;Acc:HGNC:1224]33836-1.539-0.2178No
129RXRGretinoid X receptor gamma [Source:HGNC Symbol;Acc:HGNC:10479]34247-1.740-0.2123No
130GPR162G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]34252-1.742-0.1957No
131TEDC2tubulin epsilon and delta complex 2 [Source:HGNC Symbol;Acc:HGNC:25849]34618-1.945-0.1869No
132PRELID3APRELI domain containing 3A [Source:HGNC Symbol;Acc:HGNC:24639]34708-1.945-0.1707No
133ABHD8abhydrolase domain containing 8 [Source:HGNC Symbol;Acc:HGNC:23759]35230-2.262-0.1632No
134PRPHperipherin [Source:HGNC Symbol;Acc:HGNC:9461]35451-2.404-0.1461No
135FGL2fibrinogen like 2 [Source:HGNC Symbol;Acc:HGNC:3696]35843-2.733-0.1305No
136KCNC3potassium voltage-gated channel subfamily C member 3 [Source:HGNC Symbol;Acc:HGNC:6235]36358-3.270-0.1131No
137NDRG2NDRG family member 2 [Source:HGNC Symbol;Acc:HGNC:14460]36950-4.386-0.0871No
138HDAC9histone deacetylase 9 [Source:HGNC Symbol;Acc:HGNC:14065]37025-4.689-0.0442No
139TTC38tetratricopeptide repeat domain 38 [Source:HGNC Symbol;Acc:HGNC:26082]37051-4.7980.0011No
Table: GSEA details [plain text format]



Fig 2: ALK_DN.V1_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ALK_DN.V1_DN: Random ES distribution   
Gene set null distribution of ES for ALK_DN.V1_DN