Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetBMI1_DN.V1_UP
Enrichment Score (ES)0.4820306
Normalized Enrichment Score (NES)1.247087
Nominal p-value0.04761905
FDR q-value0.1625697
FWER p-Value0.678
Table: GSEA Results Summary



Fig 1: Enrichment plot: BMI1_DN.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1VEGFCvascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]134.9640.0291Yes
2LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]334.8830.0575Yes
3PMEPA1prostate transmembrane protein, androgen induced 1 [Source:HGNC Symbol;Acc:HGNC:14107]774.6020.0837Yes
4C3AR1complement C3a receptor 1 [Source:HGNC Symbol;Acc:HGNC:1319]1204.3560.1084Yes
5ABCA1ATP binding cassette subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:29]1314.3070.1336Yes
6FURINfurin, paired basic amino acid cleaving enzyme [Source:HGNC Symbol;Acc:HGNC:8568]1364.2830.1589Yes
7TLCD3ATLC domain containing 3A [Source:HGNC Symbol;Acc:HGNC:29646]1714.0590.1821Yes
8EDN1endothelin 1 [Source:HGNC Symbol;Acc:HGNC:3176]1734.0540.2061Yes
9ITGA5integrin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6141]2153.8650.2279Yes
10ACTA2actin alpha 2, smooth muscle [Source:HGNC Symbol;Acc:HGNC:130]3033.4720.2461Yes
11FAPfibroblast activation protein alpha [Source:HGNC Symbol;Acc:HGNC:3590]4253.1580.2616Yes
12ANPEPalanyl aminopeptidase, membrane [Source:HGNC Symbol;Acc:HGNC:500]5102.9910.2771Yes
13CHST11carbohydrate sulfotransferase 11 [Source:HGNC Symbol;Acc:HGNC:17422]5112.9850.2948Yes
14TAGLNtransgelin [Source:HGNC Symbol;Acc:HGNC:11553]5932.7900.3091Yes
15FZD5frizzled class receptor 5 [Source:HGNC Symbol;Acc:HGNC:4043]6582.7190.3235Yes
16CRISPLD2cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]7052.6290.3378Yes
17CSF1colony stimulating factor 1 [Source:HGNC Symbol;Acc:HGNC:2432]7132.6110.3531Yes
18PIEZO1piezo type mechanosensitive ion channel component 1 [Source:HGNC Symbol;Acc:HGNC:28993]7162.6090.3686Yes
19SLC7A5solute carrier family 7 member 5 [Source:HGNC Symbol;Acc:HGNC:11063]10392.1460.3726Yes
20AGRNagrin [Source:HGNC Symbol;Acc:HGNC:329]12271.9260.3789Yes
21SLC19A1solute carrier family 19 member 1 [Source:HGNC Symbol;Acc:HGNC:10937]13401.8310.3868Yes
22NRP2neuropilin 2 [Source:HGNC Symbol;Acc:HGNC:8005]13431.8250.3975Yes
23SLC1A5solute carrier family 1 member 5 [Source:HGNC Symbol;Acc:HGNC:10943]14261.7350.4056Yes
24SLC2A1solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]14641.7100.4147Yes
25TAP1transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]15151.6720.4233Yes
26FKRPfukutin related protein [Source:HGNC Symbol;Acc:HGNC:17997]16941.5400.4276Yes
27FLNBfilamin B [Source:HGNC Symbol;Acc:HGNC:3755]17171.5250.4361Yes
28DHRS3dehydrogenase/reductase 3 [Source:HGNC Symbol;Acc:HGNC:17693]17861.4840.4430Yes
29STC2stanniocalcin 2 [Source:HGNC Symbol;Acc:HGNC:11374]18781.4380.4491Yes
30GPRC5AG protein-coupled receptor class C group 5 member A [Source:HGNC Symbol;Acc:HGNC:9836]19301.4040.4561Yes
31FGFR1fibroblast growth factor receptor 1 [Source:HGNC Symbol;Acc:HGNC:3688]21821.3530.4573Yes
32B4GALNT1beta-1,4-N-acetyl-galactosaminyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:4117]21971.3430.4649Yes
33LCP1lymphocyte cytosolic protein 1 [Source:HGNC Symbol;Acc:HGNC:6528]22321.3230.4718Yes
34SLC1A4solute carrier family 1 member 4 [Source:HGNC Symbol;Acc:HGNC:10942]23881.2220.4748Yes
35F3coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]26821.0740.4733Yes
36HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]28131.0180.4758Yes
37PODXLpodocalyxin like [Source:HGNC Symbol;Acc:HGNC:9171]30260.9310.4756Yes
38FJX1four-jointed box kinase 1 [Source:HGNC Symbol;Acc:HGNC:17166]32070.8650.4758Yes
39TGFB2transforming growth factor beta 2 [Source:HGNC Symbol;Acc:HGNC:11768]32230.8590.4805Yes
40TNFRSF8TNF receptor superfamily member 8 [Source:HGNC Symbol;Acc:HGNC:11923]34330.7900.4796Yes
41CD82CD82 molecule [Source:HGNC Symbol;Acc:HGNC:6210]35340.7550.4813Yes
42MFGE8milk fat globule EGF and factor V/VIII domain containing [Source:HGNC Symbol;Acc:HGNC:7036]36940.6900.4811Yes
43CSPG5chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]39350.6310.4784Yes
44GFPT2glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]39780.6150.4809Yes
45TMEM62transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]40650.5870.4820Yes
46SLC52A2solute carrier family 52 member 2 [Source:HGNC Symbol;Acc:HGNC:30224]44670.4790.4740No
47INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]46230.4360.4724No
48SLC2A6solute carrier family 2 member 6 [Source:HGNC Symbol;Acc:HGNC:11011]49880.3430.4646No
49SLC5A6solute carrier family 5 member 6 [Source:HGNC Symbol;Acc:HGNC:11041]50240.3340.4656No
50ATF6activating transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:791]55270.2120.4533No
51LAMB3laminin subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:6490]56570.1750.4508No
52CSPG4chondroitin sulfate proteoglycan 4 [Source:HGNC Symbol;Acc:HGNC:2466]60570.0820.4405No
53CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]64440.0000.4301No
54FGF21fibroblast growth factor 21 [Source:HGNC Symbol;Acc:HGNC:3678]69610.0000.4161No
55VANGL1VANGL planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:15512]81130.0000.3850No
56GREM1gremlin 1, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:2001]83350.0000.3790No
57PROP1PROP paired-like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9455]84330.0000.3764No
58HOXB1homeobox B1 [Source:HGNC Symbol;Acc:HGNC:5111]89320.0000.3629No
59TNFSF9TNF superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11939]89670.0000.3620No
60VLDLRvery low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:12698]95840.0000.3453No
61TNFRSF9TNF receptor superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11924]98550.0000.3380No
62PLATplasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]99760.0000.3347No
63ADAM12ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]99890.0000.3344No
64ACKR3atypical chemokine receptor 3 [Source:HGNC Symbol;Acc:HGNC:23692]111740.0000.3024No
65LRRC15leucine rich repeat containing 15 [Source:HGNC Symbol;Acc:HGNC:20818]114950.0000.2937No
66PTHLHparathyroid hormone like hormone [Source:HGNC Symbol;Acc:HGNC:9607]117400.0000.2871No
67PSG5pregnancy specific beta-1-glycoprotein 5 [Source:HGNC Symbol;Acc:HGNC:9522]119560.0000.2813No
68IGKCimmunoglobulin kappa constant [Source:HGNC Symbol;Acc:HGNC:5716]125470.0000.2653No
69TEKTEK receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11724]126310.0000.2631No
70VNN1vanin 1 [Source:HGNC Symbol;Acc:HGNC:12705]127910.0000.2587No
71TIE1tyrosine kinase with immunoglobulin like and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:11809]131160.0000.2500No
72IL7Rinterleukin 7 receptor [Source:HGNC Symbol;Acc:HGNC:6024]139710.0000.2269No
73LRIG1leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]152910.0000.1912No
74COL13A1collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]155270.0000.1848No
75DKK1dickkopf WNT signaling pathway inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:2891]163660.0000.1621No
76COL16A1collagen type XVI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2193]164870.0000.1589No
77GALgalanin and GMAP prepropeptide [Source:HGNC Symbol;Acc:HGNC:4114]169210.0000.1471No
78TIMP3TIMP metallopeptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:11822]171580.0000.1408No
79CDCP1CUB domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:24357]173130.0000.1366No
80GABREgamma-aminobutyric acid type A receptor subunit epsilon [Source:HGNC Symbol;Acc:HGNC:4085]173340.0000.1361No
81HAPLN1hyaluronan and proteoglycan link protein 1 [Source:HGNC Symbol;Acc:HGNC:2380]174430.0000.1331No
82SRPX2sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]175460.0000.1304No
83MICAMHC class I polypeptide-related sequence A [Source:HGNC Symbol;Acc:HGNC:7090]177120.0000.1259No
84MICBMHC class I polypeptide-related sequence B [Source:HGNC Symbol;Acc:HGNC:7091]177130.0000.1259No
85SEMA3Gsemaphorin 3G [Source:HGNC Symbol;Acc:HGNC:30400]179060.0000.1207No
86PAPPApappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]179180.0000.1204No
87BDKRB2bradykinin receptor B2 [Source:HGNC Symbol;Acc:HGNC:1030]180080.0000.1180No
88BMP5bone morphogenetic protein 5 [Source:HGNC Symbol;Acc:HGNC:1072]191450.0000.0872No
89BMP4bone morphogenetic protein 4 [Source:HGNC Symbol;Acc:HGNC:1071]191470.0000.0872No
90MMP7matrix metallopeptidase 7 [Source:HGNC Symbol;Acc:HGNC:7174]191720.0000.0866No
91MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]191790.0000.0864No
92CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]195370.0000.0767No
93TCIMtranscriptional and immune response regulator [Source:HGNC Symbol;Acc:HGNC:1357]199460.0000.0657No
94FOXP3forkhead box P3 [Source:HGNC Symbol;Acc:HGNC:6106]205780.0000.0486No
95CPA4carboxypeptidase A4 [Source:HGNC Symbol;Acc:HGNC:15740]206050.0000.0479No
96CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]216660.0000.0192No
97NT5E5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021]218860.0000.0133No
98LSAMPlimbic system associated membrane protein [Source:HGNC Symbol;Acc:HGNC:6705]218910.0000.0132No
99CLDN1claudin 1 [Source:HGNC Symbol;Acc:HGNC:2032]220250.0000.0096No
100HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]220970.0000.0077No
101MFAP5microfibril associated protein 5 [Source:HGNC Symbol;Acc:HGNC:29673]228070.000-0.0115No
102PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]228930.000-0.0138No
103ITGB8integrin subunit beta 8 [Source:HGNC Symbol;Acc:HGNC:6163]237830.000-0.0379No
104ITGB6integrin subunit beta 6 [Source:HGNC Symbol;Acc:HGNC:6161]237860.000-0.0379No
105ITGA3integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]237890.000-0.0380No
106SLCO2A1solute carrier organic anion transporter family member 2A1 [Source:HGNC Symbol;Acc:HGNC:10955]239730.000-0.0429No
107INHBEinhibin subunit beta E [Source:HGNC Symbol;Acc:HGNC:24029]251050.000-0.0736No
108MMP15matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]256670.000-0.0887No
109TNFAIP6TNF alpha induced protein 6 [Source:HGNC Symbol;Acc:HGNC:11898]257840.000-0.0919No
110KRT17keratin 17 [Source:HGNC Symbol;Acc:HGNC:6427]269700.000-0.1240No
111CCN3cellular communication network factor 3 [Source:HGNC Symbol;Acc:HGNC:7885]279890.000-0.1515No
112KMT2Alysine methyltransferase 2A [Source:HGNC Symbol;Acc:HGNC:7132]28852-0.136-0.1740No
113LHFPL2LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]29566-0.314-0.1915No
114COL7A1collagen type VII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2214]29818-0.320-0.1964No
115GDF5growth differentiation factor 5 [Source:HGNC Symbol;Acc:HGNC:4220]30022-0.329-0.1999No
116ASPHaspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757]30477-0.441-0.2096No
117FESFES proto-oncogene, tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3657]30602-0.475-0.2101No
118ADGRE5adhesion G protein-coupled receptor E5 [Source:HGNC Symbol;Acc:HGNC:1711]30835-0.538-0.2132No
119CTNScystinosin, lysosomal cystine transporter [Source:HGNC Symbol;Acc:HGNC:2518]30953-0.575-0.2130No
120POMT2protein O-mannosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:19743]31252-0.653-0.2172No
121CTSScathepsin S [Source:HGNC Symbol;Acc:HGNC:2545]31600-0.765-0.2220No
122STX1Asyntaxin 1A [Source:HGNC Symbol;Acc:HGNC:11433]32144-0.920-0.2312No
123ANXA3annexin A3 [Source:HGNC Symbol;Acc:HGNC:541]32228-0.946-0.2279No
124SLC29A2solute carrier family 29 member 2 [Source:HGNC Symbol;Acc:HGNC:11004]32390-0.998-0.2263No
125CCND1cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]32469-1.023-0.2224No
126TRIOtrio Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:12303]32794-1.127-0.2244No
127LRP5LDL receptor related protein 5 [Source:HGNC Symbol;Acc:HGNC:6697]33223-1.296-0.2283No
128PANX1pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]33383-1.334-0.2247No
129SIRPAsignal regulatory protein alpha [Source:HGNC Symbol;Acc:HGNC:9662]34477-1.874-0.2432No
130C2CD2LC2CD2 like [Source:HGNC Symbol;Acc:HGNC:29000]34802-1.981-0.2402No
131KCNC4potassium voltage-gated channel subfamily C member 4 [Source:HGNC Symbol;Acc:HGNC:6236]34977-2.090-0.2325No
132P3H3prolyl 3-hydroxylase 3 [Source:HGNC Symbol;Acc:HGNC:19318]35405-2.381-0.2300No
133SLCO4A1solute carrier organic anion transporter family member 4A1 [Source:HGNC Symbol;Acc:HGNC:10953]35569-2.497-0.2196No
134EPHA2EPH receptor A2 [Source:HGNC Symbol;Acc:HGNC:3386]35685-2.601-0.2073No
135BST1bone marrow stromal cell antigen 1 [Source:HGNC Symbol;Acc:HGNC:1118]35916-2.751-0.1972No
136SLC29A1solute carrier family 29 member 1 (Augustine blood group) [Source:HGNC Symbol;Acc:HGNC:11003]36045-2.930-0.1833No
137TMEM51transmembrane protein 51 [Source:HGNC Symbol;Acc:HGNC:25488]36194-3.091-0.1689No
138ATP13A2ATPase cation transporting 13A2 [Source:HGNC Symbol;Acc:HGNC:30213]36243-3.142-0.1516No
139JAG1jagged canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:6188]36261-3.182-0.1332No
140FADS3fatty acid desaturase 3 [Source:HGNC Symbol;Acc:HGNC:3576]36470-3.446-0.1184No
141LTBP4latent transforming growth factor beta binding protein 4 [Source:HGNC Symbol;Acc:HGNC:6717]36473-3.448-0.0980No
142CHST3carbohydrate sulfotransferase 3 [Source:HGNC Symbol;Acc:HGNC:1971]36587-3.621-0.0796No
143CLSPNclaspin [Source:HGNC Symbol;Acc:HGNC:19715]36591-3.626-0.0582No
144ITGA4integrin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6140]36705-3.833-0.0385No
145PLXNA2plexin A2 [Source:HGNC Symbol;Acc:HGNC:9100]36759-3.923-0.0166No
146ADRB2adrenoceptor beta 2 [Source:HGNC Symbol;Acc:HGNC:286]36932-4.3140.0043No
Table: GSEA details [plain text format]



Fig 2: BMI1_DN.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: BMI1_DN.V1_UP: Random ES distribution   
Gene set null distribution of ES for BMI1_DN.V1_UP