Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetBMI1_DN_MEL18_DN.V1_UP
Enrichment Score (ES)0.52849776
Normalized Enrichment Score (NES)1.3936197
Nominal p-value0.0
FDR q-value0.14254597
FWER p-Value0.259
Table: GSEA Results Summary



Fig 1: Enrichment plot: BMI1_DN_MEL18_DN.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1VEGFCvascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]134.9640.0277Yes
2IL1Ainterleukin 1 alpha [Source:HGNC Symbol;Acc:HGNC:5991]154.9570.0557Yes
3LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]334.8830.0828Yes
4FOSL1FOS like 1, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:13718]654.6600.1083Yes
5PMEPA1prostate transmembrane protein, androgen induced 1 [Source:HGNC Symbol;Acc:HGNC:14107]774.6020.1340Yes
6C3AR1complement C3a receptor 1 [Source:HGNC Symbol;Acc:HGNC:1319]1204.3560.1575Yes
7TFECtranscription factor EC [Source:HGNC Symbol;Acc:HGNC:11754]1234.3380.1820Yes
8ABCA1ATP binding cassette subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:29]1314.3070.2061Yes
9ZC3H12Azinc finger CCCH-type containing 12A [Source:HGNC Symbol;Acc:HGNC:26259]1624.1090.2285Yes
10EDN1endothelin 1 [Source:HGNC Symbol;Acc:HGNC:3176]1734.0540.2512Yes
11SLC7A11solute carrier family 7 member 11 [Source:HGNC Symbol;Acc:HGNC:11059]1983.9200.2727Yes
12ITGA5integrin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6141]2153.8650.2941Yes
13GADD45Agrowth arrest and DNA damage inducible alpha [Source:HGNC Symbol;Acc:HGNC:4095]2963.5000.3117Yes
14FAPfibroblast activation protein alpha [Source:HGNC Symbol;Acc:HGNC:3590]4253.1580.3261Yes
15PIM1Pim-1 proto-oncogene, serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:8986]4993.0200.3412Yes
16CHST11carbohydrate sulfotransferase 11 [Source:HGNC Symbol;Acc:HGNC:17422]5112.9850.3578Yes
17EHD1EH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:3242]5812.8180.3718Yes
18TAGLNtransgelin [Source:HGNC Symbol;Acc:HGNC:11553]5932.7900.3873Yes
19CRISPLD2cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]7052.6290.3991Yes
20CSF1colony stimulating factor 1 [Source:HGNC Symbol;Acc:HGNC:2432]7132.6110.4137Yes
21PIEZO1piezo type mechanosensitive ion channel component 1 [Source:HGNC Symbol;Acc:HGNC:28993]7162.6090.4284Yes
22ATF3activating transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:785]7762.5080.4410Yes
23SLC7A5solute carrier family 7 member 5 [Source:HGNC Symbol;Acc:HGNC:11063]10392.1460.4460Yes
24TRIB3tribbles pseudokinase 3 [Source:HGNC Symbol;Acc:HGNC:16228]12201.9340.4521Yes
25RUSC2RUN and SH3 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23625]12231.9320.4629Yes
26SLC19A1solute carrier family 19 member 1 [Source:HGNC Symbol;Acc:HGNC:10937]13401.8310.4701Yes
27NRP2neuropilin 2 [Source:HGNC Symbol;Acc:HGNC:8005]13431.8250.4804Yes
28NKAIN1sodium/potassium transporting ATPase interacting 1 [Source:HGNC Symbol;Acc:HGNC:25743]14561.7220.4871Yes
29C2CD2C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]18051.4740.4860Yes
30STC2stanniocalcin 2 [Source:HGNC Symbol;Acc:HGNC:11374]18781.4380.4922Yes
31LCP1lymphocyte cytosolic protein 1 [Source:HGNC Symbol;Acc:HGNC:6528]22321.3230.4901Yes
32CDC42EP2CDC42 effector protein 2 [Source:HGNC Symbol;Acc:HGNC:16263]22561.3070.4969Yes
33SLC1A4solute carrier family 1 member 4 [Source:HGNC Symbol;Acc:HGNC:10942]23881.2220.5002Yes
34TNIP3TNFAIP3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:19315]25221.1530.5032Yes
35F3coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]26821.0740.5049Yes
36HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]28131.0180.5072Yes
37APBB2amyloid beta precursor protein binding family B member 2 [Source:HGNC Symbol;Acc:HGNC:582]28570.9960.5116Yes
38PODXLpodocalyxin like [Source:HGNC Symbol;Acc:HGNC:9171]30260.9310.5123Yes
39FJX1four-jointed box kinase 1 [Source:HGNC Symbol;Acc:HGNC:17166]32070.8650.5124Yes
40MICALL1MICAL like 1 [Source:HGNC Symbol;Acc:HGNC:29804]32170.8600.5170Yes
41TGFB2transforming growth factor beta 2 [Source:HGNC Symbol;Acc:HGNC:11768]32230.8590.5217Yes
42ZEB2zinc finger E-box binding homeobox 2 [Source:HGNC Symbol;Acc:HGNC:14881]32730.8450.5251Yes
43TNFRSF8TNF receptor superfamily member 8 [Source:HGNC Symbol;Acc:HGNC:11923]34330.7900.5253Yes
44KCNN4potassium calcium-activated channel subfamily N member 4 [Source:HGNC Symbol;Acc:HGNC:6293]34780.7750.5285Yes
45SLC22A4solute carrier family 22 member 4 [Source:HGNC Symbol;Acc:HGNC:10968]38160.6700.5232No
46GFPT2glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]39780.6150.5223No
47PIK3CGphosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma [Source:HGNC Symbol;Acc:HGNC:8978]40010.6080.5251No
48RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]41590.5590.5240No
49ARL4AADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]42320.5360.5251No
50INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]46230.4360.5170No
51ARNTL2aryl hydrocarbon receptor nuclear translocator like 2 [Source:HGNC Symbol;Acc:HGNC:18984]47200.4090.5167No
52DUSP10dual specificity phosphatase 10 [Source:HGNC Symbol;Acc:HGNC:3065]47530.4000.5181No
53BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]50090.3360.5131No
54LAMB3laminin subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:6490]56570.1750.4966No
55VEGFAvascular endothelial growth factor A [Source:HGNC Symbol;Acc:HGNC:12680]60320.0900.4870No
56TUFT1tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]60330.0900.4875No
57CSPG4chondroitin sulfate proteoglycan 4 [Source:HGNC Symbol;Acc:HGNC:2466]60570.0820.4873No
58FGF21fibroblast growth factor 21 [Source:HGNC Symbol;Acc:HGNC:3678]69610.0000.4629No
59ABLIM3actin binding LIM protein family member 3 [Source:HGNC Symbol;Acc:HGNC:29132]71110.0000.4589No
60GREM1gremlin 1, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:2001]83350.0000.4258No
61TNFSF9TNF superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11939]89670.0000.4087No
62MAP3K7CLMAP3K7 C-terminal like [Source:HGNC Symbol;Acc:HGNC:16457]93240.0000.3990No
63VLDLRvery low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:12698]95840.0000.3920No
64TNFRSF9TNF receptor superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11924]98550.0000.3847No
65PLATplasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]99760.0000.3815No
66ADAM19ADAM metallopeptidase domain 19 [Source:HGNC Symbol;Acc:HGNC:197]99870.0000.3812No
67ADAM12ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]99890.0000.3812No
68ADM2adrenomedullin 2 [Source:HGNC Symbol;Acc:HGNC:28898]112220.0000.3478No
69LRRC15leucine rich repeat containing 15 [Source:HGNC Symbol;Acc:HGNC:20818]114950.0000.3405No
70PTHLHparathyroid hormone like hormone [Source:HGNC Symbol;Acc:HGNC:9607]117400.0000.3339No
71MT1Fmetallothionein 1F [Source:HGNC Symbol;Acc:HGNC:7398]124920.0000.3135No
72TEKTEK receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11724]126310.0000.3098No
73VNN1vanin 1 [Source:HGNC Symbol;Acc:HGNC:12705]127910.0000.3055No
74TACR3tachykinin receptor 3 [Source:HGNC Symbol;Acc:HGNC:11528]132650.0000.2927No
75IL7Rinterleukin 7 receptor [Source:HGNC Symbol;Acc:HGNC:6024]139710.0000.2736No
76P2RX5purinergic receptor P2X 5 [Source:HGNC Symbol;Acc:HGNC:8536]142180.0000.2670No
77COL13A1collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]155270.0000.2316No
78HTR1D5-hydroxytryptamine receptor 1D [Source:HGNC Symbol;Acc:HGNC:5289]155850.0000.2300No
79COL16A1collagen type XVI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2193]164870.0000.2056No
80GALgalanin and GMAP prepropeptide [Source:HGNC Symbol;Acc:HGNC:4114]169210.0000.1939No
81TIMP3TIMP metallopeptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:11822]171580.0000.1875No
82MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]171720.0000.1872No
83FAM189A1family with sequence similarity 189 member A1 [Source:HGNC Symbol;Acc:HGNC:29075]173480.0000.1824No
84HAPLN1hyaluronan and proteoglycan link protein 1 [Source:HGNC Symbol;Acc:HGNC:2380]174430.0000.1799No
85MICAMHC class I polypeptide-related sequence A [Source:HGNC Symbol;Acc:HGNC:7090]177120.0000.1726No
86PAPPApappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]179180.0000.1671No
87CDH13cadherin 13 [Source:HGNC Symbol;Acc:HGNC:1753]187900.0000.1435No
88BMP5bone morphogenetic protein 5 [Source:HGNC Symbol;Acc:HGNC:1072]191450.0000.1339No
89MMP7matrix metallopeptidase 7 [Source:HGNC Symbol;Acc:HGNC:7174]191720.0000.1332No
90CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]195280.0000.1236No
91CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]195370.0000.1234No
92TCIMtranscriptional and immune response regulator [Source:HGNC Symbol;Acc:HGNC:1357]199460.0000.1124No
93CPA4carboxypeptidase A4 [Source:HGNC Symbol;Acc:HGNC:15740]206050.0000.0946No
94NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]207840.0000.0897No
95CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]216660.0000.0659No
96NT5E5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021]218860.0000.0600No
97LSAMPlimbic system associated membrane protein [Source:HGNC Symbol;Acc:HGNC:6705]218910.0000.0599No
98WNT5BWnt family member 5B [Source:HGNC Symbol;Acc:HGNC:16265]219150.0000.0592No
99CLDN1claudin 1 [Source:HGNC Symbol;Acc:HGNC:2032]220250.0000.0563No
100HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]220970.0000.0544No
101PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]228930.0000.0328No
102PLAURplasminogen activator, urokinase receptor [Source:HGNC Symbol;Acc:HGNC:9053]229980.0000.0300No
103ITGB8integrin subunit beta 8 [Source:HGNC Symbol;Acc:HGNC:6163]237830.0000.0088No
104ITGB6integrin subunit beta 6 [Source:HGNC Symbol;Acc:HGNC:6161]237860.0000.0088No
105ITGA3integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]237890.0000.0087No
106PAGE1PAGE family member 1 [Source:HGNC Symbol;Acc:HGNC:4107]238800.0000.0063No
107SCML2Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]250570.000-0.0256No
108INHBEinhibin subunit beta E [Source:HGNC Symbol;Acc:HGNC:24029]251050.000-0.0268No
109TNFAIP6TNF alpha induced protein 6 [Source:HGNC Symbol;Acc:HGNC:11898]257840.000-0.0452No
110KRT75keratin 75 [Source:HGNC Symbol;Acc:HGNC:24431]269910.000-0.0778No
111GAB2GRB2 associated binding protein 2 [Source:HGNC Symbol;Acc:HGNC:14458]28726-0.102-0.1242No
112KMT2Alysine methyltransferase 2A [Source:HGNC Symbol;Acc:HGNC:7132]28852-0.136-0.1268No
113ZNF639zinc finger protein 639 [Source:HGNC Symbol;Acc:HGNC:30950]28884-0.144-0.1268No
114PSAT1phosphoserine aminotransferase 1 [Source:HGNC Symbol;Acc:HGNC:19129]29207-0.222-0.1343No
115LHFPL2LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]29566-0.314-0.1422No
116COL7A1collagen type VII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2214]29818-0.320-0.1472No
117GDF5growth differentiation factor 5 [Source:HGNC Symbol;Acc:HGNC:4220]30022-0.329-0.1508No
118KLF7Kruppel like factor 7 [Source:HGNC Symbol;Acc:HGNC:6350]30360-0.408-0.1576No
119ASPHaspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757]30477-0.441-0.1583No
120KCNN3potassium calcium-activated channel subfamily N member 3 [Source:HGNC Symbol;Acc:HGNC:6292]30613-0.478-0.1592No
121ADGRE5adhesion G protein-coupled receptor E5 [Source:HGNC Symbol;Acc:HGNC:1711]30835-0.538-0.1622No
122SLC6A9solute carrier family 6 member 9 [Source:HGNC Symbol;Acc:HGNC:11056]31597-0.764-0.1784No
123STX1Asyntaxin 1A [Source:HGNC Symbol;Acc:HGNC:11433]32144-0.920-0.1880No
124ANXA3annexin A3 [Source:HGNC Symbol;Acc:HGNC:541]32228-0.946-0.1849No
125CCND1cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]32469-1.023-0.1856No
126TRIOtrio Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:12303]32794-1.127-0.1880No
127KIF21Bkinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]33220-1.295-0.1922No
128ADGBandroglobin [Source:HGNC Symbol;Acc:HGNC:21212]33328-1.304-0.1877No
129ARL4CADP ribosylation factor like GTPase 4C [Source:HGNC Symbol;Acc:HGNC:698]34186-1.713-0.2013No
130C2CD2LC2CD2 like [Source:HGNC Symbol;Acc:HGNC:29000]34802-1.981-0.2067No
131PLEKHO1pleckstrin homology domain containing O1 [Source:HGNC Symbol;Acc:HGNC:24310]35793-2.694-0.2183No
132BST1bone marrow stromal cell antigen 1 [Source:HGNC Symbol;Acc:HGNC:1118]35916-2.751-0.2060No
133OGFRL1opioid growth factor receptor like 1 [Source:HGNC Symbol;Acc:HGNC:21378]36122-2.999-0.1946No
134ADMadrenomedullin [Source:HGNC Symbol;Acc:HGNC:259]36193-3.089-0.1791No
135TMEM51transmembrane protein 51 [Source:HGNC Symbol;Acc:HGNC:25488]36194-3.091-0.1616No
136ATP13A2ATPase cation transporting 13A2 [Source:HGNC Symbol;Acc:HGNC:30213]36243-3.142-0.1451No
137JAG1jagged canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:6188]36261-3.182-0.1276No
138WEE1WEE1 G2 checkpoint kinase [Source:HGNC Symbol;Acc:HGNC:12761]36392-3.338-0.1123No
139NAV2neuron navigator 2 [Source:HGNC Symbol;Acc:HGNC:15997]36468-3.443-0.0949No
140FADS3fatty acid desaturase 3 [Source:HGNC Symbol;Acc:HGNC:3576]36470-3.446-0.0754No
141CHST3carbohydrate sulfotransferase 3 [Source:HGNC Symbol;Acc:HGNC:1971]36587-3.621-0.0581No
142ITGA4integrin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6140]36705-3.833-0.0396No
143ADRB2adrenoceptor beta 2 [Source:HGNC Symbol;Acc:HGNC:286]36932-4.314-0.0213No
144SIK1salt inducible kinase 1 [Source:HGNC Symbol;Acc:HGNC:11142]36991-4.5250.0027No
Table: GSEA details [plain text format]



Fig 2: BMI1_DN_MEL18_DN.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: BMI1_DN_MEL18_DN.V1_UP: Random ES distribution   
Gene set null distribution of ES for BMI1_DN_MEL18_DN.V1_UP