Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetKRAS.KIDNEY_UP.V1_UP
Enrichment Score (ES)-0.6238049
Normalized Enrichment Score (NES)-1.38489
Nominal p-value0.0107015455
FDR q-value0.13834958
FWER p-Value0.669
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.KIDNEY_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CCND2cyclin D2 [Source:HGNC Symbol;Acc:HGNC:1583]4073.1970.0289No
2PLCL1phospholipase C like 1 (inactive) [Source:HGNC Symbol;Acc:HGNC:9063]7492.5480.0515No
3CPceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]7772.5070.0821No
4NMNAT2nicotinamide nucleotide adenylyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:16789]11821.9680.0958No
5SERPINI1serpin family I member 1 [Source:HGNC Symbol;Acc:HGNC:8943]15561.6460.1062No
6NRCAMneuronal cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:7994]21731.3580.1065No
7CRTAMcytotoxic and regulatory T cell molecule [Source:HGNC Symbol;Acc:HGNC:24313]22661.2980.1202No
8DDX6DEAD-box helicase 6 [Source:HGNC Symbol;Acc:HGNC:2747]26451.0900.1236No
9RNLSrenalase, FAD dependent amine oxidase [Source:HGNC Symbol;Acc:HGNC:25641]31720.8790.1204No
10DNM3dynamin 3 [Source:HGNC Symbol;Acc:HGNC:29125]40940.5780.1027No
11ETV1ETS variant transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3490]47230.4090.0908No
12SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]65960.0000.0401No
13SCG3secretogranin III [Source:HGNC Symbol;Acc:HGNC:13707]65980.0000.0401No
14WSCD1WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]66150.0000.0397No
15CRYABcrystallin alpha B [Source:HGNC Symbol;Acc:HGNC:2389]67180.0000.0369No
16DYNC1I1dynein cytoplasmic 1 intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:2963]69370.0000.0310No
17AQP4aquaporin 4 [Source:HGNC Symbol;Acc:HGNC:637]71270.0000.0259No
18NRXN1neurexin 1 [Source:HGNC Symbol;Acc:HGNC:8008]72560.0000.0224No
19HPCAL4hippocalcin like 4 [Source:HGNC Symbol;Acc:HGNC:18212]73090.0000.0210No
20HEY1hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]73670.0000.0195No
21ASPAaspartoacylase [Source:HGNC Symbol;Acc:HGNC:756]78650.0000.0060No
22MPZL2myelin protein zero like 2 [Source:HGNC Symbol;Acc:HGNC:3496]79750.0000.0031No
23EPB41L3erythrocyte membrane protein band 4.1 like 3 [Source:HGNC Symbol;Acc:HGNC:3380]81030.000-0.0003No
24PCDH9protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]82030.000-0.0030No
25PELI2pellino E3 ubiquitin protein ligase family member 2 [Source:HGNC Symbol;Acc:HGNC:8828]86170.000-0.0142No
26CALB1calbindin 1 [Source:HGNC Symbol;Acc:HGNC:1434]88780.000-0.0212No
27SMR3Asubmaxillary gland androgen regulated protein 3A [Source:HGNC Symbol;Acc:HGNC:19216]90010.000-0.0245No
28PLSCR4phospholipid scramblase 4 [Source:HGNC Symbol;Acc:HGNC:16497]93090.000-0.0328No
29GRIA2glutamate ionotropic receptor AMPA type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4572]93380.000-0.0336No
30CDR1cerebellar degeneration related protein 1 [Source:HGNC Symbol;Acc:HGNC:1798]95710.000-0.0399No
31NEBLnebulette [Source:HGNC Symbol;Acc:HGNC:16932]97160.000-0.0438No
32NEFLneurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]97330.000-0.0442No
33KCNA5potassium voltage-gated channel subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:6224]97660.000-0.0451No
34KCNJ8potassium inwardly rectifying channel subfamily J member 8 [Source:HGNC Symbol;Acc:HGNC:6269]98940.000-0.0485No
35LIMCH1LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]99110.000-0.0490No
36GRM5glutamate metabotropic receptor 5 [Source:HGNC Symbol;Acc:HGNC:4597]100250.000-0.0520No
37PMP2peripheral myelin protein 2 [Source:HGNC Symbol;Acc:HGNC:9117]104280.000-0.0629No
38RTN1reticulon 1 [Source:HGNC Symbol;Acc:HGNC:10467]105690.000-0.0667No
39CHGAchromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]106200.000-0.0680No
40CHGBchromogranin B [Source:HGNC Symbol;Acc:HGNC:1930]106400.000-0.0685No
41SPARCL1SPARC like 1 [Source:HGNC Symbol;Acc:HGNC:11220]114310.000-0.0899No
42ERC2ELKS/RAB6-interacting/CAST family member 2 [Source:HGNC Symbol;Acc:HGNC:31922]115500.000-0.0931No
43TSPAN7tetraspanin 7 [Source:HGNC Symbol;Acc:HGNC:11854]116140.000-0.0948No
44SLC6A15solute carrier family 6 member 15 [Source:HGNC Symbol;Acc:HGNC:13621]119450.000-0.1037No
45SIGLEC15sialic acid binding Ig like lectin 15 [Source:HGNC Symbol;Acc:HGNC:27596]119780.000-0.1046No
46NME5NME/NM23 family member 5 [Source:HGNC Symbol;Acc:HGNC:7853]120080.000-0.1054No
47NAP1L2nucleosome assembly protein 1 like 2 [Source:HGNC Symbol;Acc:HGNC:7638]121350.000-0.1088No
48ITGBL1integrin subunit beta like 1 [Source:HGNC Symbol;Acc:HGNC:6164]125120.000-0.1190No
49GAD1glutamate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:4092]125510.000-0.1200No
50GAP43growth associated protein 43 [Source:HGNC Symbol;Acc:HGNC:4140]128690.000-0.1286No
51GCGRglucagon receptor [Source:HGNC Symbol;Acc:HGNC:4192]131840.000-0.1371No
52ESRRGestrogen related receptor gamma [Source:HGNC Symbol;Acc:HGNC:3474]133520.000-0.1416No
53VIPR2vasoactive intestinal peptide receptor 2 [Source:HGNC Symbol;Acc:HGNC:12695]134400.000-0.1440No
54TMEM100transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]135590.000-0.1472No
55RELNreelin [Source:HGNC Symbol;Acc:HGNC:9957]138900.000-0.1561No
56GHRHgrowth hormone releasing hormone [Source:HGNC Symbol;Acc:HGNC:4265]152390.000-0.1926No
57SV2Bsynaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874]157340.000-0.2059No
58CPEcarboxypeptidase E [Source:HGNC Symbol;Acc:HGNC:2303]158390.000-0.2087No
59TCEAL2transcription elongation factor A like 2 [Source:HGNC Symbol;Acc:HGNC:29818]159670.000-0.2122No
60XKX-linked Kx blood group [Source:HGNC Symbol;Acc:HGNC:12811]162960.000-0.2211No
61GPM6Aglycoprotein M6A [Source:HGNC Symbol;Acc:HGNC:4460]165860.000-0.2289No
62TRIB2tribbles pseudokinase 2 [Source:HGNC Symbol;Acc:HGNC:30809]168660.000-0.2364No
63SYT1synaptotagmin 1 [Source:HGNC Symbol;Acc:HGNC:11509]170240.000-0.2407No
64GPR37G protein-coupled receptor 37 [Source:HGNC Symbol;Acc:HGNC:4494]175250.000-0.2542No
65SLC12A3solute carrier family 12 member 3 [Source:HGNC Symbol;Acc:HGNC:10912]176060.000-0.2564No
66TRIM9tripartite motif containing 9 [Source:HGNC Symbol;Acc:HGNC:16288]178340.000-0.2625No
67KITKIT proto-oncogene, receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6342]183420.000-0.2762No
68FZD3frizzled class receptor 3 [Source:HGNC Symbol;Acc:HGNC:4041]192780.000-0.3015No
69NDNnecdin, MAGE family member [Source:HGNC Symbol;Acc:HGNC:7675]193390.000-0.3032No
70GABRB1gamma-aminobutyric acid type A receptor subunit beta1 [Source:HGNC Symbol;Acc:HGNC:4081]200220.000-0.3216No
71GABRA1gamma-aminobutyric acid type A receptor subunit alpha1 [Source:HGNC Symbol;Acc:HGNC:4075]200640.000-0.3227No
72GABRA5gamma-aminobutyric acid type A receptor subunit alpha5 [Source:HGNC Symbol;Acc:HGNC:4079]200660.000-0.3228No
73NOL4nucleolar protein 4 [Source:HGNC Symbol;Acc:HGNC:7870]203990.000-0.3317No
74WIF1WNT inhibitory factor 1 [Source:HGNC Symbol;Acc:HGNC:18081]204020.000-0.3318No
75CFAP69cilia and flagella associated protein 69 [Source:HGNC Symbol;Acc:HGNC:26107]205010.000-0.3344No
76SFRP1secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]207130.000-0.3402No
77DLGAP2DLG associated protein 2 [Source:HGNC Symbol;Acc:HGNC:2906]212070.000-0.3535No
78SNAP25synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]212920.000-0.3558No
79FAM153Bfamily with sequence similarity 153 member B [Source:HGNC Symbol;Acc:HGNC:27323]215460.000-0.3626No
80CRYMcrystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]215720.000-0.3633No
81SNAP91synaptosome associated protein 91 [Source:HGNC Symbol;Acc:HGNC:14986]218410.000-0.3705No
82LMO3LIM domain only 3 [Source:HGNC Symbol;Acc:HGNC:6643]219180.000-0.3726No
83ANK3ankyrin 3 [Source:HGNC Symbol;Acc:HGNC:494]222130.000-0.3806No
84GRIK2glutamate ionotropic receptor kainate type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4580]224860.000-0.3879No
85ADCY1adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]227010.000-0.3937No
86FGF9fibroblast growth factor 9 [Source:HGNC Symbol;Acc:HGNC:3687]227250.000-0.3943No
87ALDH1A1aldehyde dehydrogenase 1 family member A1 [Source:HGNC Symbol;Acc:HGNC:402]230030.000-0.4018No
88SOBPsine oculis binding protein homolog [Source:HGNC Symbol;Acc:HGNC:29256]232930.000-0.4097No
89SLC6A1solute carrier family 6 member 1 [Source:HGNC Symbol;Acc:HGNC:11042]233870.000-0.4122No
90PLCB1phospholipase C beta 1 [Source:HGNC Symbol;Acc:HGNC:15917]234050.000-0.4126No
91PNMA2PNMA family member 2 [Source:HGNC Symbol;Acc:HGNC:9159]238700.000-0.4252No
92A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]243780.000-0.4389No
93SLC1A3solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]244390.000-0.4405No
94PLGLAplasminogen like A (pseudogene) [Source:HGNC Symbol;Acc:HGNC:9074]244940.000-0.4420No
95RCAN2regulator of calcineurin 2 [Source:HGNC Symbol;Acc:HGNC:3041]246650.000-0.4466No
96GABRR2gamma-aminobutyric acid type A receptor subunit rho2 [Source:HGNC Symbol;Acc:HGNC:4091]248450.000-0.4514No
97SCN2Asodium voltage-gated channel alpha subunit 2 [Source:HGNC Symbol;Acc:HGNC:10588]250510.000-0.4570No
98MMP27matrix metallopeptidase 27 [Source:HGNC Symbol;Acc:HGNC:14250]256510.000-0.4732No
99RIT2Ras like without CAAX 2 [Source:HGNC Symbol;Acc:HGNC:10017]257360.000-0.4755No
100PCP4Purkinje cell protein 4 [Source:HGNC Symbol;Acc:HGNC:8742]257620.000-0.4761No
101ARPP21cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]258480.000-0.4784No
102PEG3paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]263710.000-0.4926No
103SATB1SATB homeobox 1 [Source:HGNC Symbol;Acc:HGNC:10541]265110.000-0.4963No
104TRILTLR4 interactor with leucine rich repeats [Source:HGNC Symbol;Acc:HGNC:22200]266770.000-0.5008No
105ZNF536zinc finger protein 536 [Source:HGNC Symbol;Acc:HGNC:29025]268100.000-0.5044No
106MAP7microtubule associated protein 7 [Source:HGNC Symbol;Acc:HGNC:6869]282450.000-0.5432No
107ST3GAL6ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18080]28786-0.120-0.5563No
108RAPGEF4Rap guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:16626]29139-0.210-0.5632No
109GLDCglycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]29897-0.320-0.5797No
110CAB39Lcalcium binding protein 39 like [Source:HGNC Symbol;Acc:HGNC:20290]30361-0.408-0.5871No
111MAGEH1MAGE family member H1 [Source:HGNC Symbol;Acc:HGNC:24092]30850-0.544-0.5935No
112CPEB3cytoplasmic polyadenylation element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:21746]31170-0.633-0.5942No
113PLP1proteolipid protein 1 [Source:HGNC Symbol;Acc:HGNC:9086]32090-0.905-0.6078No
114GPRC5BG protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]32682-1.081-0.6103Yes
115TUBB4Atubulin beta 4A class IVa [Source:HGNC Symbol;Acc:HGNC:20774]32742-1.110-0.5980Yes
116SLC12A5solute carrier family 12 member 5 [Source:HGNC Symbol;Acc:HGNC:13818]32903-1.167-0.5878Yes
117ANK2ankyrin 2 [Source:HGNC Symbol;Acc:HGNC:493]33075-1.232-0.5770Yes
118CA2carbonic anhydrase 2 [Source:HGNC Symbol;Acc:HGNC:1373]33098-1.242-0.5621Yes
119SCN1Bsodium voltage-gated channel beta subunit 1 [Source:HGNC Symbol;Acc:HGNC:10586]33637-1.448-0.5585Yes
120SELENOPselenoprotein P [Source:HGNC Symbol;Acc:HGNC:10751]33716-1.477-0.5422Yes
121GATMglycine amidinotransferase [Source:HGNC Symbol;Acc:HGNC:4175]34159-1.699-0.5329Yes
122DUSP6dual specificity phosphatase 6 [Source:HGNC Symbol;Acc:HGNC:3072]34160-1.700-0.5117Yes
123GPNMBglycoprotein nmb [Source:HGNC Symbol;Acc:HGNC:4462]34507-1.891-0.4974Yes
124CDK5R1cyclin dependent kinase 5 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:1775]34568-1.936-0.4749Yes
125NUDT11nudix hydrolase 11 [Source:HGNC Symbol;Acc:HGNC:18011]34608-1.945-0.4516Yes
126TMOD1tropomodulin 1 [Source:HGNC Symbol;Acc:HGNC:11871]34797-1.975-0.4321Yes
127MEF2Cmyocyte enhancer factor 2C [Source:HGNC Symbol;Acc:HGNC:6996]35113-2.177-0.4134Yes
128ATP1A2ATPase Na+/K+ transporting subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:800]35395-2.370-0.3914Yes
129MAFBMAF bZIP transcription factor B [Source:HGNC Symbol;Acc:HGNC:6408]35687-2.603-0.3667Yes
130EMP1epithelial membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:3333]35969-2.824-0.3391Yes
131SORL1sortilin related receptor 1 [Source:HGNC Symbol;Acc:HGNC:11185]36065-2.952-0.3048Yes
132METTL7Amethyltransferase like 7A [Source:HGNC Symbol;Acc:HGNC:24550]36434-3.392-0.2723Yes
133KIF5Ckinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]36437-3.405-0.2299Yes
134NRN1neuritin 1 [Source:HGNC Symbol;Acc:HGNC:17972]36469-3.443-0.1877Yes
135TRIM2tripartite motif containing 2 [Source:HGNC Symbol;Acc:HGNC:15974]36566-3.569-0.1457Yes
136AK5adenylate kinase 5 [Source:HGNC Symbol;Acc:HGNC:365]36814-4.036-0.1020Yes
137SORBS1sorbin and SH3 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14565]36858-4.124-0.0516Yes
138GPR19G protein-coupled receptor 19 [Source:HGNC Symbol;Acc:HGNC:4473]37010-4.6330.0022Yes
Table: GSEA details [plain text format]



Fig 2: KRAS.KIDNEY_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.KIDNEY_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.KIDNEY_UP.V1_UP