Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetKRAS.LUNG.BREAST_UP.V1_UP
Enrichment Score (ES)0.5633555
Normalized Enrichment Score (NES)1.4611586
Nominal p-value0.0
FDR q-value0.15951683
FWER p-Value0.149
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.LUNG.BREAST_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CSF3colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]114.9730.0476Yes
2PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]324.8870.0942Yes
3LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]334.8830.1413Yes
4MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]664.6480.1852Yes
5ISG20interferon stimulated exonuclease gene 20 [Source:HGNC Symbol;Acc:HGNC:6130]804.5890.2291Yes
6TRAF1TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]2533.6610.2598Yes
7ID2inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]3583.3050.2888Yes
8ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]3653.2900.3204Yes
9OSBP2oxysterol binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8504]3863.2460.3511Yes
10IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]4693.1030.3788Yes
11POLMDNA polymerase mu [Source:HGNC Symbol;Acc:HGNC:9185]5052.9990.4068Yes
12TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]5312.9500.4346Yes
13IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]5482.9090.4622Yes
14GLRXglutaredoxin [Source:HGNC Symbol;Acc:HGNC:4330]6672.7110.4851Yes
15TAGLN3transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]10402.1460.4958Yes
16DOCK4dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:HGNC:19192]10622.1250.5157Yes
17NDOR1NADPH dependent diflavin oxidoreductase 1 [Source:HGNC Symbol;Acc:HGNC:29838]13111.8630.5269Yes
18DHRS9dehydrogenase/reductase 9 [Source:HGNC Symbol;Acc:HGNC:16888]14591.7190.5395Yes
19TNFSF15TNF superfamily member 15 [Source:HGNC Symbol;Acc:HGNC:11931]16091.5990.5509Yes
20CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]22061.3370.5477Yes
21GPR4G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:4497]23451.2470.5559Yes
22IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]27261.0590.5559Yes
23HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]28131.0180.5634Yes
24RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]41590.5590.5323No
25MYH2myosin heavy chain 2 [Source:HGNC Symbol;Acc:HGNC:7572]41760.5520.5372No
26CDSNcorneodesmosin [Source:HGNC Symbol;Acc:HGNC:1802]43250.5160.5382No
27SH2D2ASH2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:10821]45950.4420.5352No
28INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]46230.4360.5386No
29BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]50090.3360.5315No
30LDB3LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710]51410.3010.5308No
31TERTtelomerase reverse transcriptase [Source:HGNC Symbol;Acc:HGNC:11730]51930.2870.5322No
32PRDM1PR/SET domain 1 [Source:HGNC Symbol;Acc:HGNC:9346]53010.2660.5319No
33KCNJ14potassium inwardly rectifying channel subfamily J member 14 [Source:HGNC Symbol;Acc:HGNC:6260]54420.2340.5303No
34FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]61160.0650.5127No
35AKT2AKT serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:392]63520.0070.5065No
36CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]64440.0000.5040No
37SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]65960.0000.4999No
38RNASE1ribonuclease A family member 1, pancreatic [Source:HGNC Symbol;Acc:HGNC:10044]73100.0000.4806No
39SLCO5A1solute carrier organic anion transporter family member 5A1 [Source:HGNC Symbol;Acc:HGNC:19046]73300.0000.4801No
40CD247CD247 molecule [Source:HGNC Symbol;Acc:HGNC:1677]82070.0000.4564No
41SHOXshort stature homeobox [Source:HGNC Symbol;Acc:HGNC:10853]82610.0000.4550No
42CALB1calbindin 1 [Source:HGNC Symbol;Acc:HGNC:1434]88780.0000.4383No
43CLSTN2calsyntenin 2 [Source:HGNC Symbol;Acc:HGNC:17448]89960.0000.4351No
44ADAM19ADAM metallopeptidase domain 19 [Source:HGNC Symbol;Acc:HGNC:197]99870.0000.4083No
45LAT2linker for activation of T cells family member 2 [Source:HGNC Symbol;Acc:HGNC:12749]105280.0000.3937No
46FAM174Bfamily with sequence similarity 174 member B [Source:HGNC Symbol;Acc:HGNC:34339]105570.0000.3930No
47PPBPpro-platelet basic protein [Source:HGNC Symbol;Acc:HGNC:9240]110510.0000.3796No
48TFDP3transcription factor Dp family member 3 [Source:HGNC Symbol;Acc:HGNC:24603]112680.0000.3738No
49TSPAN1tetraspanin 1 [Source:HGNC Symbol;Acc:HGNC:20657]116160.0000.3644No
50CLPScolipase [Source:HGNC Symbol;Acc:HGNC:2085]117850.0000.3598No
51IGFBP3insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]118810.0000.3573No
52ESM1endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]120000.0000.3541No
53TAAR5trace amine associated receptor 5 [Source:HGNC Symbol;Acc:HGNC:30236]126470.0000.3366No
54GBA3glucosylceramidase beta 3 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:19069]127600.0000.3335No
55RBP4retinol binding protein 4 [Source:HGNC Symbol;Acc:HGNC:9922]129060.0000.3296No
56RBMXL2RBMX like 2 [Source:HGNC Symbol;Acc:HGNC:17886]130380.0000.3261No
57GULP1GULP PTB domain containing engulfment adaptor 1 [Source:HGNC Symbol;Acc:HGNC:18649]132070.0000.3215No
58HOXD11homeobox D11 [Source:HGNC Symbol;Acc:HGNC:5134]132820.0000.3195No
59OR2B6olfactory receptor family 2 subfamily B member 6 [Source:HGNC Symbol;Acc:HGNC:8241]135410.0000.3125No
60KIAA1549LKIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]137570.0000.3067No
61RELNreelin [Source:HGNC Symbol;Acc:HGNC:9957]138900.0000.3032No
62IL37interleukin 37 [Source:HGNC Symbol;Acc:HGNC:15563]139050.0000.3028No
63RETNresistin [Source:HGNC Symbol;Acc:HGNC:20389]140050.0000.3001No
64HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]144900.0000.2870No
65ZP4zona pellucida glycoprotein 4 [Source:HGNC Symbol;Acc:HGNC:15770]148750.0000.2766No
66G0S2G0/G1 switch 2 [Source:HGNC Symbol;Acc:HGNC:30229]158120.0000.2513No
67IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]158960.0000.2490No
68AMELYamelogenin Y-linked [Source:HGNC Symbol;Acc:HGNC:462]160010.0000.2462No
69MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]171720.0000.2145No
70GRPgastrin releasing peptide [Source:HGNC Symbol;Acc:HGNC:4605]171740.0000.2145No
71SEMA3Bsemaphorin 3B [Source:HGNC Symbol;Acc:HGNC:10724]179050.0000.1948No
72CEACAM3CEA cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:1815]179320.0000.1941No
73IGHV3-48immunoglobulin heavy variable 3-48 [Source:HGNC Symbol;Acc:HGNC:5606]182860.0000.1845No
74BMP6bone morphogenetic protein 6 [Source:HGNC Symbol;Acc:HGNC:1073]191440.0000.1613No
75MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]191750.0000.1605No
76NRLneural retina leucine zipper [Source:HGNC Symbol;Acc:HGNC:8002]194630.0000.1527No
77CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]195280.0000.1510No
78CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]195370.0000.1508No
79CXCL3C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]195390.0000.1508No
80CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]195410.0000.1507No
81TBX3T-box transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11602]198040.0000.1436No
82HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]198620.0000.1421No
83GABRA3gamma-aminobutyric acid type A receptor subunit alpha3 [Source:HGNC Symbol;Acc:HGNC:4077]200680.0000.1366No
84NR1H4nuclear receptor subfamily 1 group H member 4 [Source:HGNC Symbol;Acc:HGNC:7967]200690.0000.1366No
85NELL2neural EGFL like 2 [Source:HGNC Symbol;Acc:HGNC:7751]206990.0000.1195No
86SLC25A31solute carrier family 25 member 31 [Source:HGNC Symbol;Acc:HGNC:25319]207010.0000.1195No
87NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]207840.0000.1173No
88TSPY1testis specific protein Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:12381]208940.0000.1143No
89SNAP25synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]212920.0000.1036No
90KCNK15potassium two pore domain channel subfamily K member 15 [Source:HGNC Symbol;Acc:HGNC:13814]213810.0000.1012No
91DNAH9dynein axonemal heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:2953]215600.0000.0964No
92FAM155Bfamily with sequence similarity 155 member B [Source:HGNC Symbol;Acc:HGNC:30701]215810.0000.0958No
93CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]216660.0000.0936No
94SNAP91synaptosome associated protein 91 [Source:HGNC Symbol;Acc:HGNC:14986]218410.0000.0889No
95IFNA8interferon alpha 8 [Source:HGNC Symbol;Acc:HGNC:5429]218570.0000.0885No
96CHRNA2cholinergic receptor nicotinic alpha 2 subunit [Source:HGNC Symbol;Acc:HGNC:1956]219420.0000.0862No
97HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]220970.0000.0820No
98PTPRRprotein tyrosine phosphatase receptor type R [Source:HGNC Symbol;Acc:HGNC:9680]222330.0000.0784No
99TTC22tetratricopeptide repeat domain 22 [Source:HGNC Symbol;Acc:HGNC:26067]225800.0000.0690No
100PRSS3serine protease 3 [Source:HGNC Symbol;Acc:HGNC:9486]226540.0000.0670No
101SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]227930.0000.0633No
102PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]228930.0000.0606No
103FNDC8fibronectin type III domain containing 8 [Source:HGNC Symbol;Acc:HGNC:25286]231880.0000.0527No
104ITGA2integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]237910.0000.0364No
105A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]243780.0000.0205No
106PRLprolactin [Source:HGNC Symbol;Acc:HGNC:9445]248420.0000.0080No
107PRYPTPN13 like Y-linked [Source:HGNC Symbol;Acc:HGNC:14024]248490.0000.0078No
108MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]256580.000-0.0141No
109SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]257550.000-0.0167No
110KRT34keratin 34 [Source:HGNC Symbol;Acc:HGNC:6452]269250.000-0.0483No
111CRCT1cysteine rich C-terminal 1 [Source:HGNC Symbol;Acc:HGNC:29875]271400.000-0.0541No
112RMSTrhabdomyosarcoma 2 associated transcript [Source:HGNC Symbol;Acc:HGNC:29893]272310.000-0.0565No
113NAV3neuron navigator 3 [Source:HGNC Symbol;Acc:HGNC:15998]273610.000-0.0600No
114CMKLR1chemerin chemokine-like receptor 1 [Source:HGNC Symbol;Acc:HGNC:2121]274010.000-0.0611No
115CD1ACD1a molecule [Source:HGNC Symbol;Acc:HGNC:1634]280130.000-0.0776No
116CCR6C-C motif chemokine receptor 6 [Source:HGNC Symbol;Acc:HGNC:1607]280520.000-0.0786No
117ST3GAL6ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18080]28786-0.120-0.0973No
118ZNF639zinc finger protein 639 [Source:HGNC Symbol;Acc:HGNC:30950]28884-0.144-0.0985No
119ADAMTS6ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]29061-0.192-0.1015No
120SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]29065-0.194-0.0997No
121CD37CD37 molecule [Source:HGNC Symbol;Acc:HGNC:1666]29174-0.216-0.1005No
122OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]29500-0.301-0.1064No
123GFI1growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]29718-0.320-0.1092No
124CTNNA2catenin alpha 2 [Source:HGNC Symbol;Acc:HGNC:2510]29862-0.320-0.1100No
125MKRN3makorin ring finger protein 3 [Source:HGNC Symbol;Acc:HGNC:7114]30063-0.336-0.1122No
126HPNhepsin [Source:HGNC Symbol;Acc:HGNC:5155]30488-0.443-0.1194No
127STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]30519-0.453-0.1158No
128ADAM8ADAM metallopeptidase domain 8 [Source:HGNC Symbol;Acc:HGNC:215]31367-0.692-0.1320No
129ITPKAinositol-trisphosphate 3-kinase A [Source:HGNC Symbol;Acc:HGNC:6178]32265-0.958-0.1471No
130LILRA6leukocyte immunoglobulin like receptor A6 [Source:HGNC Symbol;Acc:HGNC:15495]32529-1.026-0.1443No
131KCNC1potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]33655-1.453-0.1607No
132ATG10autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]33907-1.563-0.1525No
133CCDC181coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]33992-1.616-0.1392No
134RPS4Y1ribosomal protein S4 Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:10425]34331-1.786-0.1311No
135GYPCglycophorin C (Gerbich blood group) [Source:HGNC Symbol;Acc:HGNC:4704]34584-1.941-0.1192No
136PDE2Aphosphodiesterase 2A [Source:HGNC Symbol;Acc:HGNC:8777]34855-2.013-0.1071No
137SLCO4A1solute carrier organic anion transporter family member 4A1 [Source:HGNC Symbol;Acc:HGNC:10953]35569-2.497-0.1023No
138KIF5Ckinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]36437-3.405-0.0930No
139KIF5Akinesin family member 5A [Source:HGNC Symbol;Acc:HGNC:6323]36479-3.458-0.0607No
140KCNC2potassium voltage-gated channel subfamily C member 2 [Source:HGNC Symbol;Acc:HGNC:6234]36745-3.884-0.0304No
141ANGPTL4angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]36857-4.1240.0063No
Table: GSEA details [plain text format]



Fig 2: KRAS.LUNG.BREAST_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.LUNG.BREAST_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.LUNG.BREAST_UP.V1_UP