Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetKRAS.LUNG_UP.V1_UP
Enrichment Score (ES)0.5012006
Normalized Enrichment Score (NES)1.296003
Nominal p-value0.013513514
FDR q-value0.1625425
FWER p-Value0.488
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.LUNG_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CSF3colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]114.9730.0483Yes
2TNNT2troponin T2, cardiac type [Source:HGNC Symbol;Acc:HGNC:11949]534.7760.0939Yes
3C3AR1complement C3a receptor 1 [Source:HGNC Symbol;Acc:HGNC:1319]1204.3560.1347Yes
4BCL2A1BCL2 related protein A1 [Source:HGNC Symbol;Acc:HGNC:991]1454.2090.1753Yes
5SLC6A4solute carrier family 6 member 4 [Source:HGNC Symbol;Acc:HGNC:11050]1644.1000.2149Yes
6NESnestin [Source:HGNC Symbol;Acc:HGNC:7756]3183.4070.2441Yes
7ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]3653.2900.2750Yes
8IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]4693.1030.3025Yes
9POLMDNA polymerase mu [Source:HGNC Symbol;Acc:HGNC:9185]5052.9990.3309Yes
10IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]5482.9090.3582Yes
11DCBLD2discoidin, CUB and LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24627]6342.7630.3830Yes
12SLC18A1solute carrier family 18 member A1 [Source:HGNC Symbol;Acc:HGNC:10934]8722.3270.3993Yes
13DOCK4dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:HGNC:19192]10622.1250.4150Yes
14MT3metallothionein 3 [Source:HGNC Symbol;Acc:HGNC:7408]12161.9350.4298Yes
15NDOR1NADPH dependent diflavin oxidoreductase 1 [Source:HGNC Symbol;Acc:HGNC:29838]13111.8630.4454Yes
16TMEM176Btransmembrane protein 176B [Source:HGNC Symbol;Acc:HGNC:29596]13281.8460.4630Yes
17IKZF1IKAROS family zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:13176]13761.8000.4794Yes
18PRKG2protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]16071.6000.4888Yes
19HS3ST3A1heparan sulfate-glucosamine 3-sulfotransferase 3A1 [Source:HGNC Symbol;Acc:HGNC:5196]21801.3540.4866Yes
20ZBTB48zinc finger and BTB domain containing 48 [Source:HGNC Symbol;Acc:HGNC:4930]25101.1630.4890Yes
21IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]27261.0590.4936Yes
22HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]28131.0180.5012Yes
23CYP4F8cytochrome P450 family 4 subfamily F member 8 [Source:HGNC Symbol;Acc:HGNC:2648]40350.5970.4740No
24RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]41590.5590.4761No
25MYH2myosin heavy chain 2 [Source:HGNC Symbol;Acc:HGNC:7572]41760.5520.4811No
26SH2D2ASH2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:10821]45950.4420.4741No
27INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]46230.4360.4776No
28AURKCaurora kinase C [Source:HGNC Symbol;Acc:HGNC:11391]47920.3970.4770No
29FBXO4F-box protein 4 [Source:HGNC Symbol;Acc:HGNC:13583]49470.3550.4763No
30ZNF821zinc finger protein 821 [Source:HGNC Symbol;Acc:HGNC:28043]51370.3020.4741No
31LDB3LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710]51410.3010.4770No
32OGDHLoxoglutarate dehydrogenase like [Source:HGNC Symbol;Acc:HGNC:25590]62940.0180.4460No
33AKT2AKT serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:392]63520.0070.4445No
34CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]64440.0000.4420No
35SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]65960.0000.4380No
36CRYAAcrystallin alpha A [Source:HGNC Symbol;Acc:HGNC:2388]67170.0000.4347No
37ASGR2asialoglycoprotein receptor 2 [Source:HGNC Symbol;Acc:HGNC:743]70190.0000.4266No
38RNASE1ribonuclease A family member 1, pancreatic [Source:HGNC Symbol;Acc:HGNC:10044]73100.0000.4187No
39SLCO5A1solute carrier organic anion transporter family member 5A1 [Source:HGNC Symbol;Acc:HGNC:19046]73300.0000.4182No
40CD247CD247 molecule [Source:HGNC Symbol;Acc:HGNC:1677]82070.0000.3945No
41FRMD1FERM domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21240]86400.0000.3828No
42CLEC4AC-type lectin domain family 4 member A [Source:HGNC Symbol;Acc:HGNC:13257]95040.0000.3594No
43NDNFneuron derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:26256]95360.0000.3586No
44KCNA5potassium voltage-gated channel subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:6224]97660.0000.3524No
45GRIN2Aglutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]103950.0000.3354No
46ADA2adenosine deaminase 2 [Source:HGNC Symbol;Acc:HGNC:1839]111340.0000.3154No
47CCT8L2chaperonin containing TCP1 subunit 8 like 2 [Source:HGNC Symbol;Acc:HGNC:15553]112250.0000.3130No
48N4BP2L2-IT2N4BPL2 intronic transcript 2 [Source:HGNC Symbol;Acc:HGNC:25038]115150.0000.3052No
49TSPAN1tetraspanin 1 [Source:HGNC Symbol;Acc:HGNC:20657]116160.0000.3025No
50PRG3proteoglycan 3, pro eosinophil major basic protein 2 [Source:HGNC Symbol;Acc:HGNC:9363]116220.0000.3023No
51NPHS1NPHS1 adhesion molecule, nephrin [Source:HGNC Symbol;Acc:HGNC:7908]117580.0000.2987No
52SLC6A11solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]119490.0000.2935No
53SIGLEC15sialic acid binding Ig like lectin 15 [Source:HGNC Symbol;Acc:HGNC:27596]119780.0000.2928No
54GBA3glucosylceramidase beta 3 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:19069]127600.0000.2717No
55RBP4retinol binding protein 4 [Source:HGNC Symbol;Acc:HGNC:9922]129060.0000.2677No
56PPP1R14Dprotein phosphatase 1 regulatory inhibitor subunit 14D [Source:HGNC Symbol;Acc:HGNC:14953]131290.0000.2617No
57HOXD11homeobox D11 [Source:HGNC Symbol;Acc:HGNC:5134]132820.0000.2576No
58LILRB1leukocyte immunoglobulin like receptor B1 [Source:HGNC Symbol;Acc:HGNC:6605]135030.0000.2517No
59OR2B6olfactory receptor family 2 subfamily B member 6 [Source:HGNC Symbol;Acc:HGNC:8241]135410.0000.2507No
60KIAA1549LKIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]137570.0000.2448No
61RELNreelin [Source:HGNC Symbol;Acc:HGNC:9957]138900.0000.2413No
62RETNresistin [Source:HGNC Symbol;Acc:HGNC:20389]140050.0000.2382No
63HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]144900.0000.2251No
64PCDH17protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]147170.0000.2190No
65RGS4regulator of G protein signaling 4 [Source:HGNC Symbol;Acc:HGNC:10000]148350.0000.2158No
66PAX4paired box 4 [Source:HGNC Symbol;Acc:HGNC:8618]149270.0000.2133No
67LRIG1leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]152910.0000.2035No
68HTR75-hydroxytryptamine receptor 7 [Source:HGNC Symbol;Acc:HGNC:5302]155180.0000.1974No
69BTCbetacellulin [Source:HGNC Symbol;Acc:HGNC:1121]156380.0000.1942No
70G0S2G0/G1 switch 2 [Source:HGNC Symbol;Acc:HGNC:30229]158120.0000.1895No
71FUT5fucosyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4016]177430.0000.1373No
72TAS2R1taste 2 receptor member 1 [Source:HGNC Symbol;Acc:HGNC:14909]180110.0000.1300No
73SEMG2semenogelin 2 [Source:HGNC Symbol;Acc:HGNC:10743]183530.0000.1208No
74MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]191750.0000.0986No
75NKX2-5NK2 homeobox 5 [Source:HGNC Symbol;Acc:HGNC:2488]192730.0000.0960No
76NGFnerve growth factor [Source:HGNC Symbol;Acc:HGNC:7808]193570.0000.0937No
77MIR124-1HGMIR124-1 host gene [Source:HGNC Symbol;Acc:HGNC:27231]195190.0000.0894No
78CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]195280.0000.0891No
79CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]195410.0000.0888No
80TBX3T-box transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11602]198040.0000.0817No
81CFAP69cilia and flagella associated protein 69 [Source:HGNC Symbol;Acc:HGNC:26107]205010.0000.0629No
82DEFA5defensin alpha 5 [Source:HGNC Symbol;Acc:HGNC:2764]206220.0000.0596No
83NELL2neural EGFL like 2 [Source:HGNC Symbol;Acc:HGNC:7751]206990.0000.0576No
84TSPY1testis specific protein Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:12381]208940.0000.0523No
85WNT7AWnt family member 7A [Source:HGNC Symbol;Acc:HGNC:12786]212520.0000.0427No
86ADCYAP1R1ADCYAP receptor type I [Source:HGNC Symbol;Acc:HGNC:242]213990.0000.0387No
87ALLCallantoicase [Source:HGNC Symbol;Acc:HGNC:17377]214510.0000.0373No
88LINC00472long intergenic non-protein coding RNA 472 [Source:HGNC Symbol;Acc:HGNC:21380]217940.0000.0281No
89IFNA8interferon alpha 8 [Source:HGNC Symbol;Acc:HGNC:5429]218570.0000.0264No
90UGT1A10UDP glucuronosyltransferase family 1 member A10 [Source:HGNC Symbol;Acc:HGNC:12531]221110.0000.0196No
91PTPRRprotein tyrosine phosphatase receptor type R [Source:HGNC Symbol;Acc:HGNC:9680]222330.0000.0163No
92ANO1anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]222610.0000.0156No
93TEX13Atestis expressed 13A [Source:HGNC Symbol;Acc:HGNC:11735]223350.0000.0136No
94GRIP2glutamate receptor interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:23841]225400.0000.0081No
95TTC22tetratricopeptide repeat domain 22 [Source:HGNC Symbol;Acc:HGNC:26067]225800.0000.0070No
96SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]227930.0000.0013No
97PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]228930.000-0.0014No
98FNDC8fibronectin type III domain containing 8 [Source:HGNC Symbol;Acc:HGNC:25286]231880.000-0.0094No
99ITGA2integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]237910.000-0.0257No
100MAGEA6MAGE family member A6 [Source:HGNC Symbol;Acc:HGNC:6804]240530.000-0.0327No
101TMEM238Ltransmembrane protein 238 like [Source:HGNC Symbol;Acc:HGNC:44356]242020.000-0.0367No
102CELA2Bchymotrypsin like elastase 2B [Source:HGNC Symbol;Acc:HGNC:29995]244640.000-0.0438No
103ADAMTS3ADAM metallopeptidase with thrombospondin type 1 motif 3 [Source:HGNC Symbol;Acc:HGNC:219]247550.000-0.0516No
104IGSF1immunoglobulin superfamily member 1 [Source:HGNC Symbol;Acc:HGNC:5948]254190.000-0.0696No
105MMP20matrix metallopeptidase 20 [Source:HGNC Symbol;Acc:HGNC:7167]256430.000-0.0756No
106ZNF749zinc finger protein 749 [Source:HGNC Symbol;Acc:HGNC:32783]259490.000-0.0839No
107SLC16A8solute carrier family 16 member 8 [Source:HGNC Symbol;Acc:HGNC:16270]263330.000-0.0942No
108KIR2DL3killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 3 [Source:HGNC Symbol;Acc:HGNC:6331]265710.000-0.1007No
109SARM1sterile alpha and TIR motif containing 1 [Source:HGNC Symbol;Acc:HGNC:17074]267620.000-0.1058No
110NAV3neuron navigator 3 [Source:HGNC Symbol;Acc:HGNC:15998]273610.000-0.1220No
111CYP2J2cytochrome P450 family 2 subfamily J member 2 [Source:HGNC Symbol;Acc:HGNC:2634]277270.000-0.1319No
112CD1ACD1a molecule [Source:HGNC Symbol;Acc:HGNC:1634]280130.000-0.1396No
113CD48CD48 molecule [Source:HGNC Symbol;Acc:HGNC:1683]280750.000-0.1412No
114CD80CD80 molecule [Source:HGNC Symbol;Acc:HGNC:1700]281360.000-0.1428No
115ST3GAL6ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18080]28786-0.120-0.1592No
116ZNF639zinc finger protein 639 [Source:HGNC Symbol;Acc:HGNC:30950]28884-0.144-0.1604No
117DOCK2dedicator of cytokinesis 2 [Source:HGNC Symbol;Acc:HGNC:2988]29589-0.318-0.1764No
118GPR3G protein-coupled receptor 3 [Source:HGNC Symbol;Acc:HGNC:4484]29966-0.320-0.1834No
119BANK1B cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:HGNC:18233]30201-0.372-0.1861No
120ZBTB44zinc finger and BTB domain containing 44 [Source:HGNC Symbol;Acc:HGNC:25001]30302-0.392-0.1850No
121HPNhepsin [Source:HGNC Symbol;Acc:HGNC:5155]30488-0.443-0.1857No
122ABCB1ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]31270-0.658-0.2004No
123ADAM8ADAM metallopeptidase domain 8 [Source:HGNC Symbol;Acc:HGNC:215]31367-0.692-0.1962No
124EVI2Aecotropic viral integration site 2A [Source:HGNC Symbol;Acc:HGNC:3499]31623-0.770-0.1956No
125CLSTN3calsyntenin 3 [Source:HGNC Symbol;Acc:HGNC:18371]32004-0.874-0.1973No
126LAG3lymphocyte activating 3 [Source:HGNC Symbol;Acc:HGNC:6476]32129-0.915-0.1917No
127SDCCAG8SHH signaling and ciliogenesis regulator SDCCAG8 [Source:HGNC Symbol;Acc:HGNC:10671]32137-0.918-0.1829No
128JAK3Janus kinase 3 [Source:HGNC Symbol;Acc:HGNC:6193]32233-0.949-0.1762No
129FABP3fatty acid binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3557]33406-1.343-0.1948No
130ATG10autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]33907-1.563-0.1930No
131EGFL7EGF like domain multiple 7 [Source:HGNC Symbol;Acc:HGNC:20594]34686-1.945-0.1951No
132TMEM158transmembrane protein 158 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:30293]35278-2.290-0.1887No
133NRP1neuropilin 1 [Source:HGNC Symbol;Acc:HGNC:8004]35408-2.385-0.1688No
134B3GNTL1UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]35432-2.397-0.1460No
135HROBhomologous recombination factor with OB-fold [Source:HGNC Symbol;Acc:HGNC:28460]35547-2.482-0.1248No
136SLCO4A1solute carrier organic anion transporter family member 4A1 [Source:HGNC Symbol;Acc:HGNC:10953]35569-2.497-0.1010No
137CX3CR1C-X3-C motif chemokine receptor 1 [Source:HGNC Symbol;Acc:HGNC:2558]36227-3.122-0.0882No
138KIF5Ckinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]36437-3.405-0.0606No
139CYTIPcytohesin 1 interacting protein [Source:HGNC Symbol;Acc:HGNC:9506]36726-3.872-0.0305No
140ANGPTL4angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]36857-4.1240.0063No
Table: GSEA details [plain text format]



Fig 2: KRAS.LUNG_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.LUNG_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.LUNG_UP.V1_UP