Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetDESCARTES_FETAL_STOMACH_MYELOID_CELLS
Enrichment Score (ES)0.60982925
Normalized Enrichment Score (NES)1.4957086
Nominal p-value0.004219409
FDR q-value0.14914435
FWER p-Value0.735
Table: GSEA Results Summary



Fig 1: Enrichment plot: DESCARTES_FETAL_STOMACH_MYELOID_CELLS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1Binterleukin 1 beta [Source:HGNC Symbol;Acc:HGNC:5992]184.9410.0651Yes
2TNFRSF1BTNF receptor superfamily member 1B [Source:HGNC Symbol;Acc:HGNC:11917]304.8880.1297Yes
3MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]664.6480.1904Yes
4CD83CD83 molecule [Source:HGNC Symbol;Acc:HGNC:1703]3273.4040.2285Yes
5CD86CD86 molecule [Source:HGNC Symbol;Acc:HGNC:1705]3563.3060.2717Yes
6HCKHCK proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:4840]3643.2900.3152Yes
7PIK3AP1phosphoinositide-3-kinase adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:30034]3843.2510.3578Yes
8NR4A3nuclear receptor subfamily 4 group A member 3 [Source:HGNC Symbol;Acc:HGNC:7982]4303.1540.3984Yes
9PTAFRplatelet activating factor receptor [Source:HGNC Symbol;Acc:HGNC:9582]7792.5030.4222Yes
10PLEKpleckstrin [Source:HGNC Symbol;Acc:HGNC:9070]7812.4970.4554Yes
11ITGAXintegrin subunit alpha X [Source:HGNC Symbol;Acc:HGNC:6152]7962.4770.4878Yes
12CD14CD14 molecule [Source:HGNC Symbol;Acc:HGNC:1628]8532.3620.5177Yes
13RILPL2Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]10202.1760.5421Yes
14ADAP2ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]15091.6780.5512Yes
15SPI1Spi-1 proto-oncogene [Source:HGNC Symbol;Acc:HGNC:11241]18541.4490.5611Yes
16FCER1GFc fragment of IgE receptor Ig [Source:HGNC Symbol;Acc:HGNC:3611]19381.3950.5774Yes
17LTV1LTV1 ribosome biogenesis factor [Source:HGNC Symbol;Acc:HGNC:21173]25611.1320.5756Yes
18ATP8B4ATPase phospholipid transporting 8B4 (putative) [Source:HGNC Symbol;Acc:HGNC:13536]25781.1260.5901Yes
19IRF8interferon regulatory factor 8 [Source:HGNC Symbol;Acc:HGNC:5358]28720.9870.5953Yes
20TBXAS1thromboxane A synthase 1 [Source:HGNC Symbol;Acc:HGNC:11609]31500.8860.5996Yes
21NCF2neutrophil cytosolic factor 2 [Source:HGNC Symbol;Acc:HGNC:7661]32190.8590.6091Yes
22C1QBcomplement C1q B chain [Source:HGNC Symbol;Acc:HGNC:1242]35600.7450.6098Yes
23GCAgrancalcin [Source:HGNC Symbol;Acc:HGNC:15990]40990.5770.6029No
24MPEG1macrophage expressed 1 [Source:HGNC Symbol;Acc:HGNC:29619]46310.4330.5944No
25PLD4phospholipase D family member 4 [Source:HGNC Symbol;Acc:HGNC:23792]52410.2790.5816No
26TRPM2transient receptor potential cation channel subfamily M member 2 [Source:HGNC Symbol;Acc:HGNC:12339]53330.2550.5825No
27HLA-DMAmajor histocompatibility complex, class II, DM alpha [Source:HGNC Symbol;Acc:HGNC:4934]55510.2070.5794No
28WDFY4WDFY family member 4 [Source:HGNC Symbol;Acc:HGNC:29323]57650.1490.5756No
29S100A8S100 calcium binding protein A8 [Source:HGNC Symbol;Acc:HGNC:10498]86560.0000.4976No
30LY86lymphocyte antigen 86 [Source:HGNC Symbol;Acc:HGNC:16837]93530.0000.4788No
31CLEC7AC-type lectin domain containing 7A [Source:HGNC Symbol;Acc:HGNC:14558]95170.0000.4743No
32MS4A7membrane spanning 4-domains A7 [Source:HGNC Symbol;Acc:HGNC:13378]111430.0000.4304No
33IFI30IFI30 lysosomal thiol reductase [Source:HGNC Symbol;Acc:HGNC:5398]115910.0000.4184No
34DNASE1L3deoxyribonuclease 1 like 3 [Source:HGNC Symbol;Acc:HGNC:2959]120170.0000.4069No
35CSF2RAcolony stimulating factor 2 receptor subunit alpha [Source:HGNC Symbol;Acc:HGNC:2435]120570.0000.4058No
36LINC00996long intergenic non-protein coding RNA 996 [Source:HGNC Symbol;Acc:HGNC:27800]122110.0000.4017No
37JAMLjunction adhesion molecule like [Source:HGNC Symbol;Acc:HGNC:19084]122410.0000.4009No
38CD4CD4 molecule [Source:HGNC Symbol;Acc:HGNC:1678]157460.0000.3063No
39HLA-DMBmajor histocompatibility complex, class II, DM beta [Source:HGNC Symbol;Acc:HGNC:4935]161770.0000.2946No
40HLA-DRAmajor histocompatibility complex, class II, DR alpha [Source:HGNC Symbol;Acc:HGNC:4947]162220.0000.2934No
41HLA-DRB6major histocompatibility complex, class II, DR beta 6 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:4954]181020.0000.2427No
42HLA-DRB5major histocompatibility complex, class II, DR beta 5 [Source:HGNC Symbol;Acc:HGNC:4953]181030.0000.2427No
43HLA-DRB1major histocompatibility complex, class II, DR beta 1 [Source:HGNC Symbol;Acc:HGNC:4948]181280.0000.2420No
44HLA-DQA1major histocompatibility complex, class II, DQ alpha 1 [Source:HGNC Symbol;Acc:HGNC:4942]184480.0000.2334No
45HLA-DQB1major histocompatibility complex, class II, DQ beta 1 [Source:HGNC Symbol;Acc:HGNC:4944]184770.0000.2327No
46HLA-DPA1major histocompatibility complex, class II, DP alpha 1 [Source:HGNC Symbol;Acc:HGNC:4938]189190.0000.2207No
47HLA-DPB1major histocompatibility complex, class II, DP beta 1 [Source:HGNC Symbol;Acc:HGNC:4940]189400.0000.2202No
48MERTKMER proto-oncogene, tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:7027]206980.0000.1727No
49CPVLcarboxypeptidase vitellogenic like [Source:HGNC Symbol;Acc:HGNC:14399]208560.0000.1685No
50CD300ACD300a molecule [Source:HGNC Symbol;Acc:HGNC:19319]210580.0000.1631No
51CD163L1CD163 molecule like 1 [Source:HGNC Symbol;Acc:HGNC:30375]211060.0000.1618No
52ADGRE2adhesion G protein-coupled receptor E2 [Source:HGNC Symbol;Acc:HGNC:3337]215210.0000.1506No
53CCDC26CCDC26 long non-coding RNA [Source:HGNC Symbol;Acc:HGNC:28416]217180.0000.1453No
54CST3cystatin C [Source:HGNC Symbol;Acc:HGNC:2475]218840.0000.1409No
55PLAURplasminogen activator, urokinase receptor [Source:HGNC Symbol;Acc:HGNC:9053]229980.0000.1108No
56MS4A4Emembrane spanning 4-domains A4E [Source:HGNC Symbol;Acc:HGNC:14284]233860.0000.1003No
57MS4A6Amembrane spanning 4-domains A6A [Source:HGNC Symbol;Acc:HGNC:13375]233980.0000.1000No
58FLT3fms related receptor tyrosine kinase 3 [Source:HGNC Symbol;Acc:HGNC:3765]242700.0000.0765No
59C1QAcomplement C1q A chain [Source:HGNC Symbol;Acc:HGNC:1241]248540.0000.0608No
60C1QCcomplement C1q C chain [Source:HGNC Symbol;Acc:HGNC:1245]248720.0000.0603No
61IDO2indoleamine 2,3-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:27269]249210.0000.0590No
62IDO1indoleamine 2,3-dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:6059]249220.0000.0590No
63CIITAclass II major histocompatibility complex transactivator [Source:HGNC Symbol;Acc:HGNC:7067]271880.000-0.0022No
64CD84CD84 molecule [Source:HGNC Symbol;Acc:HGNC:1704]281340.000-0.0277No
65MYO1Fmyosin IF [Source:HGNC Symbol;Acc:HGNC:7600]29103-0.203-0.0512No
66CYBBcytochrome b-245 beta chain [Source:HGNC Symbol;Acc:HGNC:2578]29201-0.221-0.0509No
67IGSF6immunoglobulin superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:5953]30462-0.436-0.0791No
68TYROBPtransmembrane immune signaling adaptor TYROBP [Source:HGNC Symbol;Acc:HGNC:12449]30769-0.519-0.0805No
69NFAM1NFAT activating protein with ITAM motif 1 [Source:HGNC Symbol;Acc:HGNC:29872]31720-0.799-0.0956No
70CD74CD74 molecule [Source:HGNC Symbol;Acc:HGNC:1697]32902-1.167-0.1120No
71RUBCNLrubicon like autophagy enhancer [Source:HGNC Symbol;Acc:HGNC:20420]34223-1.727-0.1247No
72FGD2FYVE, RhoGEF and PH domain containing 2 [Source:HGNC Symbol;Acc:HGNC:3664]34227-1.729-0.1019No
73NAPSBnapsin B aspartic peptidase, pseudogene [Source:HGNC Symbol;Acc:HGNC:13396]34269-1.749-0.0798No
74CSF3Rcolony stimulating factor 3 receptor [Source:HGNC Symbol;Acc:HGNC:2439]35309-2.312-0.0771No
75ALOX5arachidonate 5-lipoxygenase [Source:HGNC Symbol;Acc:HGNC:435]37003-4.591-0.0619No
76HACD43-hydroxyacyl-CoA dehydratase 4 [Source:HGNC Symbol;Acc:HGNC:20920]37059-4.8430.0008No
Table: GSEA details [plain text format]



Fig 2: DESCARTES_FETAL_STOMACH_MYELOID_CELLS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: DESCARTES_FETAL_STOMACH_MYELOID_CELLS: Random ES distribution   
Gene set null distribution of ES for DESCARTES_FETAL_STOMACH_MYELOID_CELLS