Fig 1: Enrichment plot: DESCARTES_MAIN_FETAL_STROMAL_CELLS
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #WT_GAQ_versus_WT_NA.Nof1.cls #WT_GAQ_versus_WT_NA_repos |
| Phenotype | Nof1.cls#WT_GAQ_versus_WT_NA_repos |
| Upregulated in class | WT_NA |
| GeneSet | DESCARTES_MAIN_FETAL_STROMAL_CELLS |
| Enrichment Score (ES) | -0.99762625 |
| Normalized Enrichment Score (NES) | -1.680204 |
| Nominal p-value | 0.0 |
| FDR q-value | 7.662138E-4 |
| FWER p-Value | 0.008 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | LINC01412 | long intergenic non-protein coding RNA 1412 [Source:HGNC Symbol;Acc:HGNC:50704] | 6833 | 0.000 | -0.1843 | No |
| 2 | LINC01611 | long intergenic non-protein coding RNA 1611 [Source:HGNC Symbol;Acc:HGNC:51791] | 7322 | 0.000 | -0.1975 | No |
| 3 | LINC01082 | long intergenic non-protein coding RNA 1082 [Source:HGNC Symbol;Acc:HGNC:49125] | 9122 | 0.000 | -0.2460 | No |
| 4 | RTL3 | retrotransposon Gag like 3 [Source:HGNC Symbol;Acc:HGNC:22997] | 10554 | 0.000 | -0.2846 | No |
| 5 | LINC00968 | long intergenic non-protein coding RNA 968 [Source:HGNC Symbol;Acc:HGNC:48727] | 12195 | 0.000 | -0.3288 | No |
| 6 | ITGBL1 | integrin subunit beta like 1 [Source:HGNC Symbol;Acc:HGNC:6164] | 12512 | 0.000 | -0.3374 | No |
| 7 | COL1A1 | collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197] | 12941 | 0.000 | -0.3489 | No |
| 8 | COL1A2 | collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198] | 12942 | 0.000 | -0.3489 | No |
| 9 | MXRA5 | matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539] | 13143 | 0.000 | -0.3543 | No |
| 10 | CBLN4 | cerebellin 4 precursor [Source:HGNC Symbol;Acc:HGNC:16231] | 13434 | 0.000 | -0.3621 | No |
| 11 | KERA | keratocan [Source:HGNC Symbol;Acc:HGNC:6309] | 18519 | 0.000 | -0.4993 | No |
| 12 | HSD3BP5 | hydroxy-delta-5-steroid dehydrogenase, 3 beta, pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:5223] | 18705 | 0.000 | -0.5043 | No |
| 13 | COL6A6 | collagen type VI alpha 6 chain [Source:HGNC Symbol;Acc:HGNC:27023] | 18792 | 0.000 | -0.5066 | No |
| 14 | MIR1245A | microRNA 1245a [Source:HGNC Symbol;Acc:HGNC:35311] | 18922 | 0.000 | -0.5101 | No |
| 15 | MEOX2 | mesenchyme homeobox 2 [Source:HGNC Symbol;Acc:HGNC:7014] | 20382 | 0.000 | -0.5494 | No |
| 16 | COL5A1 | collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209] | 25106 | 0.000 | -0.6768 | No |
| 17 | COL12A1 | collagen type XII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2188] | 25123 | 0.000 | -0.6772 | No |
| 18 | THBS2 | thrombospondin 2 [Source:HGNC Symbol;Acc:HGNC:11786] | 27760 | 0.000 | -0.7484 | Yes |
| 19 | PI16 | peptidase inhibitor 16 [Source:HGNC Symbol;Acc:HGNC:21245] | 37002 | -4.579 | 0.0024 | Yes |
