Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetTRAVAGLINI_LUNG_MUCOUS_CELL
Enrichment Score (ES)0.6162425
Normalized Enrichment Score (NES)1.5982995
Nominal p-value0.0
FDR q-value0.07933294
FWER p-Value0.379
Table: GSEA Results Summary



Fig 1: Enrichment plot: TRAVAGLINI_LUNG_MUCOUS_CELL   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CSF3colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]114.9730.0413Yes
2SAA1serum amyloid A1 [Source:HGNC Symbol;Acc:HGNC:10513]224.9350.0823Yes
3LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]334.8830.1228Yes
4DUSP5dual specificity phosphatase 5 [Source:HGNC Symbol;Acc:HGNC:3071]464.8130.1627Yes
5TIMP1TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]834.5780.2000Yes
6CPDcarboxypeptidase D [Source:HGNC Symbol;Acc:HGNC:2301]1404.2430.2340Yes
7CFBcomplement factor B [Source:HGNC Symbol;Acc:HGNC:1037]1963.9250.2653Yes
8TGM2transglutaminase 2 [Source:HGNC Symbol;Acc:HGNC:11778]2643.6030.2936Yes
9PLK2polo like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19699]2853.5440.3227Yes
10MDKmidkine [Source:HGNC Symbol;Acc:HGNC:6972]3573.3050.3484Yes
11ANPEPalanyl aminopeptidase, membrane [Source:HGNC Symbol;Acc:HGNC:500]5102.9910.3693Yes
12ASS1argininosuccinate synthase 1 [Source:HGNC Symbol;Acc:HGNC:758]5162.9770.3941Yes
13SOD2superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180]6352.7630.4140Yes
14CXCL10C-X-C motif chemokine ligand 10 [Source:HGNC Symbol;Acc:HGNC:10637]7022.6350.4342Yes
15CPceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]7772.5070.4532Yes
16LYNLYN proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6735]7992.4720.4733Yes
17PTGESprostaglandin E synthase [Source:HGNC Symbol;Acc:HGNC:9599]9212.2520.4888Yes
18CTSCcathepsin C [Source:HGNC Symbol;Acc:HGNC:2528]9852.2300.5058Yes
19TNFAIP2TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]9882.2220.5243Yes
20IRAK3interleukin 1 receptor associated kinase 3 [Source:HGNC Symbol;Acc:HGNC:17020]14991.6840.5246Yes
21PDZK1IP1PDZK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16887]15891.6200.5357Yes
22ST3GAL1ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10862]16301.5860.5479Yes
23RDH10retinol dehydrogenase 10 [Source:HGNC Symbol;Acc:HGNC:19975]19051.4220.5524Yes
24REEP3receptor accessory protein 3 [Source:HGNC Symbol;Acc:HGNC:23711]19331.4020.5633Yes
25C3complement C3 [Source:HGNC Symbol;Acc:HGNC:1318]19491.3910.5746Yes
26DUSP23dual specificity phosphatase 23 [Source:HGNC Symbol;Acc:HGNC:21480]19811.3760.5852Yes
27IFITM1interferon induced transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:5412]20401.3760.5952Yes
28TNIP3TNFAIP3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:19315]25221.1530.5918Yes
29MED24mediator complex subunit 24 [Source:HGNC Symbol;Acc:HGNC:22963]25331.1480.6011Yes
30CLUclusterin [Source:HGNC Symbol;Acc:HGNC:2095]28001.0230.6025Yes
31C15orf48chromosome 15 open reading frame 48 [Source:HGNC Symbol;Acc:HGNC:29898]28011.0220.6110Yes
32IL6interleukin 6 [Source:HGNC Symbol;Acc:HGNC:6018]29100.9740.6162Yes
33SAT1spermidine/spermine N1-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10540]36190.7200.6031No
34TMEM165transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]38840.6470.6014No
35KDRkinase insert domain receptor [Source:HGNC Symbol;Acc:HGNC:6307]49870.3440.5744No
36CSTBcystatin B [Source:HGNC Symbol;Acc:HGNC:2482]50580.3220.5752No
37CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]64440.0000.5378No
38MUCL1mucin like 1 [Source:HGNC Symbol;Acc:HGNC:30588]65400.0000.5352No
39DEFB4Adefensin beta 4A [Source:HGNC Symbol;Acc:HGNC:2767]72520.0000.5160No
40WFDC2WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]82470.0000.4891No
41PROM1prominin 1 [Source:HGNC Symbol;Acc:HGNC:9454]83650.0000.4859No
42S100A9S100 calcium binding protein A9 [Source:HGNC Symbol;Acc:HGNC:10499]86530.0000.4781No
43CRISP3cysteine rich secretory protein 3 [Source:HGNC Symbol;Acc:HGNC:16904]92310.0000.4625No
44LY6Elymphocyte antigen 6 family member E [Source:HGNC Symbol;Acc:HGNC:6727]93360.0000.4597No
45GPX3glutathione peroxidase 3 [Source:HGNC Symbol;Acc:HGNC:4555]95300.0000.4545No
46ADAM28ADAM metallopeptidase domain 28 [Source:HGNC Symbol;Acc:HGNC:206]97710.0000.4480No
47HS3ST1heparan sulfate-glucosamine 3-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5194]100640.0000.4401No
48CYP2F1cytochrome P450 family 2 subfamily F member 1 [Source:HGNC Symbol;Acc:HGNC:2632]104340.0000.4301No
49KLK10kallikrein related peptidase 10 [Source:HGNC Symbol;Acc:HGNC:6358]105390.0000.4273No
50KLK11kallikrein related peptidase 11 [Source:HGNC Symbol;Acc:HGNC:6359]105400.0000.4273No
51KLK12kallikrein related peptidase 12 [Source:HGNC Symbol;Acc:HGNC:6360]105410.0000.4273No
52CX3CL1C-X3-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:10647]108190.0000.4198No
53LCN2lipocalin 2 [Source:HGNC Symbol;Acc:HGNC:6526]110090.0000.4147No
54SLC26A4solute carrier family 26 member 4 [Source:HGNC Symbol;Acc:HGNC:8818]112550.0000.4081No
55TSPAN8tetraspanin 8 [Source:HGNC Symbol;Acc:HGNC:11855]116100.0000.3985No
56AKR1C1aldo-keto reductase family 1 member C1 [Source:HGNC Symbol;Acc:HGNC:384]116510.0000.3974No
57AKR1C2aldo-keto reductase family 1 member C2 [Source:HGNC Symbol;Acc:HGNC:385]116530.0000.3974No
58S100PS100 calcium binding protein P [Source:HGNC Symbol;Acc:HGNC:10504]117630.0000.3944No
59BACE2beta-secretase 2 [Source:HGNC Symbol;Acc:HGNC:934]118300.0000.3927No
60IGFBP3insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]118810.0000.3913No
61ATP12AATPase H+/K+ transporting non-gastric alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:13816]122310.0000.3819No
62MSMBmicroseminoprotein beta [Source:HGNC Symbol;Acc:HGNC:7372]124410.0000.3762No
63TNFSF10TNF superfamily member 10 [Source:HGNC Symbol;Acc:HGNC:11925]124800.0000.3752No
64VMO1vitelline membrane outer layer 1 homolog [Source:HGNC Symbol;Acc:HGNC:30387]125280.0000.3739No
65UBDubiquitin D [Source:HGNC Symbol;Acc:HGNC:18795]128480.0000.3653No
66MUC4mucin 4, cell surface associated [Source:HGNC Symbol;Acc:HGNC:7514]128750.0000.3646No
67LINC00342long intergenic non-protein coding RNA 342 [Source:HGNC Symbol;Acc:HGNC:42470]130710.0000.3593No
68ZG16Bzymogen granule protein 16B [Source:HGNC Symbol;Acc:HGNC:30456]133480.0000.3518No
69RASD1ras related dexamethasone induced 1 [Source:HGNC Symbol;Acc:HGNC:15828]144530.0000.3220No
70TMC5transmembrane channel like 5 [Source:HGNC Symbol;Acc:HGNC:22999]145190.0000.3202No
71TMEM45Atransmembrane protein 45A [Source:HGNC Symbol;Acc:HGNC:25480]148740.0000.3106No
72CDC42EP5CDC42 effector protein 5 [Source:HGNC Symbol;Acc:HGNC:17408]161620.0000.2758No
73BPIFA1BPI fold containing family A member 1 [Source:HGNC Symbol;Acc:HGNC:15749]176170.0000.2365No
74BPIFB1BPI fold containing family B member 1 [Source:HGNC Symbol;Acc:HGNC:16108]176680.0000.2351No
75SERPINA3serpin family A member 3 [Source:HGNC Symbol;Acc:HGNC:16]178220.0000.2310No
76ANKRD36Cankyrin repeat domain 36C [Source:HGNC Symbol;Acc:HGNC:32946]178750.0000.2296No
77HILPDAhypoxia inducible lipid droplet associated [Source:HGNC Symbol;Acc:HGNC:28859]179280.0000.2282No
78HLA-DQA2major histocompatibility complex, class II, DQ alpha 2 [Source:HGNC Symbol;Acc:HGNC:4943]184470.0000.2142No
79HLA-DQA1major histocompatibility complex, class II, DQ alpha 1 [Source:HGNC Symbol;Acc:HGNC:4942]184480.0000.2142No
80LTFlactotransferrin [Source:HGNC Symbol;Acc:HGNC:6720]188000.0000.2047No
81MMP7matrix metallopeptidase 7 [Source:HGNC Symbol;Acc:HGNC:7174]191720.0000.1946No
82CXCL6C-X-C motif chemokine ligand 6 [Source:HGNC Symbol;Acc:HGNC:10643]195240.0000.1851No
83CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]195280.0000.1851No
84CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]195370.0000.1848No
85CXCL3C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]195390.0000.1848No
86SMIM31small integral membrane protein 31 [Source:HGNC Symbol;Acc:HGNC:49638]197960.0000.1779No
87HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]198620.0000.1761No
88PI3peptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:8947]201020.0000.1697No
89SCGB3A1secretoglobin family 3A member 1 [Source:HGNC Symbol;Acc:HGNC:18384]206350.0000.1553No
90SCGB1A1secretoglobin family 1A member 1 [Source:HGNC Symbol;Acc:HGNC:12523]213550.0000.1358No
91RARRES1retinoic acid receptor responder 1 [Source:HGNC Symbol;Acc:HGNC:9867]214980.0000.1320No
92CRYMcrystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]215720.0000.1300No
93MUC5Bmucin 5B, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7516]215800.0000.1298No
94SAA2serum amyloid A2 [Source:HGNC Symbol;Acc:HGNC:10514]218950.0000.1213No
95TFPI2tissue factor pathway inhibitor 2 [Source:HGNC Symbol;Acc:HGNC:11761]221470.0000.1145No
96SLPIsecretory leukocyte peptidase inhibitor [Source:HGNC Symbol;Acc:HGNC:11092]224430.0000.1066No
97SLC4A4solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]226410.0000.1012No
98RIMS1regulating synaptic membrane exocytosis 1 [Source:HGNC Symbol;Acc:HGNC:17282]227190.0000.0991No
99ALDH1A3aldehyde dehydrogenase 1 family member A3 [Source:HGNC Symbol;Acc:HGNC:409]230010.0000.0915No
100SLC5A5solute carrier family 5 member 5 [Source:HGNC Symbol;Acc:HGNC:11040]230500.0000.0902No
101AZGP1alpha-2-glycoprotein 1, zinc-binding [Source:HGNC Symbol;Acc:HGNC:910]240640.0000.0628No
102FCGBPFc fragment of IgG binding protein [Source:HGNC Symbol;Acc:HGNC:13572]241330.0000.0610No
103IDO1indoleamine 2,3-dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:6059]249220.0000.0397No
104TFF3trefoil factor 3 [Source:HGNC Symbol;Acc:HGNC:11757]254510.0000.0254No
105KYNUkynureninase [Source:HGNC Symbol;Acc:HGNC:6469]270270.000-0.0172No
106PIGRpolymeric immunoglobulin receptor [Source:HGNC Symbol;Acc:HGNC:8968]278030.000-0.0382No
107CCL2C-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:10618]279610.000-0.0424No
108XBP1X-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:12801]29189-0.218-0.0738No
109SRD5A3steroid 5 alpha-reductase 3 [Source:HGNC Symbol;Acc:HGNC:25812]29266-0.234-0.0739No
110RPS26ribosomal protein S26 [Source:HGNC Symbol;Acc:HGNC:10414]30513-0.451-0.1038No
111CTSBcathepsin B [Source:HGNC Symbol;Acc:HGNC:2527]31379-0.697-0.1214No
112HIPK2homeodomain interacting protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14402]32006-0.875-0.1310No
113LAG3lymphocyte activating 3 [Source:HGNC Symbol;Acc:HGNC:6476]32129-0.915-0.1267No
114STT3BSTT3 oligosaccharyltransferase complex catalytic subunit B [Source:HGNC Symbol;Acc:HGNC:30611]33088-1.237-0.1422No
115SLC26A2solute carrier family 26 member 2 [Source:HGNC Symbol;Acc:HGNC:10994]33608-1.439-0.1442No
116INSRinsulin receptor [Source:HGNC Symbol;Acc:HGNC:6091]34255-1.744-0.1471No
117RHOVras homolog family member V [Source:HGNC Symbol;Acc:HGNC:18313]34595-1.945-0.1400No
118BIDBH3 interacting domain death agonist [Source:HGNC Symbol;Acc:HGNC:1050]34997-2.100-0.1333No
119ERO1Aendoplasmic reticulum oxidoreductase 1 alpha [Source:HGNC Symbol;Acc:HGNC:13280]35325-2.321-0.1228No
120PTP4A3protein tyrosine phosphatase 4A3 [Source:HGNC Symbol;Acc:HGNC:9636]35596-2.521-0.1090No
121ADMadrenomedullin [Source:HGNC Symbol;Acc:HGNC:259]36193-3.089-0.0993No
122SORDsorbitol dehydrogenase [Source:HGNC Symbol;Acc:HGNC:11184]36422-3.377-0.0772No
123SLC9A3R2SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]36576-3.595-0.0513No
124CBR3carbonyl reductase 3 [Source:HGNC Symbol;Acc:HGNC:1549]36694-3.808-0.0226No
125SERPINF1serpin family F member 1 [Source:HGNC Symbol;Acc:HGNC:8824]36790-3.9870.0081No
Table: GSEA details [plain text format]



Fig 2: TRAVAGLINI_LUNG_MUCOUS_CELL   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: TRAVAGLINI_LUNG_MUCOUS_CELL: Random ES distribution   
Gene set null distribution of ES for TRAVAGLINI_LUNG_MUCOUS_CELL