Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetZHONG_PFC_C2_UNKNOWN_NPC
Enrichment Score (ES)-0.80424833
Normalized Enrichment Score (NES)-1.6693239
Nominal p-value0.0
FDR q-value0.0011555783
FWER p-Value0.015
Table: GSEA Results Summary



Fig 1: Enrichment plot: ZHONG_PFC_C2_UNKNOWN_NPC   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]35380.752-0.0888No
2KDM4Alysine demethylase 4A [Source:HGNC Symbol;Acc:HGNC:22978]40700.585-0.0978No
3CNOT7CCR4-NOT transcription complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:14101]52050.285-0.1258No
4TUBB6tubulin beta 6 class V [Source:HGNC Symbol;Acc:HGNC:20776]62340.036-0.1533No
5CALB2calbindin 2 [Source:HGNC Symbol;Acc:HGNC:1435]88760.000-0.2246No
6AC091057.1OTU deubiquitinase 7A pseudogene [Source:NCBI gene (formerly Entrezgene);Acc:100288637]128620.000-0.3323No
7NDST4N-deacetylase and N-sulfotransferase 4 [Source:HGNC Symbol;Acc:HGNC:20779]135870.000-0.3519No
8DNALI1dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]178980.000-0.4683No
9AMBNameloblastin [Source:HGNC Symbol;Acc:HGNC:452]217360.000-0.5720No
10MFAP2microfibril associated protein 2 [Source:HGNC Symbol;Acc:HGNC:7033]228160.000-0.6011No
11ZNF649zinc finger protein 649 [Source:HGNC Symbol;Acc:HGNC:25741]263650.000-0.6970No
12PTTG1PTTG1 regulator of sister chromatid separation, securin [Source:HGNC Symbol;Acc:HGNC:9690]28881-0.144-0.7636No
13TUBB4Btubulin beta 4B class IVb [Source:HGNC Symbol;Acc:HGNC:20771]28890-0.146-0.7625No
14TROAPtrophinin associated protein [Source:HGNC Symbol;Acc:HGNC:12327]29255-0.232-0.7702No
15PIF1PIF1 5'-to-3' DNA helicase [Source:HGNC Symbol;Acc:HGNC:26220]29274-0.237-0.7686No
16KIF20Akinesin family member 20A [Source:HGNC Symbol;Acc:HGNC:9787]29461-0.290-0.7709No
17HJURPHolliday junction recognition protein [Source:HGNC Symbol;Acc:HGNC:25444]29943-0.320-0.7810No
18CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]30121-0.351-0.7826No
19CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]30420-0.426-0.7868No
20KPNA2karyopherin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6395]30483-0.442-0.7845No
21TRIM59tripartite motif containing 59 [Source:HGNC Symbol;Acc:HGNC:30834]30924-0.566-0.7912No
22ITCHitchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13890]30967-0.580-0.7871No
23TACC3transforming acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:HGNC:11524]31154-0.630-0.7864No
24AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]31203-0.642-0.7819No
25RANGAP1Ran GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9854]32032-0.884-0.7962Yes
26ARL6IP1ADP ribosylation factor like GTPase 6 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:697]32155-0.923-0.7911Yes
27REEP4receptor accessory protein 4 [Source:HGNC Symbol;Acc:HGNC:26176]32255-0.955-0.7851Yes
28LDHAlactate dehydrogenase A [Source:HGNC Symbol;Acc:HGNC:6535]32546-1.031-0.7836Yes
29UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]32593-1.049-0.7753Yes
30PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]32612-1.058-0.7662Yes
31TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]32628-1.064-0.7570Yes
32NDE1nudE neurodevelopment protein 1 [Source:HGNC Symbol;Acc:HGNC:17619]32804-1.133-0.7514Yes
33TUBA1Ctubulin alpha 1c [Source:HGNC Symbol;Acc:HGNC:20768]32929-1.175-0.7441Yes
34ARHGAP11ARho GTPase activating protein 11A [Source:HGNC Symbol;Acc:HGNC:15783]33037-1.217-0.7359Yes
35KIF22kinesin family member 22 [Source:HGNC Symbol;Acc:HGNC:6391]33664-1.454-0.7397Yes
36CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]33668-1.457-0.7265Yes
37CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]33695-1.469-0.7139Yes
38KIF4Akinesin family member 4A [Source:HGNC Symbol;Acc:HGNC:13339]33702-1.472-0.7007Yes
39FAM83Dfamily with sequence similarity 83 member D [Source:HGNC Symbol;Acc:HGNC:16122]33707-1.475-0.6874Yes
40CITcitron rho-interacting serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1985]33760-1.501-0.6752Yes
41SPAG5sperm associated antigen 5 [Source:HGNC Symbol;Acc:HGNC:13452]33926-1.576-0.6653Yes
42CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]34050-1.644-0.6537Yes
43DEPDC1DEP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22949]34054-1.648-0.6388Yes
44MIS18BP1MIS18 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:20190]34154-1.697-0.6261Yes
45CKAP2Lcytoskeleton associated protein 2 like [Source:HGNC Symbol;Acc:HGNC:26877]34157-1.698-0.6108Yes
46G2E3G2/M-phase specific E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:20338]34193-1.716-0.5961Yes
47CEP70centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]34412-1.831-0.5854Yes
48CDCA3cell division cycle associated 3 [Source:HGNC Symbol;Acc:HGNC:14624]34458-1.861-0.5697Yes
49CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]34479-1.876-0.5532Yes
50RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]34869-2.020-0.5454Yes
51GTSE1G2 and S-phase expressed 1 [Source:HGNC Symbol;Acc:HGNC:13698]34979-2.090-0.5294Yes
52KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]35003-2.106-0.5109Yes
53TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35009-2.109-0.4919Yes
54NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]35034-2.123-0.4732Yes
55CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]35057-2.142-0.4544Yes
56DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35073-2.150-0.4353Yes
57AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]35118-2.180-0.4167Yes
58NEK2NIMA related kinase 2 [Source:HGNC Symbol;Acc:HGNC:7745]35145-2.200-0.3974Yes
59TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]35199-2.244-0.3785Yes
60NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]35206-2.250-0.3582Yes
61CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]35334-2.329-0.3405Yes
62SPDL1spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]35350-2.341-0.3197Yes
63DCXRdicarbonyl and L-xylulose reductase [Source:HGNC Symbol;Acc:HGNC:18985]35399-2.377-0.2994Yes
64NCAPD2non-SMC condensin I complex subunit D2 [Source:HGNC Symbol;Acc:HGNC:24305]35551-2.485-0.2809Yes
65MZT1mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]35627-2.547-0.2598Yes
66PHF19PHD finger protein 19 [Source:HGNC Symbol;Acc:HGNC:24566]35648-2.571-0.2370Yes
67CDCA2cell division cycle associated 2 [Source:HGNC Symbol;Acc:HGNC:14623]35655-2.574-0.2138Yes
68KNSTRNkinetochore localized astrin (SPAG5) binding protein [Source:HGNC Symbol;Acc:HGNC:30767]35692-2.606-0.1911Yes
69OIP5Opa interacting protein 5 [Source:HGNC Symbol;Acc:HGNC:20300]35902-2.735-0.1719Yes
70ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36035-2.919-0.1490Yes
71MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36044-2.930-0.1226Yes
72PRR11proline rich 11 [Source:HGNC Symbol;Acc:HGNC:25619]36077-2.964-0.0966Yes
73CDC25Bcell division cycle 25B [Source:HGNC Symbol;Acc:HGNC:1726]36189-3.084-0.0716Yes
74NEIL3nei like DNA glycosylase 3 [Source:HGNC Symbol;Acc:HGNC:24573]36237-3.134-0.0444Yes
75SGO2shugoshin 2 [Source:HGNC Symbol;Acc:HGNC:30812]36374-3.300-0.0181Yes
76PSRC1proline and serine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:24472]36859-4.1240.0062Yes
Table: GSEA details [plain text format]



Fig 2: ZHONG_PFC_C2_UNKNOWN_NPC   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ZHONG_PFC_C2_UNKNOWN_NPC: Random ES distribution   
Gene set null distribution of ES for ZHONG_PFC_C2_UNKNOWN_NPC