Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetHALLMARK_COAGULATION
Enrichment Score (ES)0.48377585
Normalized Enrichment Score (NES)1.2597208
Nominal p-value0.027586207
FDR q-value0.101215966
FWER p-Value0.33
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_COAGULATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SERPINB2serpin family B member 2 [Source:HGNC Symbol;Acc:HGNC:8584]544.7500.0352Yes
2MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]664.6480.0707Yes
3TIMP1TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]834.5780.1056Yes
4PDGFBplatelet derived growth factor subunit B [Source:HGNC Symbol;Acc:HGNC:8800]1044.4590.1394Yes
5FURINfurin, paired basic amino acid cleaving enzyme [Source:HGNC Symbol;Acc:HGNC:8568]1364.2830.1716Yes
6CFBcomplement factor B [Source:HGNC Symbol;Acc:HGNC:1037]1963.9250.2003Yes
7MMP14matrix metallopeptidase 14 [Source:HGNC Symbol;Acc:HGNC:7160]2293.8100.2288Yes
8SERPINE1serpin family E member 1 [Source:HGNC Symbol;Acc:HGNC:8583]2393.7640.2576Yes
9MSRB2methionine sulfoxide reductase B2 [Source:HGNC Symbol;Acc:HGNC:17061]2833.5510.2838Yes
10FBN1fibrillin 1 [Source:HGNC Symbol;Acc:HGNC:3603]3173.4080.3092Yes
11SERPINC1serpin family C member 1 [Source:HGNC Symbol;Acc:HGNC:775]4133.1870.3312Yes
12GNG12G protein subunit gamma 12 [Source:HGNC Symbol;Acc:HGNC:19663]6502.7380.3459Yes
13PLEKpleckstrin [Source:HGNC Symbol;Acc:HGNC:9070]7812.4970.3617Yes
14WDR1WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]11532.0060.3671Yes
15MAFFMAF bZIP transcription factor F [Source:HGNC Symbol;Acc:HGNC:6780]12441.9080.3794Yes
16MMP2matrix metallopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:7166]12581.8930.3936Yes
17THBS1thrombospondin 1 [Source:HGNC Symbol;Acc:HGNC:11785]13601.8100.4048Yes
18CD9CD9 molecule [Source:HGNC Symbol;Acc:HGNC:1709]14911.6920.4144Yes
19CTSHcathepsin H [Source:HGNC Symbol;Acc:HGNC:2535]15381.6590.4259Yes
20C3complement C3 [Source:HGNC Symbol;Acc:HGNC:1318]19491.3910.4256Yes
21F9coagulation factor IX [Source:HGNC Symbol;Acc:HGNC:3551]22551.3070.4274Yes
22MST1macrophage stimulating 1 [Source:HGNC Symbol;Acc:HGNC:7380]22821.2860.4366Yes
23CTSVcathepsin V [Source:HGNC Symbol;Acc:HGNC:2538]25161.1600.4392Yes
24F3coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]26821.0740.4430Yes
25PROS1protein S [Source:HGNC Symbol;Acc:HGNC:9456]27371.0530.4497Yes
26CLUclusterin [Source:HGNC Symbol;Acc:HGNC:2095]28001.0230.4559Yes
27ANXA1annexin A1 [Source:HGNC Symbol;Acc:HGNC:533]29050.9750.4606Yes
28RABIFRAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]31790.8760.4600Yes
29ADAM9ADAM metallopeptidase domain 9 [Source:HGNC Symbol;Acc:HGNC:216]32100.8630.4658Yes
30F10coagulation factor X [Source:HGNC Symbol;Acc:HGNC:3528]32420.8540.4716Yes
31F8coagulation factor VIII [Source:HGNC Symbol;Acc:HGNC:3546]36820.6930.4650Yes
32CRIP2cysteine rich protein 2 [Source:HGNC Symbol;Acc:HGNC:2361]37080.6890.4697Yes
33GNB2G protein subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:4398]37800.6860.4730Yes
34FYNFYN proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:4037]37830.6850.4783Yes
35CTSKcathepsin K [Source:HGNC Symbol;Acc:HGNC:2536]37870.6840.4835Yes
36ITGB3integrin subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:6156]39540.6230.4838Yes
37RAC1Rac family small GTPase 1 [Source:HGNC Symbol;Acc:HGNC:9801]42760.5240.4791No
38PREPprolyl endopeptidase [Source:HGNC Symbol;Acc:HGNC:9358]43380.5130.4814No
39CPN1carboxypeptidase N subunit 1 [Source:HGNC Symbol;Acc:HGNC:2312]48690.3770.4700No
40FN1fibronectin 1 [Source:HGNC Symbol;Acc:HGNC:3778]51770.2910.4639No
41ARF4ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]52890.2680.4630No
42RAPGEF3Rap guanine nucleotide exchange factor 3 [Source:HGNC Symbol;Acc:HGNC:16629]67200.0000.4243No
43PLATplasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]99760.0000.3362No
44APOA1apolipoprotein A1 [Source:HGNC Symbol;Acc:HGNC:600]101970.0000.3303No
45APOC3apolipoprotein C3 [Source:HGNC Symbol;Acc:HGNC:610]102130.0000.3299No
46APOC2apolipoprotein C2 [Source:HGNC Symbol;Acc:HGNC:609]102150.0000.3298No
47APOC1apolipoprotein C1 [Source:HGNC Symbol;Acc:HGNC:607]102160.0000.3298No
48F13Bcoagulation factor XIII B chain [Source:HGNC Symbol;Acc:HGNC:3534]109500.0000.3100No
49KLKB1kallikrein B1 [Source:HGNC Symbol;Acc:HGNC:6371]112240.0000.3026No
50TMPRSS6transmembrane serine protease 6 [Source:HGNC Symbol;Acc:HGNC:16517]116400.0000.2914No
51PROZprotein Z, vitamin K dependent plasma glycoprotein [Source:HGNC Symbol;Acc:HGNC:9460]116870.0000.2901No
52PROCprotein C, inactivator of coagulation factors Va and VIIIa [Source:HGNC Symbol;Acc:HGNC:9451]117050.0000.2897No
53THBDthrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784]127370.0000.2618No
54P2RY1purinergic receptor P2Y1 [Source:HGNC Symbol;Acc:HGNC:8539]142060.0000.2220No
55MBL2mannose binding lectin 2 [Source:HGNC Symbol;Acc:HGNC:6922]155970.0000.1844No
56C8Bcomplement C8 beta chain [Source:HGNC Symbol;Acc:HGNC:1353]156670.0000.1826No
57C8Acomplement C8 alpha chain [Source:HGNC Symbol;Acc:HGNC:1352]156680.0000.1826No
58C8Gcomplement C8 gamma chain [Source:HGNC Symbol;Acc:HGNC:1354]156700.0000.1825No
59HTRA1HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476]156940.0000.1819No
60CFDcomplement factor D [Source:HGNC Symbol;Acc:HGNC:2771]157710.0000.1799No
61CFIcomplement factor I [Source:HGNC Symbol;Acc:HGNC:5394]157720.0000.1799No
62DCTdopachrome tautomerase [Source:HGNC Symbol;Acc:HGNC:2709]160310.0000.1729No
63C2complement C2 [Source:HGNC Symbol;Acc:HGNC:1248]161070.0000.1709No
64C9complement C9 [Source:HGNC Symbol;Acc:HGNC:1358]161120.0000.1707No
65F2coagulation factor II, thrombin [Source:HGNC Symbol;Acc:HGNC:3535]161560.0000.1696No
66F12coagulation factor XII [Source:HGNC Symbol;Acc:HGNC:3530]164630.0000.1613No
67F11coagulation factor XI [Source:HGNC Symbol;Acc:HGNC:3529]164640.0000.1613No
68FGAfibrinogen alpha chain [Source:HGNC Symbol;Acc:HGNC:3661]167000.0000.1549No
69FGGfibrinogen gamma chain [Source:HGNC Symbol;Acc:HGNC:3694]167010.0000.1549No
70OLR1oxidized low density lipoprotein receptor 1 [Source:HGNC Symbol;Acc:HGNC:8133]167560.0000.1535No
71GP9glycoprotein IX platelet [Source:HGNC Symbol;Acc:HGNC:4444]171500.0000.1428No
72TIMP3TIMP metallopeptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:11822]171580.0000.1427No
73HRGhistidine rich glycoprotein [Source:HGNC Symbol;Acc:HGNC:5181]175090.0000.1332No
74HNF4Ahepatocyte nuclear factor 4 alpha [Source:HGNC Symbol;Acc:HGNC:5024]176900.0000.1283No
75SERPING1serpin family G member 1 [Source:HGNC Symbol;Acc:HGNC:1228]178120.0000.1250No
76SERPINA1serpin family A member 1 [Source:HGNC Symbol;Acc:HGNC:8941]178240.0000.1247No
77DPP4dipeptidyl peptidase 4 [Source:HGNC Symbol;Acc:HGNC:3009]179840.0000.1204No
78BMP1bone morphogenetic protein 1 [Source:HGNC Symbol;Acc:HGNC:1067]191490.0000.0889No
79MMP7matrix metallopeptidase 7 [Source:HGNC Symbol;Acc:HGNC:7174]191720.0000.0883No
80MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]191750.0000.0883No
81MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]191790.0000.0882No
82MMP8matrix metallopeptidase 8 [Source:HGNC Symbol;Acc:HGNC:7175]191850.0000.0881No
83PF4platelet factor 4 [Source:HGNC Symbol;Acc:HGNC:8861]200840.0000.0638No
84ACOX2acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]201360.0000.0624No
85MEP1Ameprin A subunit alpha [Source:HGNC Symbol;Acc:HGNC:7015]203240.0000.0573No
86GP1BAglycoprotein Ib platelet subunit alpha [Source:HGNC Symbol;Acc:HGNC:4439]203880.0000.0556No
87CPB2carboxypeptidase B2 [Source:HGNC Symbol;Acc:HGNC:2300]205860.0000.0503No
88TFPI2tissue factor pathway inhibitor 2 [Source:HGNC Symbol;Acc:HGNC:11761]221470.0000.0081No
89PRSS23serine protease 23 [Source:HGNC Symbol;Acc:HGNC:14370]224290.0000.0005No
90ITGA2integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]237910.000-0.0364No
91ITIH1inter-alpha-trypsin inhibitor heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:6166]243120.000-0.0504No
92A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]243780.000-0.0522No
93HMGCS23-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]247630.000-0.0626No
94PLGplasminogen [Source:HGNC Symbol;Acc:HGNC:9071]247970.000-0.0635No
95C1QAcomplement C1q A chain [Source:HGNC Symbol;Acc:HGNC:1241]248540.000-0.0650No
96LEFTY2left-right determination factor 2 [Source:HGNC Symbol;Acc:HGNC:3122]249750.000-0.0682No
97RGNregucalcin [Source:HGNC Symbol;Acc:HGNC:9989]252770.000-0.0764No
98KLK8kallikrein related peptidase 8 [Source:HGNC Symbol;Acc:HGNC:6369]254250.000-0.0804No
99MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]256580.000-0.0866No
100MMP11matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]256620.000-0.0867No
101MMP15matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]256670.000-0.0868No
102F2RL2coagulation factor II thrombin receptor like 2 [Source:HGNC Symbol;Acc:HGNC:3539]261140.000-0.0989No
103SPARCsecreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]282050.000-0.1554No
104GDAguanine deaminase [Source:HGNC Symbol;Acc:HGNC:4212]28395-0.010-0.1605No
105PEF1penta-EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30009]29038-0.186-0.1764No
106MASP2mannan binding lectin serine peptidase 2 [Source:HGNC Symbol;Acc:HGNC:6902]29301-0.242-0.1816No
107S100A13S100 calcium binding protein A13 [Source:HGNC Symbol;Acc:HGNC:10490]29403-0.271-0.1823No
108COMPcartilage oligomeric matrix protein [Source:HGNC Symbol;Acc:HGNC:2227]29663-0.320-0.1868No
109LAMP2lysosomal associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:6501]30116-0.350-0.1964No
110KLF7Kruppel like factor 7 [Source:HGNC Symbol;Acc:HGNC:6350]30360-0.408-0.1998No
111SH2B2SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]30386-0.415-0.1973No
112HPNhepsin [Source:HGNC Symbol;Acc:HGNC:5155]30488-0.443-0.1966No
113CASP9caspase 9 [Source:HGNC Symbol;Acc:HGNC:1511]30909-0.560-0.2036No
114ISCUiron-sulfur cluster assembly enzyme [Source:HGNC Symbol;Acc:HGNC:29882]31166-0.632-0.2057No
115CTSBcathepsin B [Source:HGNC Symbol;Acc:HGNC:2527]31379-0.697-0.2060No
116CTSOcathepsin O [Source:HGNC Symbol;Acc:HGNC:2542]32330-0.979-0.2242No
117USP11ubiquitin specific peptidase 11 [Source:HGNC Symbol;Acc:HGNC:12609]32452-1.018-0.2196No
118DUSP14dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]32525-1.025-0.2137No
119CAPN2calpain 2 [Source:HGNC Symbol;Acc:HGNC:1479]32773-1.120-0.2117No
120SIRT2sirtuin 2 [Source:HGNC Symbol;Acc:HGNC:10886]32800-1.132-0.2037No
121LTA4Hleukotriene A4 hydrolase [Source:HGNC Symbol;Acc:HGNC:6710]33105-1.246-0.2023No
122C1Rcomplement C1r [Source:HGNC Symbol;Acc:HGNC:1246]33685-1.466-0.2067No
123CTSEcathepsin E [Source:HGNC Symbol;Acc:HGNC:2530]33965-1.599-0.2019No
124C1Scomplement C1s [Source:HGNC Symbol;Acc:HGNC:1247]33995-1.617-0.1902No
125LRP1LDL receptor related protein 1 [Source:HGNC Symbol;Acc:HGNC:6692]34126-1.684-0.1807No
126DUSP6dual specificity phosphatase 6 [Source:HGNC Symbol;Acc:HGNC:3072]34160-1.700-0.1685No
127CSRP1cysteine and glycine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:2469]34224-1.727-0.1569No
128S100A1S100 calcium binding protein A1 [Source:HGNC Symbol;Acc:HGNC:10486]34576-1.939-0.1515No
129LGMNlegumain [Source:HGNC Symbol;Acc:HGNC:9472]34985-2.094-0.1463No
130TFtransferrin [Source:HGNC Symbol;Acc:HGNC:11740]35203-2.247-0.1349No
131CAPN5calpain 5 [Source:HGNC Symbol;Acc:HGNC:1482]35714-2.621-0.1285No
132GSNgelsolin [Source:HGNC Symbol;Acc:HGNC:4620]35912-2.745-0.1126No
133PLAUplasminogen activator, urokinase [Source:HGNC Symbol;Acc:HGNC:9052]36069-2.957-0.0941No
134VWFvon Willebrand factor [Source:HGNC Symbol;Acc:HGNC:12726]36273-3.197-0.0749No
135ANGangiogenin [Source:HGNC Symbol;Acc:HGNC:483]36735-3.884-0.0574No
136CPQcarboxypeptidase Q [Source:HGNC Symbol;Acc:HGNC:16910]36893-4.207-0.0292No
137CFHcomplement factor H [Source:HGNC Symbol;Acc:HGNC:4883]36978-4.4780.0030No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_COAGULATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_COAGULATION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_COAGULATION