Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetHALLMARK_PEROXISOME
Enrichment Score (ES)-0.4947518
Normalized Enrichment Score (NES)-1.0656366
Nominal p-value0.33292535
FDR q-value0.5752373
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_PEROXISOME   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CACNA1Bcalcium voltage-gated channel subunit alpha1 B [Source:HGNC Symbol;Acc:HGNC:1389]1084.4090.0341No
2ATXN1ataxin 1 [Source:HGNC Symbol;Acc:HGNC:10548]3283.4030.0568No
3ERCC1ERCC excision repair 1, endonuclease non-catalytic subunit [Source:HGNC Symbol;Acc:HGNC:3433]4653.1170.0792No
4SOD2superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180]6352.7630.0979No
5NUDT19nudix hydrolase 19 [Source:HGNC Symbol;Acc:HGNC:32036]6752.6970.1195No
6SLC25A19solute carrier family 25 member 19 [Source:HGNC Symbol;Acc:HGNC:14409]12211.9330.1210No
7ACSL4acyl-CoA synthetase long chain family member 4 [Source:HGNC Symbol;Acc:HGNC:3571]13351.8340.1333No
8ABCB9ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]14041.7630.1463No
9PRDX5peroxiredoxin 5 [Source:HGNC Symbol;Acc:HGNC:9355]17061.5320.1510No
10ACSL1acyl-CoA synthetase long chain family member 1 [Source:HGNC Symbol;Acc:HGNC:3569]17301.5180.1631No
11DHRS3dehydrogenase/reductase 3 [Source:HGNC Symbol;Acc:HGNC:17693]17861.4840.1741No
12TSPOtranslocator protein [Source:HGNC Symbol;Acc:HGNC:1158]22801.2860.1716No
13MVPmajor vault protein [Source:HGNC Symbol;Acc:HGNC:7531]23901.2220.1789No
14CNBPCCHC-type zinc finger nucleic acid binding protein [Source:HGNC Symbol;Acc:HGNC:13164]24371.1990.1877No
15PRDX1peroxiredoxin 1 [Source:HGNC Symbol;Acc:HGNC:9352]25801.1250.1933No
16CDK7cyclin dependent kinase 7 [Source:HGNC Symbol;Acc:HGNC:1778]25951.1150.2023No
17CRABP2cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2339]29550.9490.2006No
18PEX11Aperoxisomal biogenesis factor 11 alpha [Source:HGNC Symbol;Acc:HGNC:8852]32800.8420.1989No
19VPS4Bvacuolar protein sorting 4 homolog B [Source:HGNC Symbol;Acc:HGNC:10895]40920.5790.1818No
20YWHAHtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta [Source:HGNC Symbol;Acc:HGNC:12853]41960.5480.1836No
21ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit [Source:HGNC Symbol;Acc:HGNC:3435]46110.4380.1761No
22PEX5peroxisomal biogenesis factor 5 [Source:HGNC Symbol;Acc:HGNC:9719]46580.4260.1784No
23PEX14peroxisomal biogenesis factor 14 [Source:HGNC Symbol;Acc:HGNC:8856]46770.4190.1815No
24ACOT8acyl-CoA thioesterase 8 [Source:HGNC Symbol;Acc:HGNC:15919]50510.3240.1741No
25IDI1isopentenyl-diphosphate delta isomerase 1 [Source:HGNC Symbol;Acc:HGNC:5387]51210.3070.1748No
26FIS1fission, mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:21689]52520.2770.1736No
27BCL10BCL10 immune signaling adaptor [Source:HGNC Symbol;Acc:HGNC:989]54600.2260.1699No
28CLN8CLN8 transmembrane ER and ERGIC protein [Source:HGNC Symbol;Acc:HGNC:2079]55690.2020.1687No
29PEX13peroxisomal biogenesis factor 13 [Source:HGNC Symbol;Acc:HGNC:8855]56180.1860.1690No
30HRASHRas proto-oncogene, GTPase [Source:HGNC Symbol;Acc:HGNC:5173]61670.0540.1546No
31ACOX1acyl-CoA oxidase 1 [Source:HGNC Symbol;Acc:HGNC:119]62190.0390.1536No
32EPHX2epoxide hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:3402]80260.0000.1047No
33EHHADHenoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3247]80450.0000.1043No
34GSTK1glutathione S-transferase kappa 1 [Source:HGNC Symbol;Acc:HGNC:16906]97020.0000.0595No
35SLC27A2solute carrier family 27 member 2 [Source:HGNC Symbol;Acc:HGNC:10996]109970.0000.0245No
36ESR2estrogen receptor 2 [Source:HGNC Symbol;Acc:HGNC:3468]120690.000-0.0045No
37STSsteroid sulfatase [Source:HGNC Symbol;Acc:HGNC:11425]124790.000-0.0155No
38TTRtransthyretin [Source:HGNC Symbol;Acc:HGNC:12405]127500.000-0.0228No
39HSD11B2hydroxysteroid 11-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5209]144910.000-0.0699No
40CELcarboxyl ester lipase [Source:HGNC Symbol;Acc:HGNC:1848]157620.000-0.1042No
41DIO1iodothyronine deiodinase 1 [Source:HGNC Symbol;Acc:HGNC:2883]158220.000-0.1058No
42SERPINA6serpin family A member 6 [Source:HGNC Symbol;Acc:HGNC:1540]178290.000-0.1600No
43SEMA3Csemaphorin 3C [Source:HGNC Symbol;Acc:HGNC:10725]179020.000-0.1620No
44UGT2B17UDP glucuronosyltransferase family 2 member B17 [Source:HGNC Symbol;Acc:HGNC:12547]182350.000-0.1710No
45SULT2B1sulfotransferase family 2B member 1 [Source:HGNC Symbol;Acc:HGNC:11459]208660.000-0.2421No
46CRABP1cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]211590.000-0.2500No
47SCGB1A1secretoglobin family 1A member 1 [Source:HGNC Symbol;Acc:HGNC:12523]213550.000-0.2552No
48HAO2hydroxyacid oxidase 2 [Source:HGNC Symbol;Acc:HGNC:4810]220540.000-0.2741No
49ALDH1A1aldehyde dehydrogenase 1 family member A1 [Source:HGNC Symbol;Acc:HGNC:402]230030.000-0.2997No
50FABP6fatty acid binding protein 6 [Source:HGNC Symbol;Acc:HGNC:3561]242400.000-0.3331No
51ALBalbumin [Source:HGNC Symbol;Acc:HGNC:399]246670.000-0.3447No
52ABCC8ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]283380.000-0.4439No
53PEX2peroxisomal biogenesis factor 2 [Source:HGNC Symbol;Acc:HGNC:9717]28509-0.039-0.4482No
54PEX6peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]28523-0.043-0.4481No
55PABPC1poly(A) binding protein cytoplasmic 1 [Source:HGNC Symbol;Acc:HGNC:8554]28538-0.048-0.4481No
56SMARCC1SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]29049-0.188-0.4603No
57ACSL5acyl-CoA synthetase long chain family member 5 [Source:HGNC Symbol;Acc:HGNC:16526]29455-0.288-0.4689No
58CTBP1C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]30113-0.349-0.4837No
59ITGB1BP1integrin subunit beta 1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23927]30523-0.455-0.4909Yes
60CTPS1CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]30537-0.460-0.4874Yes
61HSD17B11hydroxysteroid 17-beta dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:22960]30616-0.479-0.4855Yes
62ISOC1isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]30700-0.501-0.4836Yes
63SIAH1siah E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:10857]30861-0.547-0.4833Yes
64SOD1superoxide dismutase 1 [Source:HGNC Symbol;Acc:HGNC:11179]31017-0.594-0.4825Yes
65RDH11retinol dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:17964]31071-0.611-0.4788Yes
66ABCB1ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]31270-0.658-0.4786Yes
67NR1I2nuclear receptor subfamily 1 group I member 2 [Source:HGNC Symbol;Acc:HGNC:7968]31311-0.672-0.4741Yes
68FDPSfarnesyl diphosphate synthase [Source:HGNC Symbol;Acc:HGNC:3631]31610-0.767-0.4757Yes
69GNPATglyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]31910-0.851-0.4766Yes
70SLC23A2solute carrier family 23 member 2 [Source:HGNC Symbol;Acc:HGNC:10973]31929-0.858-0.4699Yes
71MLYCDmalonyl-CoA decarboxylase [Source:HGNC Symbol;Acc:HGNC:7150]32187-0.934-0.4690Yes
72HSD17B4hydroxysteroid 17-beta dehydrogenase 4 [Source:HGNC Symbol;Acc:HGNC:5213]32403-1.002-0.4664Yes
73HMGCL3-hydroxy-3-methylglutaryl-CoA lyase [Source:HGNC Symbol;Acc:HGNC:5005]32465-1.022-0.4595Yes
74IDEinsulin degrading enzyme [Source:HGNC Symbol;Acc:HGNC:5381]32590-1.046-0.4540Yes
75CATcatalase [Source:HGNC Symbol;Acc:HGNC:1516]32898-1.165-0.4526Yes
76LONP2lon peptidase 2, peroxisomal [Source:HGNC Symbol;Acc:HGNC:20598]32973-1.193-0.4445Yes
77SLC25A4solute carrier family 25 member 4 [Source:HGNC Symbol;Acc:HGNC:10990]33036-1.217-0.4360Yes
78ABCD3ATP binding cassette subfamily D member 3 [Source:HGNC Symbol;Acc:HGNC:67]33330-1.305-0.4330Yes
79SLC25A17solute carrier family 25 member 17 [Source:HGNC Symbol;Acc:HGNC:10987]33528-1.402-0.4265Yes
80CADM1cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5951]33689-1.467-0.4185Yes
81PEX11Bperoxisomal biogenesis factor 11 beta [Source:HGNC Symbol;Acc:HGNC:8853]33930-1.582-0.4117Yes
82SCP2sterol carrier protein 2 [Source:HGNC Symbol;Acc:HGNC:10606]33990-1.614-0.3998Yes
83RETSATretinol saturase [Source:HGNC Symbol;Acc:HGNC:25991]34151-1.695-0.3899Yes
84RXRGretinoid X receptor gamma [Source:HGNC Symbol;Acc:HGNC:10479]34247-1.740-0.3778Yes
85IDH2isocitrate dehydrogenase (NADP(+)) 2 [Source:HGNC Symbol;Acc:HGNC:5383]34291-1.761-0.3642Yes
86ECI2enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]34527-1.908-0.3545Yes
87ALDH9A1aldehyde dehydrogenase 9 family member A1 [Source:HGNC Symbol;Acc:HGNC:412]34541-1.916-0.3388Yes
88DLG4discs large MAGUK scaffold protein 4 [Source:HGNC Symbol;Acc:HGNC:2903]34593-1.945-0.3238Yes
89FADS1fatty acid desaturase 1 [Source:HGNC Symbol;Acc:HGNC:3574]34930-2.058-0.3156Yes
90TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35009-2.109-0.3000Yes
91ACAA1acetyl-CoA acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:82]35239-2.263-0.2872Yes
92SLC35B2solute carrier family 35 member B2 [Source:HGNC Symbol;Acc:HGNC:16872]35460-2.410-0.2730Yes
93ABCC5ATP binding cassette subfamily C member 5 [Source:HGNC Symbol;Acc:HGNC:56]35479-2.422-0.2531Yes
94DHCR2424-dehydrocholesterol reductase [Source:HGNC Symbol;Acc:HGNC:2859]35557-2.490-0.2343Yes
95ELOVL5ELOVL fatty acid elongase 5 [Source:HGNC Symbol;Acc:HGNC:21308]35682-2.599-0.2158Yes
96ABCB4ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]35709-2.616-0.1945Yes
97ECH1enoyl-CoA hydratase 1 [Source:HGNC Symbol;Acc:HGNC:3149]35741-2.646-0.1732Yes
98ABCD1ATP binding cassette subfamily D member 1 [Source:HGNC Symbol;Acc:HGNC:61]35761-2.661-0.1513Yes
99CLN6CLN6 transmembrane ER protein [Source:HGNC Symbol;Acc:HGNC:2077]36017-2.891-0.1340Yes
100CRATcarnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]36090-2.978-0.1109Yes
101MSH2mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]36496-3.487-0.0926Yes
102IDH1isocitrate dehydrogenase (NADP(+)) 1 [Source:HGNC Symbol;Acc:HGNC:5382]36786-3.986-0.0669Yes
103HSD3B7hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 [Source:HGNC Symbol;Acc:HGNC:18324]36883-4.190-0.0343Yes
104ABCD2ATP binding cassette subfamily D member 2 [Source:HGNC Symbol;Acc:HGNC:66]37040-4.7530.0014Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_PEROXISOME   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_PEROXISOME: Random ES distribution   
Gene set null distribution of ES for HALLMARK_PEROXISOME