Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetHALLMARK_SPERMATOGENESIS
Enrichment Score (ES)-0.6169435
Normalized Enrichment Score (NES)-1.3674551
Nominal p-value0.00591716
FDR q-value0.12994139
FWER p-Value0.428
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_SPERMATOGENESIS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]5482.9090.0141No
2ELOVL3ELOVL fatty acid elongase 3 [Source:HGNC Symbol;Acc:HGNC:18047]5882.8020.0410No
3DPEP3dipeptidase 3 [Source:HGNC Symbol;Acc:HGNC:23029]6942.6500.0646No
4PGS1phosphatidylglycerophosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:30029]25071.1640.0271No
5CNIH2cornichon family AMPA receptor auxiliary protein 2 [Source:HGNC Symbol;Acc:HGNC:28744]28321.0110.0284No
6TCP11t-complex 11 [Source:HGNC Symbol;Acc:HGNC:11658]31650.8820.0282No
7TEKT2tektin 2 [Source:HGNC Symbol;Acc:HGNC:11725]32270.8580.0351No
8TLE4TLE family member 4, transcriptional corepressor [Source:HGNC Symbol;Acc:HGNC:11840]33890.8050.0388No
9CCT6Bchaperonin containing TCP1 subunit 6B [Source:HGNC Symbol;Acc:HGNC:1621]38100.6710.0341No
10ARL4AADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]42320.5360.0281No
11TSNtranslin [Source:HGNC Symbol;Acc:HGNC:12379]42380.5330.0332No
12MAST2microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]43220.5160.0361No
13STAM2signal transducing adaptor molecule 2 [Source:HGNC Symbol;Acc:HGNC:11358]45520.4550.0345No
14PAPOLBpoly(A) polymerase beta [Source:HGNC Symbol;Acc:HGNC:15970]48010.3940.0317No
15NAA11N-alpha-acetyltransferase 11, NatA catalytic subunit [Source:HGNC Symbol;Acc:HGNC:28125]48220.3880.0350No
16AGFG1ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]48620.3800.0377No
17IP6K1inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]50750.3160.0352No
18ACTL7Bactin like 7B [Source:HGNC Symbol;Acc:HGNC:162]51660.2920.0356No
19CLGNcalmegin [Source:HGNC Symbol;Acc:HGNC:2060]53750.2450.0325No
20MLF1myeloid leukemia factor 1 [Source:HGNC Symbol;Acc:HGNC:7125]54750.2240.0320No
21RAD17RAD17 checkpoint clamp loader component [Source:HGNC Symbol;Acc:HGNC:9807]58660.1300.0227No
22CSNK2A2casein kinase 2 alpha 2 [Source:HGNC Symbol;Acc:HGNC:2459]60200.0930.0195No
23CLPBcaseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664]61860.0490.0155No
24PEBP1phosphatidylethanolamine binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8630]62230.0380.0149No
25CHFRcheckpoint with forkhead and ring finger domains [Source:HGNC Symbol;Acc:HGNC:20455]63390.0110.0119No
26SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]65960.0000.0050No
27SCG3secretogranin III [Source:HGNC Symbol;Acc:HGNC:13707]65980.0000.0050No
28ADCYAP1adenylate cyclase activating polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:241]74230.000-0.0173No
29ART3ADP-ribosyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:725]75310.000-0.0202No
30CCNA1cyclin A1 [Source:HGNC Symbol;Acc:HGNC:1577]76410.000-0.0232No
31ZC2HC1Czinc finger C2HC-type containing 1C [Source:HGNC Symbol;Acc:HGNC:20354]83610.000-0.0426No
32HOXB1homeobox B1 [Source:HGNC Symbol;Acc:HGNC:5111]89320.000-0.0580No
33ADAM2ADAM metallopeptidase domain 2 [Source:HGNC Symbol;Acc:HGNC:198]90120.000-0.0602No
34ADAD1adenosine deaminase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30713]91650.000-0.0643No
35CAMK4calcium/calmodulin dependent protein kinase IV [Source:HGNC Symbol;Acc:HGNC:1464]91870.000-0.0649No
36CRISP2cysteine rich secretory protein 2 [Source:HGNC Symbol;Acc:HGNC:12024]92290.000-0.0660No
37NPY5Rneuropeptide Y receptor Y5 [Source:HGNC Symbol;Acc:HGNC:7958]92360.000-0.0661No
38DMRT1doublesex and mab-3 related transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:2934]96210.000-0.0765No
39NEFHneurofilament heavy [Source:HGNC Symbol;Acc:HGNC:7737]97360.000-0.0796No
40GRM8glutamate metabotropic receptor 8 [Source:HGNC Symbol;Acc:HGNC:4600]100290.000-0.0875No
41TULP2TUB like protein 2 [Source:HGNC Symbol;Acc:HGNC:12424]102070.000-0.0923No
42CFTRCF transmembrane conductance regulator [Source:HGNC Symbol;Acc:HGNC:1884]102380.000-0.0931No
43LDHClactate dehydrogenase C [Source:HGNC Symbol;Acc:HGNC:6544]111960.000-0.1190No
44PRM2protamine 2 [Source:HGNC Symbol;Acc:HGNC:9448]116690.000-0.1318No
45SEPTIN4septin 4 [Source:HGNC Symbol;Acc:HGNC:9165]118560.000-0.1368No
46JAM3junctional adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:15532]122170.000-0.1465No
47GAD1glutamate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:4092]125510.000-0.1556No
48THEGtheg spermatid protein [Source:HGNC Symbol;Acc:HGNC:13706]127730.000-0.1615No
49TNP2transition protein 2 [Source:HGNC Symbol;Acc:HGNC:11952]150790.000-0.2239No
50TNP1transition protein 1 [Source:HGNC Symbol;Acc:HGNC:11951]150810.000-0.2239No
51HTR5A5-hydroxytryptamine receptor 5A [Source:HGNC Symbol;Acc:HGNC:5300]156140.000-0.2383No
52CLVS1clavesin 1 [Source:HGNC Symbol;Acc:HGNC:23139]157400.000-0.2417No
53MTNR1Amelatonin receptor 1A [Source:HGNC Symbol;Acc:HGNC:7463]158250.000-0.2440No
54DCCDCC netrin 1 receptor [Source:HGNC Symbol;Acc:HGNC:2701]160220.000-0.2493No
55GAPDHSglyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:HGNC Symbol;Acc:HGNC:24864]165020.000-0.2622No
56AKAP4A-kinase anchoring protein 4 [Source:HGNC Symbol;Acc:HGNC:374]166580.000-0.2664No
57DMC1DNA meiotic recombinase 1 [Source:HGNC Symbol;Acc:HGNC:2927]169240.000-0.2736No
58TKTL1transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]172540.000-0.2825No
59HBZhemoglobin subunit zeta [Source:HGNC Symbol;Acc:HGNC:4835]173010.000-0.2838No
60SYCP1synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]178950.000-0.2998No
61DNAJB8DnaJ heat shock protein family (Hsp40) member B8 [Source:HGNC Symbol;Acc:HGNC:23699]185750.000-0.3182No
62IL12RB2interleukin 12 receptor subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:5972]197050.000-0.3487No
63MEP1Bmeprin A subunit beta [Source:HGNC Symbol;Acc:HGNC:7020]203230.000-0.3654No
64ACRV1acrosomal vesicle protein 1 [Source:HGNC Symbol;Acc:HGNC:127]205300.000-0.3710No
65TSSK2testis specific serine kinase 2 [Source:HGNC Symbol;Acc:HGNC:11401]217080.000-0.4028No
66SNAP91synaptosome associated protein 91 [Source:HGNC Symbol;Acc:HGNC:14986]218410.000-0.4064No
67CST8cystatin 8 [Source:HGNC Symbol;Acc:HGNC:2480]218790.000-0.4074No
68OAZ3ornithine decarboxylase antizyme 3 [Source:HGNC Symbol;Acc:HGNC:8097]230510.000-0.4391No
69ODF1outer dense fiber of sperm tails 1 [Source:HGNC Symbol;Acc:HGNC:8113]237660.000-0.4584No
70ZNRF4zinc and ring finger 4 [Source:HGNC Symbol;Acc:HGNC:17726]238060.000-0.4595No
71DDX4DEAD-box helicase 4 [Source:HGNC Symbol;Acc:HGNC:18700]238810.000-0.4615No
72ACEangiotensin I converting enzyme [Source:HGNC Symbol;Acc:HGNC:2707]245020.000-0.4783No
73PCSK1Nproprotein convertase subtilisin/kexin type 1 inhibitor [Source:HGNC Symbol;Acc:HGNC:17301]255270.000-0.5060No
74SHESrc homology 2 domain containing E [Source:HGNC Symbol;Acc:HGNC:27004]256450.000-0.5091No
75YBX2Y-box binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17948]277360.000-0.5657No
76H1-6H1.6 linker histone, cluster member [Source:HGNC Symbol;Acc:HGNC:4720]277990.000-0.5674No
77DDX25DEAD-box helicase 25 [Source:HGNC Symbol;Acc:HGNC:18698]281620.000-0.5772No
78MAP7microtubule associated protein 7 [Source:HGNC Symbol;Acc:HGNC:6869]282450.000-0.5794No
79SLC2A5solute carrier family 2 member 5 [Source:HGNC Symbol;Acc:HGNC:11010]283270.000-0.5816No
80TALDO1transaldolase 1 [Source:HGNC Symbol;Acc:HGNC:11559]28418-0.016-0.5839No
81CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]28769-0.115-0.5922No
82PIAS2protein inhibitor of activated STAT 2 [Source:HGNC Symbol;Acc:HGNC:17311]28776-0.116-0.5912No
83MLLT10MLLT10 histone lysine methyltransferase DOT1L cofactor [Source:HGNC Symbol;Acc:HGNC:16063]29214-0.223-0.6008No
84GPR182G protein-coupled receptor 182 [Source:HGNC Symbol;Acc:HGNC:13708]29220-0.226-0.5987No
85PHKG2phosphorylase kinase catalytic subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:8931]29490-0.296-0.6030No
86NOS1nitric oxide synthase 1 [Source:HGNC Symbol;Acc:HGNC:7872]29598-0.320-0.6027No
87GFI1growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]29718-0.320-0.6027No
88GSTM3glutathione S-transferase mu 3 [Source:HGNC Symbol;Acc:HGNC:4635]29970-0.320-0.6063No
89ALOX15arachidonate 15-lipoxygenase [Source:HGNC Symbol;Acc:HGNC:433]30004-0.324-0.6040No
90CHRM4cholinergic receptor muscarinic 4 [Source:HGNC Symbol;Acc:HGNC:1953]30187-0.370-0.6053No
91BRAFB-Raf proto-oncogene, serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1097]30486-0.442-0.6089No
92PGK2phosphoglycerate kinase 2 [Source:HGNC Symbol;Acc:HGNC:8898]30784-0.521-0.6118Yes
93SIRT1sirtuin 1 [Source:HGNC Symbol;Acc:HGNC:14929]30806-0.528-0.6071Yes
94PRKAR2Aprotein kinase cAMP-dependent type II regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9391]31076-0.612-0.6082Yes
95COILcoilin [Source:HGNC Symbol;Acc:HGNC:2184]31091-0.612-0.6025Yes
96AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]31203-0.642-0.5991Yes
97HSPA1Lheat shock protein family A (Hsp70) member 1 like [Source:HGNC Symbol;Acc:HGNC:5234]31275-0.659-0.5945Yes
98TUBA3Ctubulin alpha 3c [Source:HGNC Symbol;Acc:HGNC:12408]31403-0.701-0.5909Yes
99PSMG1proteasome assembly chaperone 1 [Source:HGNC Symbol;Acc:HGNC:3043]31667-0.780-0.5903Yes
100PDHA2pyruvate dehydrogenase E1 subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:8807]31748-0.805-0.5844Yes
101VDAC3voltage dependent anion channel 3 [Source:HGNC Symbol;Acc:HGNC:12674]31755-0.806-0.5766Yes
102SPATA6spermatogenesis associated 6 [Source:HGNC Symbol;Acc:HGNC:18309]32093-0.905-0.5767Yes
103MTORmechanistic target of rapamycin kinase [Source:HGNC Symbol;Acc:HGNC:3942]32186-0.934-0.5699Yes
104SLC12A2solute carrier family 12 member 2 [Source:HGNC Symbol;Acc:HGNC:10911]32400-1.001-0.5656Yes
105ZC3H14zinc finger CCCH-type containing 14 [Source:HGNC Symbol;Acc:HGNC:20509]32578-1.041-0.5601Yes
106IDEinsulin degrading enzyme [Source:HGNC Symbol;Acc:HGNC:5381]32590-1.046-0.5499Yes
107PHF7PHD finger protein 7 [Source:HGNC Symbol;Acc:HGNC:18458]33175-1.274-0.5530Yes
108POMCproopiomelanocortin [Source:HGNC Symbol;Acc:HGNC:9201]33307-1.304-0.5436Yes
109GSG1germ cell associated 1 [Source:HGNC Symbol;Acc:HGNC:19716]33435-1.360-0.5335Yes
110CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]33668-1.457-0.5252Yes
111PARP2poly(ADP-ribose) polymerase 2 [Source:HGNC Symbol;Acc:HGNC:272]33696-1.470-0.5113Yes
112ZPBPzona pellucida binding protein [Source:HGNC Symbol;Acc:HGNC:15662]33878-1.546-0.5008Yes
113NF2neurofibromin 2 [Source:HGNC Symbol;Acc:HGNC:7773]34314-1.777-0.4949Yes
114CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]34479-1.876-0.4807Yes
115PACRGparkin coregulated [Source:HGNC Symbol;Acc:HGNC:19152]34512-1.893-0.4627Yes
116EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]34559-1.929-0.4447Yes
117TNNI3troponin I3, cardiac type [Source:HGNC Symbol;Acc:HGNC:11947]34851-2.012-0.4325Yes
118NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]34857-2.014-0.4126Yes
119KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]35003-2.106-0.3955Yes
120DBF4DBF4 zinc finger [Source:HGNC Symbol;Acc:HGNC:17364]35030-2.121-0.3751Yes
121RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]35074-2.151-0.3548Yes
122NEK2NIMA related kinase 2 [Source:HGNC Symbol;Acc:HGNC:7745]35145-2.200-0.3348Yes
123IFT88intraflagellar transport 88 [Source:HGNC Symbol;Acc:HGNC:20606]35186-2.235-0.3136Yes
124TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]35199-2.244-0.2916Yes
125NPHP1nephrocystin 1 [Source:HGNC Symbol;Acc:HGNC:7905]35255-2.276-0.2704Yes
126BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]35269-2.283-0.2480Yes
127HSPA4Lheat shock protein family A (Hsp70) member 4 like [Source:HGNC Symbol;Acc:HGNC:17041]35739-2.643-0.2344Yes
128STRBPspermatid perinuclear RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16462]35945-2.791-0.2121Yes
129TOPBP1DNA topoisomerase II binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17008]35948-2.793-0.1843Yes
130HSPA2heat shock protein family A (Hsp70) member 2 [Source:HGNC Symbol;Acc:HGNC:5235]36030-2.912-0.1575Yes
131GMCL1germ cell-less 1, spermatogenesis associated [Source:HGNC Symbol;Acc:HGNC:23843]36079-2.966-0.1293Yes
132PCSK4proprotein convertase subtilisin/kexin type 4 [Source:HGNC Symbol;Acc:HGNC:8746]36499-3.491-0.1058Yes
133ACRBPacrosin binding protein [Source:HGNC Symbol;Acc:HGNC:17195]36642-3.720-0.0726Yes
134RPL39Lribosomal protein L39 like [Source:HGNC Symbol;Acc:HGNC:17094]36653-3.721-0.0358Yes
135LPIN1lipin 1 [Source:HGNC Symbol;Acc:HGNC:13345]37047-4.7780.0012Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_SPERMATOGENESIS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_SPERMATOGENESIS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_SPERMATOGENESIS