Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #WT_LPS_versus_WT_NA.Nof1.cls #WT_LPS_versus_WT_NA_repos |
| Phenotype | Nof1.cls#WT_LPS_versus_WT_NA_repos |
| Upregulated in class | WT_NA |
| GeneSet | CHR15Q13 |
| Enrichment Score (ES) | -0.76954025 |
| Normalized Enrichment Score (NES) | -1.5601209 |
| Nominal p-value | 0.0011737089 |
| FDR q-value | 0.036853705 |
| FWER p-Value | 0.073 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | NCAPGP2 | non-SMC condensin I complex subunit G pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:51905] | 2444 | 1.149 | -0.0335 | No |
| 2 | HMGN2P5 | high mobility group nucleosomal binding domain 2 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:33568] | 2477 | 1.146 | -0.0020 | No |
| 3 | PDCD6IPP2 | PDCD6IP pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:49873] | 4276 | 0.439 | -0.0381 | No |
| 4 | SCG5 | secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816] | 6368 | 0.000 | -0.0946 | No |
| 5 | RN7SL238P | RNA, 7SL, cytoplasmic 238, pseudogene [Source:HGNC Symbol;Acc:HGNC:46254] | 6427 | 0.000 | -0.0962 | No |
| 6 | GREM1 | gremlin 1, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:2001] | 8106 | 0.000 | -0.1415 | No |
| 7 | DNM1P50 | dynamin 1 pseudogene 50 [Source:HGNC Symbol;Acc:HGNC:48499] | 8851 | 0.000 | -0.1616 | No |
| 8 | DNM1P30 | dynamin 1 pseudogene 30 [Source:HGNC Symbol;Acc:HGNC:35177] | 8933 | 0.000 | -0.1638 | No |
| 9 | DNM1P28 | dynamin 1 pseudogene 28 [Source:HGNC Symbol;Acc:HGNC:35175] | 8948 | 0.000 | -0.1642 | No |
| 10 | DNM1P31 | dynamin 1 pseudogene 31 [Source:HGNC Symbol;Acc:HGNC:35178] | 8964 | 0.000 | -0.1646 | No |
| 11 | DNM1P32 | dynamin 1 pseudogene 32 [Source:HGNC Symbol;Acc:HGNC:35179] | 8965 | 0.000 | -0.1646 | No |
| 12 | HERC2P9 | hect domain and RLD 2 pseudogene 9 [Source:HGNC Symbol;Acc:HGNC:30495] | 11109 | 0.000 | -0.2225 | No |
| 13 | RYR3 | ryanodine receptor 3 [Source:HGNC Symbol;Acc:HGNC:10485] | 11840 | 0.000 | -0.2422 | No |
| 14 | RN7SL673P | RNA, 7SL, cytoplasmic 673, pseudogene [Source:HGNC Symbol;Acc:HGNC:46689] | 11984 | 0.000 | -0.2461 | No |
| 15 | GOLGA6L7 | golgin A6 family like 7 [Source:HGNC Symbol;Acc:HGNC:37442] | 12668 | 0.000 | -0.2645 | No |
| 16 | AC091057.1 | OTU deubiquitinase 7A pseudogene [Source:NCBI gene (formerly Entrezgene);Acc:100288637] | 12692 | 0.000 | -0.2652 | No |
| 17 | CHRFAM7A | CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion [Source:HGNC Symbol;Acc:HGNC:15781] | 13089 | 0.000 | -0.2759 | No |
| 18 | TJP1 | tight junction protein 1 [Source:HGNC Symbol;Acc:HGNC:11827] | 13335 | 0.000 | -0.2825 | No |
| 19 | LINC02256 | long intergenic non-protein coding RNA 2256 [Source:HGNC Symbol;Acc:HGNC:53157] | 13728 | 0.000 | -0.2931 | No |
| 20 | LINC02249 | long intergenic non-protein coding RNA 2249 [Source:HGNC Symbol;Acc:HGNC:32351] | 13743 | 0.000 | -0.2934 | No |
| 21 | ULK4P1 | ULK4 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:15775] | 14408 | 0.000 | -0.3114 | No |
| 22 | ULK4P3 | ULK4 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:15777] | 14410 | 0.000 | -0.3114 | No |
| 23 | ULK4P2 | ULK4 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:15776] | 14411 | 0.000 | -0.3114 | No |
| 24 | TMCO5B | transmembrane and coiled-coil domains 5B (pseudogene) [Source:HGNC Symbol;Acc:HGNC:34243] | 14450 | 0.000 | -0.3124 | No |
| 25 | RN7SL185P | RNA, 7SL, cytoplasmic 185, pseudogene [Source:HGNC Symbol;Acc:HGNC:46201] | 14474 | 0.000 | -0.3131 | No |
| 26 | RN7SL196P | RNA, 7SL, cytoplasmic 196, pseudogene [Source:HGNC Symbol;Acc:HGNC:46212] | 14899 | 0.000 | -0.3245 | No |
| 27 | LINC02352 | long intergenic non-protein coding RNA 2352 [Source:HGNC Symbol;Acc:HGNC:53274] | 15000 | 0.000 | -0.3272 | No |
| 28 | GOLGA8UP | golgin A8 family member U, pseudogene [Source:HGNC Symbol;Acc:HGNC:44411] | 15124 | 0.000 | -0.3305 | No |
| 29 | HERC2P11 | hect domain and RLD 2 pseudogene 11 [Source:HGNC Symbol;Acc:HGNC:49882] | 15715 | 0.000 | -0.3465 | No |
| 30 | ABCB10P4 | ABCB10 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:31130] | 16103 | 0.000 | -0.3569 | No |
| 31 | ABCB10P3 | ABCB10 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:31129] | 16104 | 0.000 | -0.3569 | No |
| 32 | FAM189A1 | family with sequence similarity 189 member A1 [Source:HGNC Symbol;Acc:HGNC:29075] | 17271 | 0.000 | -0.3884 | No |
| 33 | RN7SL539P | RNA, 7SL, cytoplasmic 539, pseudogene [Source:HGNC Symbol;Acc:HGNC:46555] | 17604 | 0.000 | -0.3974 | No |
| 34 | RN7SL796P | RNA, 7SL, cytoplasmic 796, pseudogene [Source:HGNC Symbol;Acc:HGNC:46812] | 17705 | 0.000 | -0.4001 | No |
| 35 | MIR4509-3 | microRNA 4509-3 [Source:HGNC Symbol;Acc:HGNC:41610] | 19576 | 0.000 | -0.4506 | No |
| 36 | MIR4509-2 | microRNA 4509-2 [Source:HGNC Symbol;Acc:HGNC:41537] | 19577 | 0.000 | -0.4506 | No |
| 37 | AC012236.1 | uncharacterized LOC283710 [Source:NCBI gene (formerly Entrezgene);Acc:283710] | 20624 | 0.000 | -0.4789 | No |
| 38 | RN7SL286P | RNA, 7SL, cytoplasmic 286, pseudogene [Source:HGNC Symbol;Acc:HGNC:46302] | 20865 | 0.000 | -0.4854 | No |
| 39 | RN7SL469P | RNA, 7SL, cytoplasmic 469, pseudogene [Source:HGNC Symbol;Acc:HGNC:46485] | 21443 | 0.000 | -0.5010 | No |
| 40 | GOLGA8R | golgin A8 family member R [Source:HGNC Symbol;Acc:HGNC:44407] | 21596 | 0.000 | -0.5051 | No |
| 41 | GOLGA8T | golgin A8 family member T [Source:HGNC Symbol;Acc:HGNC:44410] | 21598 | 0.000 | -0.5051 | No |
| 42 | GOLGA8K | golgin A8 family member K [Source:HGNC Symbol;Acc:HGNC:38652] | 21601 | 0.000 | -0.5051 | No |
| 43 | GOLGA8J | golgin A8 family member J [Source:HGNC Symbol;Acc:HGNC:38650] | 21602 | 0.000 | -0.5051 | No |
| 44 | GOLGA8M | golgin A8 family member M [Source:HGNC Symbol;Acc:HGNC:44404] | 21603 | 0.000 | -0.5051 | No |
| 45 | GOLGA8O | golgin A8 family member O [Source:HGNC Symbol;Acc:HGNC:44406] | 21604 | 0.000 | -0.5051 | No |
| 46 | GOLGA8N | golgin A8 family member N [Source:HGNC Symbol;Acc:HGNC:44405] | 21605 | 0.000 | -0.5051 | No |
| 47 | GOLGA8Q | golgin A8 family member Q [Source:HGNC Symbol;Acc:HGNC:44408] | 21606 | 0.000 | -0.5051 | No |
| 48 | GOLGA8G | golgin A8 family member G [Source:HGNC Symbol;Acc:HGNC:25328] | 21609 | 0.000 | -0.5052 | No |
| 49 | GOLGA8F | golgin A8 family member F [Source:HGNC Symbol;Acc:HGNC:32378] | 21612 | 0.000 | -0.5053 | No |
| 50 | GOLGA8H | golgin A8 family member H [Source:HGNC Symbol;Acc:HGNC:37443] | 21613 | 0.000 | -0.5053 | No |
| 51 | CHRNA7 | cholinergic receptor nicotinic alpha 7 subunit [Source:HGNC Symbol;Acc:HGNC:1960] | 21847 | 0.000 | -0.5116 | No |
| 52 | OCA2 | OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101] | 23260 | 0.000 | -0.5497 | No |
| 53 | AC022613.1 | novel transcript, antisense to TJP1 | 23359 | 0.000 | -0.5523 | No |
| 54 | RN7SL719P | RNA, 7SL, cytoplasmic 719, pseudogene [Source:HGNC Symbol;Acc:HGNC:46735] | 24106 | 0.000 | -0.5725 | No |
| 55 | RNU6-466P | RNA, U6 small nuclear 466, pseudogene [Source:HGNC Symbol;Acc:HGNC:47429] | 25293 | 0.000 | -0.6045 | No |
| 56 | RN7SL82P | RNA, 7SL, cytoplasmic 82, pseudogene [Source:HGNC Symbol;Acc:HGNC:46098] | 25334 | 0.000 | -0.6056 | No |
| 57 | MIR211 | microRNA 211 [Source:HGNC Symbol;Acc:HGNC:31588] | 25724 | 0.000 | -0.6161 | No |
| 58 | RN7SL628P | RNA, 7SL, cytoplasmic 628, pseudogene [Source:HGNC Symbol;Acc:HGNC:46644] | 26280 | 0.000 | -0.6311 | No |
| 59 | RNU6-18P | RNA, U6 small nuclear 18, pseudogene [Source:HGNC Symbol;Acc:HGNC:34262] | 27932 | 0.000 | -0.6757 | No |
| 60 | RNU6-17P | RNA, U6 small nuclear 17, pseudogene [Source:HGNC Symbol;Acc:HGNC:34261] | 27958 | 0.000 | -0.6764 | No |
| 61 | FMN1 | formin 1 [Source:HGNC Symbol;Acc:HGNC:3768] | 29482 | -0.357 | -0.7075 | No |
| 62 | MTMR10 | myotubularin related protein 10 [Source:HGNC Symbol;Acc:HGNC:25999] | 31781 | -0.984 | -0.7417 | Yes |
| 63 | RPL5P32 | ribosomal protein L5 pseudogene 32 [Source:HGNC Symbol;Acc:HGNC:36973] | 31785 | -0.986 | -0.7139 | Yes |
| 64 | APBA2 | amyloid beta precursor protein binding family A member 2 [Source:HGNC Symbol;Acc:HGNC:579] | 31863 | -1.011 | -0.6874 | Yes |
| 65 | HERC2P10 | hect domain and RLD 2 pseudogene 10 [Source:HGNC Symbol;Acc:HGNC:39056] | 32676 | -1.317 | -0.6721 | Yes |
| 66 | NSMCE3 | NSE3 homolog, SMC5-SMC6 complex component [Source:HGNC Symbol;Acc:HGNC:7677] | 33201 | -1.529 | -0.6430 | Yes |
| 67 | WHAMMP2 | WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:32360] | 33339 | -1.529 | -0.6034 | Yes |
| 68 | OTUD7A | OTU deubiquitinase 7A [Source:HGNC Symbol;Acc:HGNC:20718] | 33342 | -1.529 | -0.5602 | Yes |
| 69 | KLF13 | Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672] | 33505 | -1.604 | -0.5192 | Yes |
| 70 | ARHGAP11B | Rho GTPase activating protein 11B [Source:HGNC Symbol;Acc:HGNC:15782] | 33953 | -1.803 | -0.4803 | Yes |
| 71 | ARHGAP11A | Rho GTPase activating protein 11A [Source:HGNC Symbol;Acc:HGNC:15783] | 34116 | -1.885 | -0.4313 | Yes |
| 72 | HNRNPA1P71 | heterogeneous nuclear ribonucleoprotein A1 pseudogene 71 [Source:HGNC Symbol;Acc:HGNC:48801] | 34164 | -1.912 | -0.3785 | Yes |
| 73 | HERC2 | HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:4868] | 34495 | -2.088 | -0.3283 | Yes |
| 74 | TUBBP8 | tubulin beta class I pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:42179] | 34636 | -2.170 | -0.2707 | Yes |
| 75 | FAN1 | FANCD2 and FANCI associated nuclease 1 [Source:HGNC Symbol;Acc:HGNC:29170] | 35040 | -2.386 | -0.2141 | Yes |
| 76 | UBE2CP4 | ubiquitin conjugating enzyme E2 C pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:43553] | 35213 | -2.528 | -0.1472 | Yes |
| 77 | RPL41P2 | ribosomal protein L41 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:10357] | 36203 | -3.399 | -0.0778 | Yes |
| 78 | TRPM1 | transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146] | 36409 | -3.596 | 0.0184 | Yes |
