Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetCHR17Q11
Enrichment Score (ES)0.39090252
Normalized Enrichment Score (NES)1.0374813
Nominal p-value0.26804122
FDR q-value0.8362949
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR17Q11   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1NOS2nitric oxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:7873]414.9110.0436Yes
2LGALS9galectin 9 [Source:HGNC Symbol;Acc:HGNC:6570]1244.5100.0824Yes
3ADAP2ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]1984.1850.1185Yes
4SLC6A4solute carrier family 6 member 4 [Source:HGNC Symbol;Acc:HGNC:11050]2004.1790.1565Yes
5CPDcarboxypeptidase D [Source:HGNC Symbol;Acc:HGNC:2301]2064.1660.1943Yes
6TMEM98transmembrane protein 98 [Source:HGNC Symbol;Acc:HGNC:24529]4913.2340.2160Yes
7MYO1Dmyosin ID [Source:HGNC Symbol;Acc:HGNC:7598]9482.4320.2258Yes
8RNF135ring finger protein 135 [Source:HGNC Symbol;Acc:HGNC:21158]10492.2660.2437Yes
9FAM222Bfamily with sequence similarity 222 member B [Source:HGNC Symbol;Acc:HGNC:25563]12891.9660.2552Yes
10EFCAB5EF-hand calcium binding domain 5 [Source:HGNC Symbol;Acc:HGNC:24801]16061.7520.2626Yes
11CDK5R1cyclin dependent kinase 5 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:1775]16091.7480.2784Yes
12SLC46A1solute carrier family 46 member 1 [Source:HGNC Symbol;Acc:HGNC:30521]16601.6840.2924Yes
13NEK8NIMA related kinase 8 [Source:HGNC Symbol;Acc:HGNC:13387]19781.4460.2970Yes
14PSMD11proteasome 26S subunit, non-ATPase 11 [Source:HGNC Symbol;Acc:HGNC:9556]20351.3990.3082Yes
15TNFAIP1TNF alpha induced protein 1 [Source:HGNC Symbol;Acc:HGNC:11894]21121.3560.3184Yes
16SUPT6HSPT6 homolog, histone chaperone and transcription elongation factor [Source:HGNC Symbol;Acc:HGNC:11470]21801.3080.3285Yes
17ERAL1Era like 12S mitochondrial rRNA chaperone 1 [Source:HGNC Symbol;Acc:HGNC:3424]22561.2610.3380Yes
18GOSR1golgi SNAP receptor complex member 1 [Source:HGNC Symbol;Acc:HGNC:4430]24101.1700.3445Yes
19NUFIP2nuclear FMR1 interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:17634]26111.0840.3489Yes
20LYRM9LYR motif containing 9 [Source:HGNC Symbol;Acc:HGNC:27314]26441.0630.3578Yes
21TAOK1TAO kinase 1 [Source:HGNC Symbol;Acc:HGNC:29259]26781.0440.3664Yes
22CRLF3cytokine receptor like factor 3 [Source:HGNC Symbol;Acc:HGNC:17177]26921.0340.3754Yes
23WDR45BP1WD repeat domain 45B pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:26605]29890.8990.3756Yes
24IFT20intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]30660.8640.3814Yes
25SH3GL1P2SH3 domain containing GRB2 like 1, endophilin A2 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:10836]32890.7850.3825Yes
26WSB1WD repeat and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:19221]35690.6800.3812Yes
27ZNF207zinc finger protein 207 [Source:HGNC Symbol;Acc:HGNC:12998]37010.6340.3834Yes
28EVI2Becotropic viral integration site 2B [Source:HGNC Symbol;Acc:HGNC:3500]38290.5910.3853Yes
29BLMHbleomycin hydrolase [Source:HGNC Symbol;Acc:HGNC:1059]38760.5730.3893Yes
30EVI2Aecotropic viral integration site 2A [Source:HGNC Symbol;Acc:HGNC:3499]39990.5370.3909Yes
31RPL23Aribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]42360.4520.3886No
32NLKnemo like kinase [Source:HGNC Symbol;Acc:HGNC:29858]46080.3380.3817No
33TMEM199transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]49840.2350.3736No
34NSRP1nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]51490.1870.3709No
35UBL5P2ubiquitin like 5 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:44640]54830.1530.3633No
36UTP6UTP6 small subunit processome component [Source:HGNC Symbol;Acc:HGNC:18279]57250.1280.3579No
37SEZ6seizure related 6 homolog [Source:HGNC Symbol;Acc:HGNC:15955]71470.0000.3195No
38TBC1D3P5TBC1 domain family member 3 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:43567]76250.0000.3066No
39CRYBA1crystallin beta A1 [Source:HGNC Symbol;Acc:HGNC:2394]85970.0000.2803No
40PDLIM1P3PDZ and LIM domain 1 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:48946]96120.0000.2529No
41KRT17P3keratin 17 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:33697]98720.0000.2459No
42RNY4P13RNY4 pseudogene 13 [Source:HGNC Symbol;Acc:HGNC:34063]101380.0000.2387No
43RPS29P22ribosomal protein S29 pseudogene 22 [Source:HGNC Symbol;Acc:HGNC:35799]105110.0000.2286No
44CPDP1carboxypeptidase D pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:53102]106300.0000.2254No
45RHBDL3rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]112970.0000.2074No
46LGALS9DPgalectin 9D, pseudogene [Source:HGNC Symbol;Acc:HGNC:49896]120450.0000.1872No
47ABHD15-AS1ABHD15 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49685]120970.0000.1858No
48RNU4-34PRNA, U4 small nuclear 34, pseudogene [Source:HGNC Symbol;Acc:HGNC:46970]121880.0000.1834No
49RNU6-298PRNA, U6 small nuclear 298, pseudogene [Source:HGNC Symbol;Acc:HGNC:47261]123220.0000.1798No
50AC024267.4novel transcript, antisense to PHF12125480.0000.1737No
51SMURF2P1SMAD specific E3 ubiquitin protein ligase 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:44402]126250.0000.1716No
52VTNvitronectin [Source:HGNC Symbol;Acc:HGNC:12724]131650.0000.1570No
53ALOX12P1arachidonate 12-lipoxygenase pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:431]139560.0000.1357No
54LRRC37BP1leucine rich repeat containing 37B pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:25390]154920.0000.0941No
55DPRXP4divergent-paired related homeobox pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:32170]157530.0000.0871No
56RPL31P58ribosomal protein L31 pseudogene 58 [Source:HGNC Symbol;Acc:HGNC:35862]160280.0000.0797No
57SNORA70small nucleolar RNA, H/ACA box 70 [Source:HGNC Symbol;Acc:HGNC:10231]160550.0000.0790No
58RN7SL316PRNA, 7SL, cytoplasmic 316, pseudogene [Source:HGNC Symbol;Acc:HGNC:46332]162080.0000.0749No
59PPY2Ppancreatic polypeptide 2, pseudogene [Source:HGNC Symbol;Acc:HGNC:9328]165740.0000.0650No
60SLC13A2solute carrier family 13 member 2 [Source:HGNC Symbol;Acc:HGNC:10917]171440.0000.0496No
61RNA5SP437RNA, 5S ribosomal pseudogene 437 [Source:HGNC Symbol;Acc:HGNC:43337]172690.0000.0462No
62RN7SL138PRNA, 7SL, cytoplasmic 138, pseudogene [Source:HGNC Symbol;Acc:HGNC:46154]183640.0000.0166No
63RN7SL45PRNA, 7SL, cytoplasmic 45, pseudogene [Source:HGNC Symbol;Acc:HGNC:46061]190000.000-0.0006No
64MIR193AmicroRNA 193a [Source:HGNC Symbol;Acc:HGNC:31563]191050.000-0.0034No
65PROCA1protein interacting with cyclin A1 [Source:HGNC Symbol;Acc:HGNC:28600]204530.000-0.0398No
66KRT18P55keratin 18 pseudogene 55 [Source:HGNC Symbol;Acc:HGNC:26874]205400.000-0.0422No
67FOXN1forkhead box N1 [Source:HGNC Symbol;Acc:HGNC:12765]205450.000-0.0423No
68SPACA3sperm acrosome associated 3 [Source:HGNC Symbol;Acc:HGNC:16260]212330.000-0.0608No
69PYY2peptide YY 2 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:9749]217950.000-0.0760No
70PIPOXpipecolic acid and sarcosine oxidase [Source:HGNC Symbol;Acc:HGNC:17804]220150.000-0.0820No
71MIR4523microRNA 4523 [Source:HGNC Symbol;Acc:HGNC:41583]226580.000-0.0993No
72TIAF1TGFB1-induced anti-apoptotic factor 1 [Source:HGNC Symbol;Acc:HGNC:11803]227780.000-0.1026No
73ARGFXP2arginine-fifty homeobox pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:23977]228040.000-0.1032No
74AC116407.1novel transcript, antisense to RHOT1228740.000-0.1051No
75RNU6-1267PRNA, U6 small nuclear 1267, pseudogene [Source:HGNC Symbol;Acc:HGNC:48230]236310.000-0.1256No
76TBC1D29PTBC1 domain family member 29, pseudogene [Source:HGNC Symbol;Acc:HGNC:24509]237280.000-0.1281No
77LRRC37Bleucine rich repeat containing 37B [Source:HGNC Symbol;Acc:HGNC:29070]240490.000-0.1368No
78GTF2IP6general transcription factor IIi pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:51718]241750.000-0.1402No
79H3P41H3 histone pseudogene 41 [Source:HGNC Symbol;Acc:HGNC:42979]242100.000-0.1411No
80SNORD42Asmall nucleolar RNA, C/D box 42A [Source:HGNC Symbol;Acc:HGNC:10180]242510.000-0.1422No
81SNORD42Bsmall nucleolar RNA, C/D box 42B [Source:HGNC Symbol;Acc:HGNC:10181]242520.000-0.1422No
82SEBOXSEBOX homeobox [Source:HGNC Symbol;Acc:HGNC:32942]242530.000-0.1422No
83TMIGD1transmembrane and immunoglobulin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:32431]243200.000-0.1440No
84MIR4733microRNA 4733 [Source:HGNC Symbol;Acc:HGNC:41638]244580.000-0.1477No
85MIR4725microRNA 4725 [Source:HGNC Symbol;Acc:HGNC:41608]244840.000-0.1484No
86MIR4724microRNA 4724 [Source:HGNC Symbol;Acc:HGNC:41590]244910.000-0.1485No
87MIR4723microRNA 4723 [Source:HGNC Symbol;Acc:HGNC:41660]244920.000-0.1485No
88RNU6-1034PRNA, U6 small nuclear 1034, pseudogene [Source:HGNC Symbol;Acc:HGNC:47997]245620.000-0.1504No
89LINC01992long intergenic non-protein coding RNA 1992 [Source:HGNC Symbol;Acc:HGNC:52824]250620.000-0.1639No
90RN7SL79PRNA, 7SL, cytoplasmic 79, pseudogene [Source:HGNC Symbol;Acc:HGNC:46095]254010.000-0.1730No
91OOSP1P2oocyte secreted protein 1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:49241]254050.000-0.1731No
92RNU6ATAC7PRNA, U6atac small nuclear 7, pseudogene [Source:HGNC Symbol;Acc:HGNC:46906]254360.000-0.1739No
93RNU6-711PRNA, U6 small nuclear 711, pseudogene [Source:HGNC Symbol;Acc:HGNC:47674]264260.000-0.2007No
94RNU6-990PRNA, U6 small nuclear 990, pseudogene [Source:HGNC Symbol;Acc:HGNC:47953]266350.000-0.2063No
95SARM1sterile alpha and TIR motif containing 1 [Source:HGNC Symbol;Acc:HGNC:17074]266410.000-0.2065No
96RNU6-1134PRNA, U6 small nuclear 1134, pseudogene [Source:HGNC Symbol;Acc:HGNC:48097]270710.000-0.2181No
97SNORD4Bsmall nucleolar RNA, C/D box 4B [Source:HGNC Symbol;Acc:HGNC:10098]272370.000-0.2225No
98SNORD4Asmall nucleolar RNA, C/D box 4A [Source:HGNC Symbol;Acc:HGNC:10097]272390.000-0.2226No
99SNORD63small nucleolar RNA, C/D box 63 [Source:HGNC Symbol;Acc:HGNC:10220]272670.000-0.2233No
100MIR632microRNA 632 [Source:HGNC Symbol;Acc:HGNC:32888]273190.000-0.2247No
101MIR365BmicroRNA 365b [Source:HGNC Symbol;Acc:HGNC:33693]275100.000-0.2298No
102RNU6-920PRNA, U6 small nuclear 920, pseudogene [Source:HGNC Symbol;Acc:HGNC:47883]275690.000-0.2314No
103RAB11FIP4RAB11 family interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30267]28481-0.089-0.2552No
104COPRScoordinator of PRMT5 and differentiation stimulator [Source:HGNC Symbol;Acc:HGNC:28848]28619-0.132-0.2577No
105SDF2stromal cell derived factor 2 [Source:HGNC Symbol;Acc:HGNC:10675]28966-0.228-0.2650No
106TEFMtranscription elongation factor, mitochondrial [Source:HGNC Symbol;Acc:HGNC:26223]29051-0.246-0.2650No
107ANKRD13Bankyrin repeat domain 13B [Source:HGNC Symbol;Acc:HGNC:26363]29495-0.362-0.2737No
108PHF12PHD finger protein 12 [Source:HGNC Symbol;Acc:HGNC:20816]29615-0.394-0.2734No
109SSH2slingshot protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:30580]29908-0.458-0.2771No
110RPS7P1ribosomal protein S7 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:17081]30521-0.613-0.2881No
111PIGSphosphatidylinositol glycan anchor biosynthesis class S [Source:HGNC Symbol;Acc:HGNC:14937]31068-0.773-0.2958No
112KSR1kinase suppressor of ras 1 [Source:HGNC Symbol;Acc:HGNC:6465]31227-0.822-0.2926No
113TMEM97transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]31439-0.871-0.2904No
114GIT1GIT ArfGAP 1 [Source:HGNC Symbol;Acc:HGNC:4272]31444-0.873-0.2826No
115SYPL1P2synaptophysin like 1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:53547]31455-0.878-0.2749No
116RHOT1ras homolog family member T1 [Source:HGNC Symbol;Acc:HGNC:21168]32063-1.092-0.2814No
117POLDIP2DNA polymerase delta interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:23781]32238-1.141-0.2757No
118C17orf75chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:30173]32252-1.151-0.2656No
119SUZ12SUZ12 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]32444-1.229-0.2595No
120ABHD15abhydrolase domain containing 15 [Source:HGNC Symbol;Acc:HGNC:26971]32714-1.330-0.2547No
121MYO18Amyosin XVIIIA [Source:HGNC Symbol;Acc:HGNC:31104]32730-1.338-0.2429No
122FLOT2flotillin 2 [Source:HGNC Symbol;Acc:HGNC:3758]32931-1.437-0.2353No
123DHRS13dehydrogenase/reductase 13 [Source:HGNC Symbol;Acc:HGNC:28326]33670-1.674-0.2400No
124SPAG5-AS1SPAG5 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41140]33820-1.740-0.2282No
125ATAD5ATPase family AAA domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25752]33876-1.766-0.2136No
126NF1neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]33888-1.776-0.1978No
127KIAA0100KIAA0100 [Source:HGNC Symbol;Acc:HGNC:28960]34220-1.941-0.1891No
128ALDOCaldolase, fructose-bisphosphate C [Source:HGNC Symbol;Acc:HGNC:418]34329-2.008-0.1737No
129SUZ12P1SUZ12 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:32421]34392-2.030-0.1569No
130TP53I13tumor protein p53 inducible protein 13 [Source:HGNC Symbol;Acc:HGNC:25102]35286-2.580-0.1576No
131OMGoligodendrocyte myelin glycoprotein [Source:HGNC Symbol;Acc:HGNC:8135]35522-2.761-0.1389No
132SPAG5sperm associated antigen 5 [Source:HGNC Symbol;Acc:HGNC:13452]35557-2.803-0.1143No
133RAB34RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]35825-3.007-0.0941No
134UNC119unc-119 lipid binding chaperone [Source:HGNC Symbol;Acc:HGNC:12565]35827-3.008-0.0668No
135TLCD1TLC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25177]36166-3.371-0.0453No
136TRAF4TNF receptor associated factor 4 [Source:HGNC Symbol;Acc:HGNC:12034]36554-3.790-0.0212No
137CORO6coronin 6 [Source:HGNC Symbol;Acc:HGNC:21356]36648-3.9250.0120No
Table: GSEA details [plain text format]



Fig 2: CHR17Q11   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR17Q11: Random ES distribution   
Gene set null distribution of ES for CHR17Q11