Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetCHR1P35
Enrichment Score (ES)0.41223767
Normalized Enrichment Score (NES)1.0519019
Nominal p-value0.23529412
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR1P35   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1MARCKSL1MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]1634.3160.0340Yes
2PTAFRplatelet activating factor receptor [Source:HGNC Symbol;Acc:HGNC:9582]2364.0500.0682Yes
3FGRFGR proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3697]4533.3270.0920Yes
4RNF19Bring finger protein 19B [Source:HGNC Symbol;Acc:HGNC:26886]5103.1780.1188Yes
5XKR8XK related 8 [Source:HGNC Symbol;Acc:HGNC:25508]6322.9360.1417Yes
6LCKLCK proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6524]6922.8120.1651Yes
7ATP5IF1ATP synthase inhibitory factor subunit 1 [Source:HGNC Symbol;Acc:HGNC:871]7672.6580.1868Yes
8SNORA73Bsmall nucleolar RNA, H/ACA box 73B [Source:HGNC Symbol;Acc:HGNC:10116]8632.5720.2071Yes
9THEMIS2thymocyte selection associated family member 2 [Source:HGNC Symbol;Acc:HGNC:16839]9972.3390.2244Yes
10SESN2sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]10722.2330.2423Yes
11SERINC2serine incorporator 2 [Source:HGNC Symbol;Acc:HGNC:23231]11072.1850.2608Yes
12MECRmitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]11312.1480.2793Yes
13EYA3EYA transcriptional coactivator and phosphatase 3 [Source:HGNC Symbol;Acc:HGNC:3521]12152.0450.2953Yes
14PHC2polyhomeotic homolog 2 [Source:HGNC Symbol;Acc:HGNC:3183]12801.9730.3112Yes
15SMPDL3Bsphingomyelin phosphodiesterase acid like 3B [Source:HGNC Symbol;Acc:HGNC:21416]14351.8030.3231Yes
16SNHG3small nucleolar RNA host gene 3 [Source:HGNC Symbol;Acc:HGNC:10118]15421.8020.3362Yes
17HPCAhippocalcin [Source:HGNC Symbol;Acc:HGNC:5144]17131.6350.3462Yes
18SELENOWP1selenoprotein W pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:10753]17181.6320.3606Yes
19STX12syntaxin 12 [Source:HGNC Symbol;Acc:HGNC:11430]17991.5700.3725Yes
20BSDC1BSD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25501]19691.4560.3809Yes
21PHACTR4phosphatase and actin regulator 4 [Source:HGNC Symbol;Acc:HGNC:25793]23801.1880.3804Yes
22ZSCAN20zinc finger and SCAN domain containing 20 [Source:HGNC Symbol;Acc:HGNC:13093]24341.1550.3892Yes
23HDAC1histone deacetylase 1 [Source:HGNC Symbol;Acc:HGNC:4852]26231.0780.3937Yes
24NKAIN1sodium/potassium transporting ATPase interacting 1 [Source:HGNC Symbol;Acc:HGNC:25743]28740.9560.3955Yes
25RCC1regulator of chromosome condensation 1 [Source:HGNC Symbol;Acc:HGNC:1913]29850.9010.4005Yes
26GMEB1glucocorticoid modulatory element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4370]32330.8110.4011Yes
27SNRNP40small nuclear ribonucleoprotein U5 subunit 40 [Source:HGNC Symbol;Acc:HGNC:30857]36850.6400.3946Yes
28ZCCHC17zinc finger CCHC-type containing 17 [Source:HGNC Symbol;Acc:HGNC:30246]37060.6320.3997Yes
29TSSK3testis specific serine kinase 3 [Source:HGNC Symbol;Acc:HGNC:15473]37610.6160.4037Yes
30IQCCIQ motif containing C [Source:HGNC Symbol;Acc:HGNC:25545]37770.6060.4087Yes
31KPNA6karyopherin subunit alpha 6 [Source:HGNC Symbol;Acc:HGNC:6399]38400.5840.4122Yes
32AK2adenylate kinase 2 [Source:HGNC Symbol;Acc:HGNC:362]45910.3420.3950No
33TXLNAtaxilin alpha [Source:HGNC Symbol;Acc:HGNC:30685]46220.3340.3972No
34YARS1tyrosyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:12840]47480.3010.3965No
35TRNAU1APtRNA selenocysteine 1 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:30813]47720.2940.3985No
36YTHDF2YTH N6-methyladenosine RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:31675]47860.2890.4007No
37PUM1pumilio RNA binding family member 1 [Source:HGNC Symbol;Acc:HGNC:14957]52350.1610.3900No
38GAPDHP20glyceraldehyde 3 phosphate dehydrogenase pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:37772]52960.1530.3897No
39EIF3Ieukaryotic translation initiation factor 3 subunit I [Source:HGNC Symbol;Acc:HGNC:3272]60350.0290.3700No
40TAF12TATA-box binding protein associated factor 12 [Source:HGNC Symbol;Acc:HGNC:11545]60390.0280.3702No
41RNU6-176PRNA, U6 small nuclear 176, pseudogene [Source:HGNC Symbol;Acc:HGNC:47139]69090.0000.3467No
42LINC01648long intergenic non-protein coding RNA 1648 [Source:HGNC Symbol;Acc:HGNC:52435]71070.0000.3414No
43SCARNA1small Cajal body-specific RNA 1 [Source:HGNC Symbol;Acc:HGNC:32555]76710.0000.3261No
44LINC01226long intergenic non-protein coding RNA 1226 [Source:HGNC Symbol;Acc:HGNC:49678]84030.0000.3064No
45CSMD2-AS1CSMD2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40882]87350.0000.2974No
46OPRD1opioid receptor delta 1 [Source:HGNC Symbol;Acc:HGNC:8153]89250.0000.2923No
47MIR4420microRNA 4420 [Source:HGNC Symbol;Acc:HGNC:41772]91370.0000.2866No
48HCRTR1hypocretin receptor 1 [Source:HGNC Symbol;Acc:HGNC:4848]91650.0000.2859No
49RNU6-949PRNA, U6 small nuclear 949, pseudogene [Source:HGNC Symbol;Acc:HGNC:47912]93690.0000.2804No
50TLR12Ptoll like receptor 12, pseudogene [Source:HGNC Symbol;Acc:HGNC:31754]95490.0000.2755No
51A3GALT2alpha 1,3-galactosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:30005]121500.0000.2052No
52MTMR9LPmyotubularin related protein 9 like, pseudogene [Source:HGNC Symbol;Acc:HGNC:27920]153330.0000.1191No
53RN7SL559PRNA, 7SL, cytoplasmic 559, pseudogene [Source:HGNC Symbol;Acc:HGNC:46575]155780.0000.1125No
54SNORA44small nucleolar RNA, H/ACA box 44 [Source:HGNC Symbol;Acc:HGNC:32637]160370.0000.1001No
55CSMD2CUB and Sushi multiple domains 2 [Source:HGNC Symbol;Acc:HGNC:19290]160810.0000.0990No
56TMEM200Btransmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]162550.0000.0943No
57RNU6-424PRNA, U6 small nuclear 424, pseudogene [Source:HGNC Symbol;Acc:HGNC:47387]162660.0000.0940No
58COL16A1collagen type XVI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2193]163930.0000.0906No
59SPOCD1SPOC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26338]169050.0000.0768No
60RAB42RAB42, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:28702]171060.0000.0714No
61RNU6ATAC27PRNA, U6atac small nuclear 27, pseudogene [Source:HGNC Symbol;Acc:HGNC:46926]179500.0000.0486No
62RN7SL122PRNA, 7SL, cytoplasmic 122, pseudogene [Source:HGNC Symbol;Acc:HGNC:46138]180950.0000.0447No
63RN7SKP16RN7SK pseudogene 16 [Source:HGNC Symbol;Acc:HGNC:45740]185950.0000.0312No
64RN7SKP91RN7SK pseudogene 91 [Source:HGNC Symbol;Acc:HGNC:45815]187000.0000.0284No
65LINC01756long intergenic non-protein coding RNA 1756 [Source:HGNC Symbol;Acc:HGNC:52545]199470.000-0.0053No
66LINC01715long intergenic non-protein coding RNA 1715 [Source:HGNC Symbol;Acc:HGNC:52502]200150.000-0.0071No
67HMGB4high mobility group box 4 [Source:HGNC Symbol;Acc:HGNC:24954]207400.000-0.0267No
68ADGRB2adhesion G protein-coupled receptor B2 [Source:HGNC Symbol;Acc:HGNC:944]213020.000-0.0419No
69C1orf94chromosome 1 open reading frame 94 [Source:HGNC Symbol;Acc:HGNC:28250]214280.000-0.0453No
70MATN1matrilin 1 [Source:HGNC Symbol;Acc:HGNC:6907]227600.000-0.0813No
71FNDC5fibronectin type III domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20240]230430.000-0.0889No
72DCDC2Bdoublecortin domain containing 2B [Source:HGNC Symbol;Acc:HGNC:32576]231730.000-0.0924No
73RNU6-1245PRNA, U6 small nuclear 1245, pseudogene [Source:HGNC Symbol;Acc:HGNC:48208]233500.000-0.0972No
74RNA5SP42RNA, 5S ribosomal pseudogene 42 [Source:HGNC Symbol;Acc:HGNC:42818]233880.000-0.0982No
75MIR4254microRNA 4254 [Source:HGNC Symbol;Acc:HGNC:38193]234060.000-0.0986No
76MATN1-AS1MATN1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40364]235620.000-0.1028No
77ZBTB8Bzinc finger and BTB domain containing 8B [Source:HGNC Symbol;Acc:HGNC:37057]240720.000-0.1166No
78LINC01778long intergenic non-protein coding RNA 1778 [Source:HGNC Symbol;Acc:HGNC:52568]247290.000-0.1343No
79TMEM54transmembrane protein 54 [Source:HGNC Symbol;Acc:HGNC:24143]249180.000-0.1394No
80RN7SL371PRNA, 7SL, cytoplasmic 371, pseudogene [Source:HGNC Symbol;Acc:HGNC:46387]252900.000-0.1495No
81IFI6interferon alpha inducible protein 6 [Source:HGNC Symbol;Acc:HGNC:4054]254000.000-0.1524No
82MIR5585microRNA 5585 [Source:HGNC Symbol;Acc:HGNC:43452]268220.000-0.1908No
83SNORD99small nucleolar RNA, C/D box 99 [Source:HGNC Symbol;Acc:HGNC:32762]272730.000-0.2030No
84MIR3605microRNA 3605 [Source:HGNC Symbol;Acc:HGNC:38922]273450.000-0.2049No
85RNU6-40PRNA, U6 small nuclear 40, pseudogene [Source:HGNC Symbol;Acc:HGNC:34248]274000.000-0.2064No
86LRRC37A12Pleucine rich repeat containing 37 member A12, pseudogene [Source:HGNC Symbol;Acc:HGNC:43816]281460.000-0.2265No
87TMEM39Btransmembrane protein 39B [Source:HGNC Symbol;Acc:HGNC:25510]28250-0.022-0.2291No
88PPP1R8protein phosphatase 1 regulatory subunit 8 [Source:HGNC Symbol;Acc:HGNC:9296]28361-0.053-0.2316No
89PEF1penta-EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30009]28655-0.141-0.2383No
90SPCS2P4signal peptidase complex subunit 2 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:45237]28668-0.144-0.2374No
91SYNCsyncoilin, intermediate filament protein [Source:HGNC Symbol;Acc:HGNC:28897]28968-0.229-0.2434No
92FAM229Afamily with sequence similarity 229 member A [Source:HGNC Symbol;Acc:HGNC:44652]29188-0.283-0.2468No
93SRSF4serine and arginine rich splicing factor 4 [Source:HGNC Symbol;Acc:HGNC:10786]29755-0.420-0.2584No
94TINAGL1tubulointerstitial nephritis antigen like 1 [Source:HGNC Symbol;Acc:HGNC:19168]29792-0.429-0.2555No
95HSPD1P14heat shock protein family D (Hsp60) member 1 pseudogene 14 [Source:HGNC Symbol;Acc:HGNC:35143]30026-0.490-0.2574No
96SNHG12small nucleolar RNA host gene 12 [Source:HGNC Symbol;Acc:HGNC:30062]30061-0.500-0.2539No
97KHDRBS1KH RNA binding domain containing, signal transduction associated 1 [Source:HGNC Symbol;Acc:HGNC:18116]30405-0.581-0.2580No
98ZBTB8OSzinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094]30433-0.589-0.2535No
99PRDX3P2peroxiredoxin 3 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39265]30465-0.596-0.2490No
100PTP4A2protein tyrosine phosphatase 4A2 [Source:HGNC Symbol;Acc:HGNC:9635]30624-0.640-0.2476No
101TMEM234transmembrane protein 234 [Source:HGNC Symbol;Acc:HGNC:28837]31275-0.840-0.2577No
102MED18mediator complex subunit 18 [Source:HGNC Symbol;Acc:HGNC:25944]31562-0.914-0.2573No
103CCDC28Bcoiled-coil domain containing 28B [Source:HGNC Symbol;Acc:HGNC:28163]31753-0.979-0.2537No
104AHDC1AT-hook DNA binding motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25230]32519-1.258-0.2632No
105SDC3syndecan 3 [Source:HGNC Symbol;Acc:HGNC:10660]32727-1.337-0.2569No
106FABP3fatty acid binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3557]32735-1.343-0.2451No
107EPB41erythrocyte membrane protein band 4.1 [Source:HGNC Symbol;Acc:HGNC:3377]32901-1.423-0.2369No
108RPA2replication protein A2 [Source:HGNC Symbol;Acc:HGNC:10290]33014-1.473-0.2268No
109RBBP4RB binding protein 4, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:9887]33409-1.558-0.2236No
110DNAJC8DnaJ heat shock protein family (Hsp40) member C8 [Source:HGNC Symbol;Acc:HGNC:15470]33817-1.739-0.2191No
111FAM167Bfamily with sequence similarity 167 member B [Source:HGNC Symbol;Acc:HGNC:28133]33869-1.763-0.2048No
112S100PBPS100P binding protein [Source:HGNC Symbol;Acc:HGNC:25768]34225-1.943-0.1971No
113PTPRUprotein tyrosine phosphatase receptor type U [Source:HGNC Symbol;Acc:HGNC:9683]34268-1.971-0.1806No
114RPEP3ribulose-5-phosphate-3-epimerase pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:44522]34281-1.978-0.1634No
115FAM76Afamily with sequence similarity 76 member A [Source:HGNC Symbol;Acc:HGNC:28530]34318-2.002-0.1465No
116LAPTM5lysosomal protein transmembrane 5 [Source:HGNC Symbol;Acc:HGNC:29612]34561-2.127-0.1341No
117CHMP1AP1charged multivesicular body protein 1A pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:39514]35411-2.670-0.1333No
118TRIM62tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]35655-2.900-0.1140No
119ZBTB8Azinc finger and BTB domain containing 8A [Source:HGNC Symbol;Acc:HGNC:24172]36548-3.784-0.1044No
120KIAA1522KIAA1522 [Source:HGNC Symbol;Acc:HGNC:29301]36871-4.292-0.0749No
121AZIN2antizyme inhibitor 2 [Source:HGNC Symbol;Acc:HGNC:29957]36940-4.454-0.0370No
122ZNF362zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]36989-4.6100.0027No
Table: GSEA details [plain text format]



Fig 2: CHR1P35   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR1P35: Random ES distribution   
Gene set null distribution of ES for CHR1P35