Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #WT_LPS_versus_WT_NA.Nof1.cls #WT_LPS_versus_WT_NA_repos |
| Phenotype | Nof1.cls#WT_LPS_versus_WT_NA_repos |
| Upregulated in class | WT_LPS |
| GeneSet | CHR2Q36 |
| Enrichment Score (ES) | 0.5515849 |
| Normalized Enrichment Score (NES) | 1.3128924 |
| Nominal p-value | 0.026455026 |
| FDR q-value | 0.38657618 |
| FWER p-Value | 0.8 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | AP1S3 | adaptor related protein complex 1 subunit sigma 3 [Source:HGNC Symbol;Acc:HGNC:18971] | 377 | 3.537 | 0.1183 | Yes |
| 2 | SCG2 | secretogranin II [Source:HGNC Symbol;Acc:HGNC:10575] | 933 | 2.456 | 0.1926 | Yes |
| 3 | DOCK10 | dedicator of cytokinesis 10 [Source:HGNC Symbol;Acc:HGNC:23479] | 1105 | 2.187 | 0.2674 | Yes |
| 4 | TRIP12 | thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306] | 1389 | 1.852 | 0.3271 | Yes |
| 5 | WDFY1 | WD repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20451] | 1675 | 1.663 | 0.3798 | Yes |
| 6 | PID1 | phosphotyrosine interaction domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26084] | 2087 | 1.376 | 0.4187 | Yes |
| 7 | RHBDD1 | rhomboid domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23081] | 2210 | 1.295 | 0.4625 | Yes |
| 8 | SNRPGP8 | small nuclear ribonucleoprotein polypeptide G pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:39327] | 2476 | 1.146 | 0.4969 | Yes |
| 9 | MRPL44 | mitochondrial ribosomal protein L44 [Source:HGNC Symbol;Acc:HGNC:16650] | 2573 | 1.106 | 0.5346 | Yes |
| 10 | PAX3 | paired box 3 [Source:HGNC Symbol;Acc:HGNC:8617] | 3320 | 0.775 | 0.5426 | Yes |
| 11 | FARSB | phenylalanyl-tRNA synthetase subunit beta [Source:HGNC Symbol;Acc:HGNC:17800] | 3989 | 0.539 | 0.5441 | Yes |
| 12 | HSPA9P1 | heat shock protein family A (Hsp70) member 9 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:24915] | 4365 | 0.405 | 0.5487 | Yes |
| 13 | AGFG1 | ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175] | 4686 | 0.317 | 0.5516 | Yes |
| 14 | CCL20 | C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619] | 6220 | 0.000 | 0.5102 | No |
| 15 | TM4SF20 | transmembrane 4 L six family member 20 [Source:HGNC Symbol;Acc:HGNC:26230] | 6955 | 0.000 | 0.4904 | No |
| 16 | TDGF1P2 | teratocarcinoma-derived growth factor 1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:11702] | 7019 | 0.000 | 0.4887 | No |
| 17 | EPHA4 | EPH receptor A4 [Source:HGNC Symbol;Acc:HGNC:3388] | 7283 | 0.000 | 0.4816 | No |
| 18 | HIGD1AP4 | HIG1 hypoxia inducible domain family member 1A pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:43000] | 8073 | 0.000 | 0.4603 | No |
| 19 | SPHKAP | SPHK1 interactor, AKAP domain containing [Source:HGNC Symbol;Acc:HGNC:30619] | 9223 | 0.000 | 0.4292 | No |
| 20 | KCNE4 | potassium voltage-gated channel subfamily E regulatory subunit 4 [Source:HGNC Symbol;Acc:HGNC:6244] | 9660 | 0.000 | 0.4175 | No |
| 21 | RNY4P19 | RNY4 pseudogene 19 [Source:HGNC Symbol;Acc:HGNC:34069] | 10150 | 0.000 | 0.4042 | No |
| 22 | GAPDHP49 | glyceraldehyde 3 phosphate dehydrogenase pseudogene 49 [Source:HGNC Symbol;Acc:HGNC:38555] | 10787 | 0.000 | 0.3871 | No |
| 23 | FBXO36-IT1 | FBXO36 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41489] | 11266 | 0.000 | 0.3742 | No |
| 24 | NYAP2 | neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 [Source:HGNC Symbol;Acc:HGNC:29291] | 11284 | 0.000 | 0.3737 | No |
| 25 | RN7SL807P | RNA, 7SL, cytoplasmic 807, pseudogene [Source:HGNC Symbol;Acc:HGNC:46823] | 12836 | 0.000 | 0.3318 | No |
| 26 | MIR5702 | microRNA 5702 [Source:HGNC Symbol;Acc:HGNC:43503] | 15224 | 0.000 | 0.2674 | No |
| 27 | MIR5703 | microRNA 5703 [Source:HGNC Symbol;Acc:HGNC:43475] | 15225 | 0.000 | 0.2674 | No |
| 28 | RNU7-9P | RNA, U7 small nuclear 9 pseudogene [Source:HGNC Symbol;Acc:HGNC:34105] | 15522 | 0.000 | 0.2594 | No |
| 29 | RNU6-619P | RNA, U6 small nuclear 619, pseudogene [Source:HGNC Symbol;Acc:HGNC:47582] | 17279 | 0.000 | 0.2120 | No |
| 30 | RNU6-613P | RNA, U6 small nuclear 613, pseudogene [Source:HGNC Symbol;Acc:HGNC:47576] | 17323 | 0.000 | 0.2108 | No |
| 31 | RNU6-624P | RNA, U6 small nuclear 624, pseudogene [Source:HGNC Symbol;Acc:HGNC:47587] | 17714 | 0.000 | 0.2003 | No |
| 32 | SERPINE2 | serpin family E member 2 [Source:HGNC Symbol;Acc:HGNC:8951] | 17727 | 0.000 | 0.1999 | No |
| 33 | SGPP2 | sphingosine-1-phosphate phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:19953] | 17964 | 0.000 | 0.1936 | No |
| 34 | RN7SKP283 | RN7SK pseudogene 283 [Source:HGNC Symbol;Acc:HGNC:46007] | 17986 | 0.000 | 0.1930 | No |
| 35 | TMEM256P2 | transmembrane protein 256 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:45088] | 18250 | 0.000 | 0.1859 | No |
| 36 | RPL7L1P10 | ribosomal protein L7 like 1 pseudogene 10 [Source:HGNC Symbol;Acc:HGNC:39492] | 18267 | 0.000 | 0.1855 | No |
| 37 | MOGAT1 | monoacylglycerol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:18210] | 18997 | 0.000 | 0.1658 | No |
| 38 | RNA5SP121 | RNA, 5S ribosomal pseudogene 121 [Source:HGNC Symbol;Acc:HGNC:42919] | 19045 | 0.000 | 0.1645 | No |
| 39 | LINC01807 | long intergenic non-protein coding RNA 1807 [Source:HGNC Symbol;Acc:HGNC:52610] | 19841 | 0.000 | 0.1430 | No |
| 40 | FAM124B | family with sequence similarity 124 member B [Source:HGNC Symbol;Acc:HGNC:26224] | 20117 | 0.000 | 0.1356 | No |
| 41 | NANOGP2 | Nanog homeobox pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:23100] | 20152 | 0.000 | 0.1347 | No |
| 42 | ATG12P2 | autophagy related 12 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:38605] | 21271 | 0.000 | 0.1045 | No |
| 43 | MIR4439 | microRNA 4439 [Source:HGNC Symbol;Acc:HGNC:41622] | 22725 | 0.000 | 0.0653 | No |
| 44 | DAW1 | dynein assembly factor with WD repeats 1 [Source:HGNC Symbol;Acc:HGNC:26383] | 22883 | 0.000 | 0.0610 | No |
| 45 | CCDC140 | CCDC140 long non-coding RNA [Source:HGNC Symbol;Acc:HGNC:26514] | 23137 | 0.000 | 0.0542 | No |
| 46 | CCDC195 | coiled-coil domain containing 195 [Source:HGNC Symbol;Acc:HGNC:53441] | 23163 | 0.000 | 0.0535 | No |
| 47 | RNU6-1027P | RNA, U6 small nuclear 1027, pseudogene [Source:HGNC Symbol;Acc:HGNC:47990] | 24647 | 0.000 | 0.0135 | No |
| 48 | COL4A4 | collagen type IV alpha 4 chain [Source:HGNC Symbol;Acc:HGNC:2206] | 25454 | 0.000 | -0.0083 | No |
| 49 | COL4A3 | collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204] | 25455 | 0.000 | -0.0083 | No |
| 50 | RNU6-964P | RNA, U6 small nuclear 964, pseudogene [Source:HGNC Symbol;Acc:HGNC:47927] | 26015 | 0.000 | -0.0234 | No |
| 51 | C2orf83 | chromosome 2 open reading frame 83 [Source:HGNC Symbol;Acc:HGNC:25344] | 26261 | 0.000 | -0.0300 | No |
| 52 | IRS1 | insulin receptor substrate 1 [Source:HGNC Symbol;Acc:HGNC:6125] | 26648 | 0.000 | -0.0404 | No |
| 53 | SLC19A3 | solute carrier family 19 member 3 [Source:HGNC Symbol;Acc:HGNC:16266] | 28088 | 0.000 | -0.0793 | No |
| 54 | MFF | mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858] | 28936 | -0.219 | -0.0942 | No |
| 55 | CUL3 | cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553] | 29207 | -0.289 | -0.0910 | No |
| 56 | RPL23AP28 | ribosomal protein L23a pseudogene 28 [Source:HGNC Symbol;Acc:HGNC:36727] | 30326 | -0.563 | -0.1007 | No |
| 57 | SLC16A14 | solute carrier family 16 member 14 [Source:HGNC Symbol;Acc:HGNC:26417] | 31424 | -0.866 | -0.0989 | No |
| 58 | ACSL3 | acyl-CoA synthetase long chain family member 3 [Source:HGNC Symbol;Acc:HGNC:3570] | 34713 | -2.228 | -0.1067 | No |
| 59 | FBXO36 | F-box protein 36 [Source:HGNC Symbol;Acc:HGNC:27020] | 34861 | -2.320 | -0.0264 | No |
| 60 | DNER | delta/notch like EGF repeat containing [Source:HGNC Symbol;Acc:HGNC:24456] | 34982 | -2.383 | 0.0569 | No |
