Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetCROONQUIST_NRAS_SIGNALING_DN
Enrichment Score (ES)-0.82991934
Normalized Enrichment Score (NES)-1.6823348
Nominal p-value0.0
FDR q-value0.002223426
FWER p-Value0.019
Table: GSEA Results Summary



Fig 1: Enrichment plot: CROONQUIST_NRAS_SIGNALING_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1EIF5eukaryotic translation initiation factor 5 [Source:HGNC Symbol;Acc:HGNC:3299]31820.826-0.0809No
2HMGA1high mobility group AT-hook 1 [Source:HGNC Symbol;Acc:HGNC:5010]31880.824-0.0761No
3SBNO2strawberry notch homolog 2 [Source:HGNC Symbol;Acc:HGNC:29158]33460.761-0.0757No
4GNAI1G protein subunit alpha i1 [Source:HGNC Symbol;Acc:HGNC:4384]34170.733-0.0731No
5SNRPA1small nuclear ribonucleoprotein polypeptide A' [Source:HGNC Symbol;Acc:HGNC:11152]45940.341-0.1028No
6APOBEC3Bapolipoprotein B mRNA editing enzyme catalytic subunit 3B [Source:HGNC Symbol;Acc:HGNC:17352]123590.000-0.3125No
7ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]233600.000-0.6096No
8MYRFmyelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]28628-0.135-0.7511No
9PTTG1PTTG1 regulator of sister chromatid separation, securin [Source:HGNC Symbol;Acc:HGNC:9690]30207-0.543-0.7904No
10PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]31440-0.872-0.8184No
11CSE1Lchromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]31492-0.894-0.8143No
12RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]31736-0.972-0.8150No
13HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]31758-0.979-0.8096No
14CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]32153-1.113-0.8135No
15CDC25Ccell division cycle 25C [Source:HGNC Symbol;Acc:HGNC:1727]32283-1.166-0.8098No
16CENPAcentromere protein A [Source:HGNC Symbol;Acc:HGNC:1851]32379-1.207-0.8051No
17POLD3DNA polymerase delta 3, accessory subunit [Source:HGNC Symbol;Acc:HGNC:20932]32927-1.435-0.8111No
18MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]33403-1.555-0.8145No
19CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]33975-1.818-0.8189Yes
20PLOD2procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]33994-1.825-0.8082Yes
21BRD8bromodomain containing 8 [Source:HGNC Symbol;Acc:HGNC:19874]34042-1.851-0.7983Yes
22MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34046-1.854-0.7871Yes
23PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34181-1.920-0.7790Yes
24PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]34248-1.957-0.7689Yes
25CHAF1Achromatin assembly factor 1 subunit A [Source:HGNC Symbol;Acc:HGNC:1910]34259-1.967-0.7572Yes
26CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]34381-2.017-0.7482Yes
27BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]34617-2.156-0.7414Yes
28NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]34638-2.171-0.7288Yes
29POLD1DNA polymerase delta 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9175]34800-2.282-0.7192Yes
30TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]34811-2.286-0.7056Yes
31MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]34817-2.289-0.6918Yes
32RAD51CRAD51 paralog C [Source:HGNC Symbol;Acc:HGNC:9820]34859-2.317-0.6788Yes
33UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]34921-2.364-0.6661Yes
34GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]34947-2.382-0.6523Yes
35SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35054-2.393-0.6406Yes
36STILSTIL centriolar assembly protein [Source:HGNC Symbol;Acc:HGNC:10879]35121-2.440-0.6275Yes
37CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]35122-2.440-0.6127Yes
38CHEK1checkpoint kinase 1 [Source:HGNC Symbol;Acc:HGNC:1925]35152-2.473-0.5984Yes
39AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]35217-2.531-0.5848Yes
40TRIP13thyroid hormone receptor interactor 13 [Source:HGNC Symbol;Acc:HGNC:12307]35484-2.727-0.5754Yes
41CDC6cell division cycle 6 [Source:HGNC Symbol;Acc:HGNC:1744]35504-2.750-0.5591Yes
42SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]35524-2.765-0.5428Yes
43SPAG5sperm associated antigen 5 [Source:HGNC Symbol;Acc:HGNC:13452]35557-2.803-0.5267Yes
44NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]35559-2.806-0.5096Yes
45STMN1stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]35595-2.845-0.4933Yes
46MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]35624-2.879-0.4765Yes
47TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35635-2.889-0.4592Yes
48GPX4glutathione peroxidase 4 [Source:HGNC Symbol;Acc:HGNC:4556]35711-2.911-0.4435Yes
49GALEUDP-galactose-4-epimerase [Source:HGNC Symbol;Acc:HGNC:4116]35756-2.954-0.4267Yes
50TRAIPTRAF interacting protein [Source:HGNC Symbol;Acc:HGNC:30764]35797-2.987-0.4096Yes
51CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]35809-2.998-0.3917Yes
52OIP5Opa interacting protein 5 [Source:HGNC Symbol;Acc:HGNC:20300]35911-3.088-0.3757Yes
53PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]35969-3.152-0.3580Yes
54SPC25SPC25 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24031]36011-3.197-0.3397Yes
55PTP4A3protein tyrosine phosphatase 4A3 [Source:HGNC Symbol;Acc:HGNC:9636]36043-3.241-0.3208Yes
56KIF22kinesin family member 22 [Source:HGNC Symbol;Acc:HGNC:6391]36079-3.255-0.3020Yes
57CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36104-3.290-0.2826Yes
58AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36135-3.335-0.2631Yes
59KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36211-3.412-0.2444Yes
60MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36500-3.700-0.2297Yes
61FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36503-3.702-0.2072Yes
62H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36567-3.812-0.1857Yes
63CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36580-3.830-0.1628Yes
64MYBL2MYB proto-oncogene like 2 [Source:HGNC Symbol;Acc:HGNC:7548]36607-3.868-0.1399Yes
65KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]36610-3.875-0.1164Yes
66DUTdeoxyuridine triphosphatase [Source:HGNC Symbol;Acc:HGNC:3078]36711-3.993-0.0948Yes
67NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36726-4.014-0.0708Yes
68WEE1WEE1 G2 checkpoint kinase [Source:HGNC Symbol;Acc:HGNC:12761]36881-4.323-0.0486Yes
69CHEK2checkpoint kinase 2 [Source:HGNC Symbol;Acc:HGNC:16627]36935-4.445-0.0230Yes
70TK1thymidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11830]36948-4.4720.0038Yes
Table: GSEA details [plain text format]



Fig 2: CROONQUIST_NRAS_SIGNALING_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CROONQUIST_NRAS_SIGNALING_DN: Random ES distribution   
Gene set null distribution of ES for CROONQUIST_NRAS_SIGNALING_DN