Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetISHIDA_E2F_TARGETS
Enrichment Score (ES)-0.8398323
Normalized Enrichment Score (NES)-1.6395602
Nominal p-value0.0
FDR q-value0.012196918
FWER p-Value0.152
Table: GSEA Results Summary



Fig 1: Enrichment plot: ISHIDA_E2F_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ANXA8L1annexin A8 like 1 [Source:HGNC Symbol;Acc:HGNC:23334]269900.000-0.7287No
2PTTG1PTTG1 regulator of sister chromatid separation, securin [Source:HGNC Symbol;Acc:HGNC:9690]30207-0.543-0.8115No
3CDT1chromatin licensing and DNA replication factor 1 [Source:HGNC Symbol;Acc:HGNC:24576]30919-0.718-0.8253No
4PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]31440-0.872-0.8328Yes
5DCTPP1dCTP pyrophosphatase 1 [Source:HGNC Symbol;Acc:HGNC:28777]31700-0.964-0.8326Yes
6RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]31736-0.972-0.8263Yes
7HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]31758-0.979-0.8196Yes
8SLBPstem-loop binding protein [Source:HGNC Symbol;Acc:HGNC:10904]31894-1.023-0.8156Yes
9CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]32153-1.113-0.8143Yes
10KPNA2karyopherin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6395]32455-1.235-0.8132Yes
11FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]32691-1.323-0.8097Yes
12RAD51RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:9817]32989-1.461-0.8069Yes
13MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]33403-1.555-0.8064Yes
14DBF4DBF4 zinc finger [Source:HGNC Symbol;Acc:HGNC:17364]33929-1.793-0.8073Yes
15CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]34381-2.017-0.8044Yes
16CDK2cyclin dependent kinase 2 [Source:HGNC Symbol;Acc:HGNC:1771]34829-2.298-0.7993Yes
17SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35054-2.393-0.7876Yes
18EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]35359-2.639-0.7761Yes
19TRIP13thyroid hormone receptor interactor 13 [Source:HGNC Symbol;Acc:HGNC:12307]35484-2.727-0.7592Yes
20RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35552-2.794-0.7401Yes
21NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]35559-2.806-0.7194Yes
22STMN1stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]35595-2.845-0.6991Yes
23PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35620-2.871-0.6784Yes
24MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]35624-2.879-0.6570Yes
25TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35635-2.889-0.6358Yes
26UBE2Tubiquitin conjugating enzyme E2 T [Source:HGNC Symbol;Acc:HGNC:25009]35644-2.897-0.6144Yes
27LIG1DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]35783-2.979-0.5959Yes
28LBRlamin B receptor [Source:HGNC Symbol;Acc:HGNC:6518]35799-2.990-0.5741Yes
29CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]35809-2.998-0.5520Yes
30RPA1replication protein A1 [Source:HGNC Symbol;Acc:HGNC:10289]35922-3.092-0.5320Yes
31ASF1Banti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]35936-3.111-0.5091Yes
32DNA2DNA replication helicase/nuclease 2 [Source:HGNC Symbol;Acc:HGNC:2939]35937-3.113-0.4859Yes
33CCNE1cyclin E1 [Source:HGNC Symbol;Acc:HGNC:1589]36045-3.244-0.4647Yes
34CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36104-3.290-0.4417Yes
35AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36135-3.335-0.4177Yes
36CDCA7cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]36147-3.344-0.3931Yes
37PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36268-3.475-0.3704Yes
38HMGB3high mobility group box 3 [Source:HGNC Symbol;Acc:HGNC:5004]36321-3.512-0.3457Yes
39BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36332-3.523-0.3197Yes
40ANLNanillin actin binding protein [Source:HGNC Symbol;Acc:HGNC:14082]36337-3.529-0.2935Yes
41RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36345-3.537-0.2673Yes
42E2F8E2F transcription factor 8 [Source:HGNC Symbol;Acc:HGNC:24727]36385-3.578-0.2417Yes
43SGO1shugoshin 1 [Source:HGNC Symbol;Acc:HGNC:25088]36429-3.624-0.2159Yes
44MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36500-3.700-0.1902Yes
45CDKN2Ccyclin dependent kinase inhibitor 2C [Source:HGNC Symbol;Acc:HGNC:1789]36527-3.755-0.1629Yes
46CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36580-3.830-0.1358Yes
47RB1RB transcriptional corepressor 1 [Source:HGNC Symbol;Acc:HGNC:9884]36596-3.855-0.1075Yes
48NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36602-3.862-0.0788Yes
49KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]36610-3.875-0.0502Yes
50DUTdeoxyuridine triphosphatase [Source:HGNC Symbol;Acc:HGNC:3078]36711-3.993-0.0231Yes
51TK1thymidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11830]36948-4.4720.0038Yes
Table: GSEA details [plain text format]



Fig 2: ISHIDA_E2F_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ISHIDA_E2F_TARGETS: Random ES distribution   
Gene set null distribution of ES for ISHIDA_E2F_TARGETS