Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetKONG_E2F3_TARGETS
Enrichment Score (ES)-0.7916578
Normalized Enrichment Score (NES)-1.6592311
Nominal p-value0.0
FDR q-value0.007362675
FWER p-Value0.069
Table: GSEA Results Summary



Fig 1: Enrichment plot: KONG_E2F3_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IGF2BP1insulin like growth factor 2 mRNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:28866]4823.2680.0025No
2H2AC4H2A clustered histone 4 [Source:HGNC Symbol;Acc:HGNC:4734]9992.337-0.0004No
3GAS5growth arrest specific 5 [Source:HGNC Symbol;Acc:HGNC:16355]10012.3350.0107No
4NR1D1nuclear receptor subfamily 1 group D member 1 [Source:HGNC Symbol;Acc:HGNC:7962]21131.355-0.0129No
5SRSF7serine and arginine rich splicing factor 7 [Source:HGNC Symbol;Acc:HGNC:10789]28290.977-0.0276No
6E2F3E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]28970.945-0.0250No
7MED1mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]41700.480-0.0571No
8HJURPHolliday junction recognition protein [Source:HGNC Symbol;Acc:HGNC:25444]56090.153-0.0952No
9H4C15H4 clustered histone 15 [Source:HGNC Symbol;Acc:HGNC:29607]125410.000-0.2826No
10CDCA5cell division cycle associated 5 [Source:HGNC Symbol;Acc:HGNC:14626]166470.000-0.3935No
11MYBMYB proto-oncogene, transcription factor [Source:HGNC Symbol;Acc:HGNC:7545]191830.000-0.4621No
12TAL2TAL bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11557]192320.000-0.4634No
13GP1BAglycoprotein Ib platelet subunit alpha [Source:HGNC Symbol;Acc:HGNC:4439]203050.000-0.4923No
14PRLprolactin [Source:HGNC Symbol;Acc:HGNC:9445]247830.000-0.6134No
15PSORS1C2psoriasis susceptibility 1 candidate 2 [Source:HGNC Symbol;Acc:HGNC:17199]254630.000-0.6317No
16F13A1coagulation factor XIII A chain [Source:HGNC Symbol;Acc:HGNC:3531]277280.000-0.6929No
17NUP50nucleoporin 50 [Source:HGNC Symbol;Acc:HGNC:8065]28996-0.232-0.7261No
18RPL12ribosomal protein L12 [Source:HGNC Symbol;Acc:HGNC:10302]29492-0.361-0.7377No
19TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]30117-0.515-0.7522No
20MAPK8mitogen-activated protein kinase 8 [Source:HGNC Symbol;Acc:HGNC:6881]30160-0.529-0.7508No
21FBXO45F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]30502-0.607-0.7571No
22CDC7cell division cycle 7 [Source:HGNC Symbol;Acc:HGNC:1745]30627-0.640-0.7574No
23DCKdeoxycytidine kinase [Source:HGNC Symbol;Acc:HGNC:2704]30754-0.673-0.7576No
24CBX2chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]31584-0.921-0.7757No
25HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]31758-0.979-0.7757No
26TAF1DTATA-box binding protein associated factor, RNA polymerase I subunit D [Source:HGNC Symbol;Acc:HGNC:28759]32205-1.130-0.7824No
27SKP2S-phase kinase associated protein 2 [Source:HGNC Symbol;Acc:HGNC:10901]32548-1.271-0.7856Yes
28FAM111Afamily with sequence similarity 111 member A [Source:HGNC Symbol;Acc:HGNC:24725]32626-1.298-0.7816Yes
29FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]32691-1.323-0.7770Yes
30RPRD1Bregulation of nuclear pre-mRNA domain containing 1B [Source:HGNC Symbol;Acc:HGNC:16209]32803-1.370-0.7735Yes
31RAD51RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:9817]32989-1.461-0.7716Yes
32LMNB1lamin B1 [Source:HGNC Symbol;Acc:HGNC:6637]33093-1.504-0.7672Yes
33RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]33128-1.519-0.7609Yes
34HLXH2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]33129-1.520-0.7537Yes
35MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]33403-1.555-0.7537Yes
36RPL3ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]33581-1.638-0.7508Yes
37RBBP8RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]33676-1.679-0.7453Yes
38TACC3transforming acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:HGNC:11524]33842-1.752-0.7415Yes
39INCENPinner centromere protein [Source:HGNC Symbol;Acc:HGNC:6058]33944-1.801-0.7357Yes
40RBL1RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]33963-1.808-0.7276Yes
41PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34181-1.920-0.7243Yes
42CENPHcentromere protein H [Source:HGNC Symbol;Acc:HGNC:17268]34317-2.002-0.7185Yes
43CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]34381-2.017-0.7106Yes
44USP1ubiquitin specific peptidase 1 [Source:HGNC Symbol;Acc:HGNC:12607]34506-2.095-0.7040Yes
45CENPQcentromere protein Q [Source:HGNC Symbol;Acc:HGNC:21347]34544-2.117-0.6950Yes
46ERCC6LERCC excision repair 6 like, spindle assembly checkpoint helicase [Source:HGNC Symbol;Acc:HGNC:20794]34590-2.144-0.6861Yes
47BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]34617-2.156-0.6765Yes
48NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]34638-2.171-0.6668Yes
49TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]34811-2.286-0.6606Yes
50UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]34921-2.364-0.6523Yes
51SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35054-2.393-0.6445Yes
52KIF20Akinesin family member 20A [Source:HGNC Symbol;Acc:HGNC:9787]35171-2.487-0.6359Yes
53RAD54LRAD54 like [Source:HGNC Symbol;Acc:HGNC:9826]35189-2.503-0.6245Yes
54AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]35217-2.531-0.6132Yes
55NCAPG2non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]35282-2.576-0.6027Yes
56SPDL1spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]35339-2.617-0.5918Yes
57EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]35359-2.639-0.5798Yes
58CENPKcentromere protein K [Source:HGNC Symbol;Acc:HGNC:29479]35457-2.706-0.5696Yes
59CDC6cell division cycle 6 [Source:HGNC Symbol;Acc:HGNC:1744]35504-2.750-0.5578Yes
60SYCE2synaptonemal complex central element protein 2 [Source:HGNC Symbol;Acc:HGNC:27411]35509-2.752-0.5448Yes
61NCAPD2non-SMC condensin I complex subunit D2 [Source:HGNC Symbol;Acc:HGNC:24305]35517-2.758-0.5319Yes
62NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]35559-2.806-0.5197Yes
63IQGAP3IQ motif containing GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:20669]35611-2.858-0.5076Yes
64PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35620-2.871-0.4942Yes
65TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35635-2.889-0.4808Yes
66UBE2Tubiquitin conjugating enzyme E2 T [Source:HGNC Symbol;Acc:HGNC:25009]35644-2.897-0.4673Yes
67DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35697-2.900-0.4550Yes
68FIGNL1fidgetin like 1 [Source:HGNC Symbol;Acc:HGNC:13286]35699-2.901-0.4412Yes
69SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]35789-2.981-0.4295Yes
70CDCA3cell division cycle associated 3 [Source:HGNC Symbol;Acc:HGNC:14624]35805-2.996-0.4157Yes
71CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]35809-2.998-0.4015Yes
72ASF1Banti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]35936-3.111-0.3902Yes
73DNA2DNA replication helicase/nuclease 2 [Source:HGNC Symbol;Acc:HGNC:2939]35937-3.113-0.3754Yes
74PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]35969-3.152-0.3613Yes
75SPC25SPC25 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24031]36011-3.197-0.3473Yes
76MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36017-3.205-0.3322Yes
77NCAPGnon-SMC condensin I complex subunit G [Source:HGNC Symbol;Acc:HGNC:24304]36020-3.209-0.3170Yes
78CCNE1cyclin E1 [Source:HGNC Symbol;Acc:HGNC:1589]36045-3.244-0.3023Yes
79RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36132-3.332-0.2888Yes
80CCNFcyclin F [Source:HGNC Symbol;Acc:HGNC:1591]36199-3.393-0.2745Yes
81PBKPDZ binding kinase [Source:HGNC Symbol;Acc:HGNC:18282]36205-3.402-0.2585Yes
82KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36211-3.412-0.2425Yes
83CHAF1Bchromatin assembly factor 1 subunit B [Source:HGNC Symbol;Acc:HGNC:1911]36221-3.418-0.2265Yes
84NUF2NUF2 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:14621]36263-3.468-0.2111Yes
85PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36268-3.475-0.1948Yes
86HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]36309-3.500-0.1792Yes
87PSIP1PC4 and SFRS1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9527]36312-3.503-0.1627Yes
88BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36332-3.523-0.1465Yes
89BRCA1BRCA1 DNA repair associated [Source:HGNC Symbol;Acc:HGNC:1100]36365-3.555-0.1305Yes
90MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36500-3.700-0.1166Yes
91DEPDC1DEP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22949]36512-3.711-0.0993Yes
92H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36567-3.812-0.0826Yes
93CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36580-3.830-0.0648Yes
94NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36602-3.862-0.0470Yes
95KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]36610-3.875-0.0288Yes
96CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36884-4.334-0.0157Yes
97TK1thymidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11830]36948-4.4720.0038Yes
Table: GSEA details [plain text format]



Fig 2: KONG_E2F3_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KONG_E2F3_TARGETS: Random ES distribution   
Gene set null distribution of ES for KONG_E2F3_TARGETS