Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #WT_LPS_versus_WT_NA.Nof1.cls #WT_LPS_versus_WT_NA_repos |
| Phenotype | Nof1.cls#WT_LPS_versus_WT_NA_repos |
| Upregulated in class | WT_LPS |
| GeneSet | LIANG_SILENCED_BY_METHYLATION_2 |
| Enrichment Score (ES) | 0.84976524 |
| Normalized Enrichment Score (NES) | 2.0025253 |
| Nominal p-value | 0.0 |
| FDR q-value | 3.5384495E-4 |
| FWER p-Value | 0.003 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | CCL5 | C-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10632] | 5 | 4.992 | 0.0534 | Yes |
| 2 | SERPINB2 | serpin family B member 2 [Source:HGNC Symbol;Acc:HGNC:8584] | 23 | 4.965 | 0.1062 | Yes |
| 3 | PTGS2 | prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605] | 32 | 4.953 | 0.1591 | Yes |
| 4 | SAA1 | serum amyloid A1 [Source:HGNC Symbol;Acc:HGNC:10513] | 33 | 4.951 | 0.2122 | Yes |
| 5 | MX2 | MX dynamin like GTPase 2 [Source:HGNC Symbol;Acc:HGNC:7533] | 36 | 4.945 | 0.2652 | Yes |
| 6 | IFIT1 | interferon induced protein with tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:5407] | 51 | 4.875 | 0.3171 | Yes |
| 7 | MX1 | MX dynamin like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:7532] | 54 | 4.870 | 0.3693 | Yes |
| 8 | IFIT2 | interferon induced protein with tetratricopeptide repeats 2 [Source:HGNC Symbol;Acc:HGNC:5409] | 63 | 4.848 | 0.4210 | Yes |
| 9 | IRF7 | interferon regulatory factor 7 [Source:HGNC Symbol;Acc:HGNC:6122] | 96 | 4.689 | 0.4705 | Yes |
| 10 | IFI44 | interferon induced protein 44 [Source:HGNC Symbol;Acc:HGNC:16938] | 207 | 4.163 | 0.5121 | Yes |
| 11 | IL13RA2 | interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975] | 241 | 4.028 | 0.5545 | Yes |
| 12 | STAT1 | signal transducer and activator of transcription 1 [Source:HGNC Symbol;Acc:HGNC:11362] | 252 | 3.978 | 0.5968 | Yes |
| 13 | TNFAIP3 | TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896] | 271 | 3.923 | 0.6384 | Yes |
| 14 | OAS1 | 2'-5'-oligoadenylate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:8086] | 301 | 3.811 | 0.6785 | Yes |
| 15 | OAS2 | 2'-5'-oligoadenylate synthetase 2 [Source:HGNC Symbol;Acc:HGNC:8087] | 310 | 3.764 | 0.7187 | Yes |
| 16 | IL6 | interleukin 6 [Source:HGNC Symbol;Acc:HGNC:6018] | 351 | 3.623 | 0.7564 | Yes |
| 17 | SOD2 | superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180] | 460 | 3.318 | 0.7891 | Yes |
| 18 | INHBA | inhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066] | 603 | 2.990 | 0.8174 | Yes |
| 19 | IFIT3 | interferon induced protein with tetratricopeptide repeats 3 [Source:HGNC Symbol;Acc:HGNC:5411] | 1008 | 2.327 | 0.8314 | Yes |
| 20 | C3 | complement C3 [Source:HGNC Symbol;Acc:HGNC:1318] | 1170 | 2.118 | 0.8498 | Yes |
| 21 | UCHL1 | ubiquitin C-terminal hydrolase L1 [Source:HGNC Symbol;Acc:HGNC:12513] | 2368 | 1.196 | 0.8303 | No |
| 22 | HBEGF | heparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059] | 3653 | 0.651 | 0.8026 | No |
| 23 | STX3 | syntaxin 3 [Source:HGNC Symbol;Acc:HGNC:11438] | 5024 | 0.222 | 0.7680 | No |
| 24 | SP100 | SP100 nuclear antigen [Source:HGNC Symbol;Acc:HGNC:11206] | 5031 | 0.219 | 0.7701 | No |
| 25 | CCL20 | C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619] | 6220 | 0.000 | 0.7381 | No |
| 26 | AREG | amphiregulin [Source:HGNC Symbol;Acc:HGNC:651] | 7129 | 0.000 | 0.7136 | No |
| 27 | SLPI | secretory leukocyte peptidase inhibitor [Source:HGNC Symbol;Acc:HGNC:11092] | 9197 | 0.000 | 0.6577 | No |
| 28 | LCN2 | lipocalin 2 [Source:HGNC Symbol;Acc:HGNC:6526] | 10841 | 0.000 | 0.6134 | No |
| 29 | TNFSF10 | TNF superfamily member 10 [Source:HGNC Symbol;Acc:HGNC:11925] | 12319 | 0.000 | 0.5735 | No |
| 30 | THBD | thrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784] | 12572 | 0.000 | 0.5667 | No |
| 31 | BIK | BCL2 interacting killer [Source:HGNC Symbol;Acc:HGNC:1051] | 15451 | 0.000 | 0.4890 | No |
| 32 | H19 | H19 imprinted maternally expressed transcript [Source:HGNC Symbol;Acc:HGNC:4713] | 17062 | 0.000 | 0.4455 | No |
| 33 | ICAM1 | intercellular adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5344] | 18237 | 0.000 | 0.4138 | No |
| 34 | GAGE1 | G antigen 1 [Source:HGNC Symbol;Acc:HGNC:4098] | 18790 | 0.000 | 0.3989 | No |
| 35 | MMP1 | matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155] | 19113 | 0.000 | 0.3902 | No |
| 36 | CXCL6 | C-X-C motif chemokine ligand 6 [Source:HGNC Symbol;Acc:HGNC:10643] | 19463 | 0.000 | 0.3808 | No |
| 37 | CXCL2 | C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603] | 19480 | 0.000 | 0.3803 | No |
| 38 | CXCL5 | C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642] | 19482 | 0.000 | 0.3803 | No |
| 39 | DHRS2 | dehydrogenase/reductase 2 [Source:HGNC Symbol;Acc:HGNC:18349] | 20011 | 0.000 | 0.3661 | No |
| 40 | IFI44L | interferon induced protein 44 like [Source:HGNC Symbol;Acc:HGNC:17817] | 20701 | 0.000 | 0.3474 | No |
| 41 | CSF2 | colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434] | 21576 | 0.000 | 0.3238 | No |
| 42 | NT5E | 5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021] | 21791 | 0.000 | 0.3181 | No |
| 43 | MAGEA12 | MAGE family member A12 [Source:HGNC Symbol;Acc:HGNC:6799] | 23733 | 0.000 | 0.2657 | No |
| 44 | MAGEA2 | MAGE family member A2 [Source:HGNC Symbol;Acc:HGNC:6800] | 23901 | 0.000 | 0.2611 | No |
| 45 | MAGEA3 | MAGE family member A3 [Source:HGNC Symbol;Acc:HGNC:6801] | 23906 | 0.000 | 0.2610 | No |
| 46 | MAGEA4 | MAGE family member A4 [Source:HGNC Symbol;Acc:HGNC:6802] | 23908 | 0.000 | 0.2610 | No |
| 47 | SSX2 | SSX family member 2 [Source:HGNC Symbol;Acc:HGNC:11336] | 24437 | 0.000 | 0.2468 | No |
| 48 | XAF1 | XIAP associated factor 1 [Source:HGNC Symbol;Acc:HGNC:30932] | 24519 | 0.000 | 0.2446 | No |
| 49 | PI3 | peptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:8947] | 24678 | 0.000 | 0.2403 | No |
| 50 | IFI6 | interferon alpha inducible protein 6 [Source:HGNC Symbol;Acc:HGNC:4054] | 25400 | 0.000 | 0.2208 | No |
| 51 | H2AC18 | H2A clustered histone 18 [Source:HGNC Symbol;Acc:HGNC:4736] | 26559 | 0.000 | 0.1896 | No |
| 52 | KRT17 | keratin 17 [Source:HGNC Symbol;Acc:HGNC:6427] | 26848 | 0.000 | 0.1818 | No |
| 53 | CTAG1B | cancer/testis antigen 1B [Source:HGNC Symbol;Acc:HGNC:2491] | 27255 | 0.000 | 0.1708 | No |
| 54 | STC1 | stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373] | 29896 | -0.453 | 0.1044 | No |
| 55 | S100A4 | S100 calcium binding protein A4 [Source:HGNC Symbol;Acc:HGNC:10494] | 31473 | -0.884 | 0.0713 | No |
| 56 | H2AC6 | H2A clustered histone 6 [Source:HGNC Symbol;Acc:HGNC:4733] | 33226 | -1.529 | 0.0404 | No |
| 57 | C1S | complement C1s [Source:HGNC Symbol;Acc:HGNC:1247] | 33542 | -1.617 | 0.0493 | No |
| 58 | H2BC6 | H2B clustered histone 6 [Source:HGNC Symbol;Acc:HGNC:4753] | 36886 | -4.338 | 0.0055 | No |
