Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetMORI_IMMATURE_B_LYMPHOCYTE_DN
Enrichment Score (ES)-0.7822783
Normalized Enrichment Score (NES)-1.6363131
Nominal p-value0.0
FDR q-value0.011162622
FWER p-Value0.174
Table: GSEA Results Summary



Fig 1: Enrichment plot: MORI_IMMATURE_B_LYMPHOCYTE_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1H2AC4H2A clustered histone 4 [Source:HGNC Symbol;Acc:HGNC:4734]9992.337-0.0145No
2TXNthioredoxin [Source:HGNC Symbol;Acc:HGNC:12435]17561.602-0.0263No
3CDKN1Acyclin dependent kinase inhibitor 1A [Source:HGNC Symbol;Acc:HGNC:1784]19701.456-0.0243No
4MTHFD2methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase [Source:HGNC Symbol;Acc:HGNC:7434]26651.053-0.0374No
5HNRNPABheterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:HGNC:5034]33370.767-0.0514No
6HMGN2high mobility group nucleosomal binding domain 2 [Source:HGNC Symbol;Acc:HGNC:4986]36710.644-0.0569No
7PREPprolyl endopeptidase [Source:HGNC Symbol;Acc:HGNC:9358]45660.348-0.0792No
8HJURPHolliday junction recognition protein [Source:HGNC Symbol;Acc:HGNC:25444]56090.153-0.1066No
9SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]58780.081-0.1134No
10RAG1recombination activating 1 [Source:HGNC Symbol;Acc:HGNC:9831]124080.000-0.2898No
11CDCA5cell division cycle associated 5 [Source:HGNC Symbol;Acc:HGNC:14626]166470.000-0.4044No
12IGLL1immunoglobulin lambda like polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:5870]184270.000-0.4525No
13ENPEPglutamyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:3355]243480.000-0.6125No
14RAMP1receptor activity modifying protein 1 [Source:HGNC Symbol;Acc:HGNC:9843]250240.000-0.6307No
15SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]28363-0.054-0.7206No
16ACTN4actinin alpha 4 [Source:HGNC Symbol;Acc:HGNC:166]29596-0.387-0.7519No
17PRDX4peroxiredoxin 4 [Source:HGNC Symbol;Acc:HGNC:17169]30103-0.511-0.7628No
18ANP32Eacidic nuclear phosphoprotein 32 family member E [Source:HGNC Symbol;Acc:HGNC:16673]30578-0.627-0.7722No
19CBX1chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551]30747-0.672-0.7732No
20DCKdeoxycytidine kinase [Source:HGNC Symbol;Acc:HGNC:2704]30754-0.673-0.7697No
21PCK2phosphoenolpyruvate carboxykinase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:8725]31084-0.779-0.7745No
22MCM10minichromosome maintenance 10 replication initiation factor [Source:HGNC Symbol;Acc:HGNC:18043]31243-0.829-0.7743No
23PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]31440-0.872-0.7749No
24HAUS3HAUS augmin like complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:28719]31714-0.965-0.7771Yes
25HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]31758-0.979-0.7730Yes
26HNRNPA3heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]31787-0.987-0.7685Yes
27SLBPstem-loop binding protein [Source:HGNC Symbol;Acc:HGNC:10904]31894-1.023-0.7659Yes
28TUBB4Btubulin beta 4B class IVb [Source:HGNC Symbol;Acc:HGNC:20771]31976-1.055-0.7624Yes
29CDC45cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]32023-1.073-0.7579Yes
30CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]32153-1.113-0.7554Yes
31UCK2uridine-cytidine kinase 2 [Source:HGNC Symbol;Acc:HGNC:12562]32159-1.115-0.7496Yes
32CENPAcentromere protein A [Source:HGNC Symbol;Acc:HGNC:1851]32379-1.207-0.7490Yes
33KPNA2karyopherin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6395]32455-1.235-0.7444Yes
34RAD51RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:9817]32989-1.461-0.7510Yes
35LMNB1lamin B1 [Source:HGNC Symbol;Acc:HGNC:6637]33093-1.504-0.7457Yes
36SLC16A1solute carrier family 16 member 1 [Source:HGNC Symbol;Acc:HGNC:10922]33095-1.505-0.7377Yes
37MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]33403-1.555-0.7376Yes
38RBBP4RB binding protein 4, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:9887]33409-1.558-0.7294Yes
39LGALS1galectin 1 [Source:HGNC Symbol;Acc:HGNC:6561]33426-1.566-0.7214Yes
40HMGB1high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]33729-1.701-0.7205Yes
41TUBA1Atubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]33775-1.722-0.7125Yes
42CKAP5cytoskeleton associated protein 5 [Source:HGNC Symbol;Acc:HGNC:28959]33962-1.808-0.7078Yes
43CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]33975-1.818-0.6984Yes
44TUBA1Btubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]34328-2.007-0.6971Yes
45CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]34381-2.017-0.6877Yes
46MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]34433-2.054-0.6781Yes
47CENPLcentromere protein L [Source:HGNC Symbol;Acc:HGNC:17879]34451-2.062-0.6675Yes
48MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]34817-2.289-0.6651Yes
49UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]34921-2.364-0.6552Yes
50TUBBtubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]34939-2.379-0.6429Yes
51SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35054-2.393-0.6331Yes
52CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]35122-2.440-0.6218Yes
53CHEK1checkpoint kinase 1 [Source:HGNC Symbol;Acc:HGNC:1925]35152-2.473-0.6094Yes
54XRCC6X-ray repair cross complementing 6 [Source:HGNC Symbol;Acc:HGNC:4055]35153-2.475-0.5961Yes
55RAD54LRAD54 like [Source:HGNC Symbol;Acc:HGNC:9826]35189-2.503-0.5836Yes
56EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]35359-2.639-0.5740Yes
57SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]35524-2.765-0.5636Yes
58KIFC1kinesin family member C1 [Source:HGNC Symbol;Acc:HGNC:6389]35525-2.767-0.5488Yes
59RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35552-2.794-0.5345Yes
60NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]35559-2.806-0.5196Yes
61STMN1stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]35595-2.845-0.5053Yes
62IQGAP3IQ motif containing GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:20669]35611-2.858-0.4904Yes
63PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35620-2.871-0.4752Yes
64MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]35624-2.879-0.4599Yes
65TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35635-2.889-0.4446Yes
66DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35697-2.900-0.4307Yes
67LIG1DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]35783-2.979-0.4171Yes
68CDCA3cell division cycle associated 3 [Source:HGNC Symbol;Acc:HGNC:14624]35805-2.996-0.4016Yes
69CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]35809-2.998-0.3856Yes
70TMPOthymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]35818-3.002-0.3697Yes
71GSNgelsolin [Source:HGNC Symbol;Acc:HGNC:4620]35909-3.083-0.3556Yes
72DTLdenticleless E3 ubiquitin protein ligase homolog [Source:HGNC Symbol;Acc:HGNC:30288]35985-3.169-0.3406Yes
73MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36017-3.205-0.3243Yes
74CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36104-3.290-0.3089Yes
75SLC29A1solute carrier family 29 member 1 (Augustine blood group) [Source:HGNC Symbol;Acc:HGNC:11003]36122-3.318-0.2916Yes
76CDCA7cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]36147-3.344-0.2743Yes
77DNMT1DNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:2976]36216-3.414-0.2579Yes
78PTGR1prostaglandin reductase 1 [Source:HGNC Symbol;Acc:HGNC:18429]36226-3.421-0.2398Yes
79PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36268-3.475-0.2222Yes
80HMGB3high mobility group box 3 [Source:HGNC Symbol;Acc:HGNC:5004]36321-3.512-0.2048Yes
81RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36345-3.537-0.1864Yes
82E2F8E2F transcription factor 8 [Source:HGNC Symbol;Acc:HGNC:24727]36385-3.578-0.1683Yes
83MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36500-3.700-0.1516Yes
84CDKN2Ccyclin dependent kinase inhibitor 2C [Source:HGNC Symbol;Acc:HGNC:1789]36527-3.755-0.1321Yes
85H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36567-3.812-0.1127Yes
86CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36580-3.830-0.0925Yes
87NEK2NIMA related kinase 2 [Source:HGNC Symbol;Acc:HGNC:7745]36597-3.856-0.0723Yes
88NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36602-3.862-0.0517Yes
89H2AZ2H2A.Z variant histone 2 [Source:HGNC Symbol;Acc:HGNC:20664]36717-4.001-0.0333Yes
90NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36726-4.014-0.0120Yes
91TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]36761-4.0650.0089Yes
Table: GSEA details [plain text format]



Fig 2: MORI_IMMATURE_B_LYMPHOCYTE_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: MORI_IMMATURE_B_LYMPHOCYTE_DN: Random ES distribution   
Gene set null distribution of ES for MORI_IMMATURE_B_LYMPHOCYTE_DN