Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetODONNELL_TFRC_TARGETS_DN
Enrichment Score (ES)-0.77137846
Normalized Enrichment Score (NES)-1.6488533
Nominal p-value0.0
FDR q-value0.009243901
FWER p-Value0.107
Table: GSEA Results Summary



Fig 1: Enrichment plot: ODONNELL_TFRC_TARGETS_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1FAPfibroblast activation protein alpha [Source:HGNC Symbol;Acc:HGNC:3590]3643.5640.0046No
2KBTBD8kelch repeat and BTB domain containing 8 [Source:HGNC Symbol;Acc:HGNC:30691]9572.421-0.0017No
3HSPH1heat shock protein family H (Hsp110) member 1 [Source:HGNC Symbol;Acc:HGNC:16969]11412.1380.0020No
4DCP2decapping mRNA 2 [Source:HGNC Symbol;Acc:HGNC:24452]13201.9290.0050No
5ASNSasparagine synthetase (glutamine-hydrolyzing) [Source:HGNC Symbol;Acc:HGNC:753]14061.8320.0101No
6TFRCtransferrin receptor [Source:HGNC Symbol;Acc:HGNC:11763]15991.7590.0121No
7TOX4TOX high mobility group box family member 4 [Source:HGNC Symbol;Acc:HGNC:20161]17711.5940.0139No
8FUSFUS RNA binding protein [Source:HGNC Symbol;Acc:HGNC:4010]21161.3500.0100No
9RAD54BRAD54 homolog B [Source:HGNC Symbol;Acc:HGNC:17228]26841.040-0.0011No
10MEX3Cmex-3 RNA binding family member C [Source:HGNC Symbol;Acc:HGNC:28040]28310.977-0.0011No
11BPTFbromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]29140.9370.0005No
12RANBP1RAN binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9847]30090.8920.0015No
13ZBTB6zinc finger and BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16764]38430.583-0.0186No
14TNRC6Atrinucleotide repeat containing adaptor 6A [Source:HGNC Symbol;Acc:HGNC:11969]39860.541-0.0203No
15SETMARSET domain and mariner transposase fusion gene [Source:HGNC Symbol;Acc:HGNC:10762]41650.485-0.0232No
16CCDC148coiled-coil domain containing 148 [Source:HGNC Symbol;Acc:HGNC:25191]42000.468-0.0222No
17ANKRD50ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]48710.268-0.0392No
18H3C7H3 clustered histone 7 [Source:HGNC Symbol;Acc:HGNC:4773]53950.153-0.0528No
19RAD1RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]58480.089-0.0646No
20LRRC58leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]60200.033-0.0691No
21LIN28Blin-28 homolog B [Source:HGNC Symbol;Acc:HGNC:32207]63930.000-0.0792No
22USP29ubiquitin specific peptidase 29 [Source:HGNC Symbol;Acc:HGNC:18563]64340.000-0.0803No
23FGF22fibroblast growth factor 22 [Source:HGNC Symbol;Acc:HGNC:3679]67310.000-0.0883No
24SMYD3-IT1SMYD3 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41406]74210.000-0.1069No
25LINC01010long intergenic non-protein coding RNA 1010 [Source:HGNC Symbol;Acc:HGNC:48978]79320.000-0.1207No
26SIX3SIX homeobox 3 [Source:HGNC Symbol;Acc:HGNC:10889]83110.000-0.1310No
27TBC1D8-AS1TBC1D8 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:52782]86350.000-0.1397No
28CASP14caspase 14 [Source:HGNC Symbol;Acc:HGNC:1502]90750.000-0.1516No
29KCNA1potassium voltage-gated channel subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:6218]95750.000-0.1651No
30FBXL21PF-box and leucine rich repeat protein 21, pseudogene [Source:HGNC Symbol;Acc:HGNC:13600]98780.000-0.1733No
31RTP1receptor transporter protein 1 [Source:HGNC Symbol;Acc:HGNC:28580]104150.000-0.1878No
32FAM181Bfamily with sequence similarity 181 member B [Source:HGNC Symbol;Acc:HGNC:28512]106540.000-0.1942No
33PRKCQ-AS1PRKCQ antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44689]108620.000-0.1998No
34H4C12H4 clustered histone 12 [Source:HGNC Symbol;Acc:HGNC:4784]125430.000-0.2453No
35TP63tumor protein p63 [Source:HGNC Symbol;Acc:HGNC:15979]153040.000-0.3200No
36B4GALNT3beta-1,4-N-acetyl-galactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:24137]153180.000-0.3203No
37TCEAL3transcription elongation factor A like 3 [Source:HGNC Symbol;Acc:HGNC:28247]158680.000-0.3352No
38FETUBfetuin B [Source:HGNC Symbol;Acc:HGNC:3658]169080.000-0.3633No
39SLC12A1solute carrier family 12 member 1 [Source:HGNC Symbol;Acc:HGNC:10910]175320.000-0.3801No
40ITPRID1ITPR interacting domain containing 1 [Source:HGNC Symbol;Acc:HGNC:27363]176750.000-0.3840No
41NPNTnephronectin [Source:HGNC Symbol;Acc:HGNC:27405]207110.000-0.4661No
42CPNE6copine 6 [Source:HGNC Symbol;Acc:HGNC:2319]212830.000-0.4816No
43NRTNneurturin [Source:HGNC Symbol;Acc:HGNC:8007]213720.000-0.4840No
44XAGE3X antigen family member 3 [Source:HGNC Symbol;Acc:HGNC:14618]218630.000-0.4972No
45CYTORcytoskeleton regulator RNA [Source:HGNC Symbol;Acc:HGNC:28717]223710.000-0.5109No
46TTC9Btetratricopeptide repeat domain 9B [Source:HGNC Symbol;Acc:HGNC:26395]232700.000-0.5352No
47MIR3939microRNA 3939 [Source:HGNC Symbol;Acc:HGNC:38931]256260.000-0.5990No
48KRT35keratin 35 [Source:HGNC Symbol;Acc:HGNC:6453]268020.000-0.6308No
49SNORD17small nucleolar RNA, C/D box 17 [Source:HGNC Symbol;Acc:HGNC:32713]271850.000-0.6411No
50FAM72Cfamily with sequence similarity 72 member C [Source:HGNC Symbol;Acc:HGNC:30602]272470.000-0.6428No
51SNORD93small nucleolar RNA, C/D box 93 [Source:HGNC Symbol;Acc:HGNC:32755]272770.000-0.6435No
52TSBP1testis expressed basic protein 1 [Source:HGNC Symbol;Acc:HGNC:13922]275220.000-0.6501No
53DSCAMDS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]281260.000-0.6665No
54FKBP5FKBP prolyl isomerase 5 [Source:HGNC Symbol;Acc:HGNC:3721]28210-0.012-0.6687No
55GNAQG protein subunit alpha q [Source:HGNC Symbol;Acc:HGNC:4390]28469-0.086-0.6753No
56CFL2cofilin 2 [Source:HGNC Symbol;Acc:HGNC:1875]28604-0.128-0.6784No
57NUP50nucleoporin 50 [Source:HGNC Symbol;Acc:HGNC:8065]28996-0.232-0.6881No
58PCBP1-AS1PCBP1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:42948]29175-0.280-0.6917No
59SAMM50SAMM50 sorting and assembly machinery component [Source:HGNC Symbol;Acc:HGNC:24276]29532-0.370-0.6999No
60VSNL1visinin like 1 [Source:HGNC Symbol;Acc:HGNC:12722]29747-0.417-0.7040No
61G3BP1G3BP stress granule assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:30292]30018-0.487-0.7093No
62MON2MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:HGNC Symbol;Acc:HGNC:29177]30671-0.651-0.7243No
63CD151CD151 molecule (Raph blood group) [Source:HGNC Symbol;Acc:HGNC:1630]31191-0.813-0.7351No
64CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]32153-1.113-0.7566No
65CENPAcentromere protein A [Source:HGNC Symbol;Acc:HGNC:1851]32379-1.207-0.7578No
66TUBD1tubulin delta 1 [Source:HGNC Symbol;Acc:HGNC:16811]32882-1.418-0.7656Yes
67SURF1SURF1 cytochrome c oxidase assembly factor [Source:HGNC Symbol;Acc:HGNC:11474]32988-1.460-0.7626Yes
68ACACAacetyl-CoA carboxylase alpha [Source:HGNC Symbol;Acc:HGNC:84]33063-1.493-0.7585Yes
69DLEU2deleted in lymphocytic leukemia 2 [Source:HGNC Symbol;Acc:HGNC:13748]33319-1.529-0.7593Yes
70RIF1replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]33362-1.534-0.7542Yes
71TAF5TATA-box binding protein associated factor 5 [Source:HGNC Symbol;Acc:HGNC:11539]33441-1.573-0.7499Yes
72DIAPH3diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]33524-1.608-0.7456Yes
73GALTgalactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]33793-1.728-0.7459Yes
74TACC3transforming acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:HGNC:11524]33842-1.752-0.7401Yes
75DBF4DBF4 zinc finger [Source:HGNC Symbol;Acc:HGNC:17364]33929-1.793-0.7352Yes
76CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]33975-1.818-0.7291Yes
77ARHGAP11ARho GTPase activating protein 11A [Source:HGNC Symbol;Acc:HGNC:15783]34116-1.885-0.7252Yes
78PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]34248-1.957-0.7208Yes
79CHAF1Achromatin assembly factor 1 subunit A [Source:HGNC Symbol;Acc:HGNC:1910]34259-1.967-0.7132Yes
80NSD2nuclear receptor binding SET domain protein 2 [Source:HGNC Symbol;Acc:HGNC:12766]34280-1.977-0.7057Yes
81TADA2Atranscriptional adaptor 2A [Source:HGNC Symbol;Acc:HGNC:11531]34380-2.017-0.7002Yes
82CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]34381-2.017-0.6921Yes
83ACVR2Bactivin A receptor type 2B [Source:HGNC Symbol;Acc:HGNC:174]34484-2.081-0.6864Yes
84ERCC6LERCC excision repair 6 like, spindle assembly checkpoint helicase [Source:HGNC Symbol;Acc:HGNC:20794]34590-2.144-0.6806Yes
85BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]34617-2.156-0.6725Yes
86POLE2DNA polymerase epsilon 2, accessory subunit [Source:HGNC Symbol;Acc:HGNC:9178]34863-2.322-0.6698Yes
87GINS3GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]34907-2.355-0.6614Yes
88GTSE1G2 and S-phase expressed 1 [Source:HGNC Symbol;Acc:HGNC:13698]34936-2.377-0.6526Yes
89MND1meiotic nuclear divisions 1 [Source:HGNC Symbol;Acc:HGNC:24839]35024-2.383-0.6453Yes
90FANCD2FA complementation group D2 [Source:HGNC Symbol;Acc:HGNC:3585]35099-2.419-0.6375Yes
91HELLShelicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]35106-2.423-0.6279Yes
92CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]35122-2.440-0.6184Yes
93KIF20Akinesin family member 20A [Source:HGNC Symbol;Acc:HGNC:9787]35171-2.487-0.6096Yes
94AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]35217-2.531-0.6006Yes
95ZFAND4zinc finger AN1-type containing 4 [Source:HGNC Symbol;Acc:HGNC:23504]35236-2.540-0.5908Yes
96CDC6cell division cycle 6 [Source:HGNC Symbol;Acc:HGNC:1744]35504-2.750-0.5869Yes
97NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]35559-2.806-0.5770Yes
98TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35635-2.889-0.5674Yes
99ECT2epithelial cell transforming 2 [Source:HGNC Symbol;Acc:HGNC:3155]35645-2.898-0.5559Yes
100DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35697-2.900-0.5455Yes
101SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]35789-2.981-0.5359Yes
102CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]35809-2.998-0.5243Yes
103CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]35839-3.018-0.5129Yes
104FBXL20F-box and leucine rich repeat protein 20 [Source:HGNC Symbol;Acc:HGNC:24679]35902-3.072-0.5022Yes
105DNA2DNA replication helicase/nuclease 2 [Source:HGNC Symbol;Acc:HGNC:2939]35937-3.113-0.4905Yes
106PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]35969-3.152-0.4786Yes
107SPC25SPC25 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24031]36011-3.197-0.4667Yes
108BRCA2BRCA2 DNA repair associated [Source:HGNC Symbol;Acc:HGNC:1101]36012-3.197-0.4538Yes
109KIF14kinesin family member 14 [Source:HGNC Symbol;Acc:HGNC:19181]36034-3.229-0.4413Yes
110KIF4Akinesin family member 4A [Source:HGNC Symbol;Acc:HGNC:13339]36087-3.264-0.4295Yes
111SGO2shugoshin 2 [Source:HGNC Symbol;Acc:HGNC:30812]36103-3.290-0.4166Yes
112AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36135-3.335-0.4040Yes
113CEP55centrosomal protein 55 [Source:HGNC Symbol;Acc:HGNC:1161]36161-3.361-0.3910Yes
114KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36211-3.412-0.3786Yes
115BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]36250-3.453-0.3656Yes
116PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36268-3.475-0.3520Yes
117CKAP2Lcytoskeleton associated protein 2 like [Source:HGNC Symbol;Acc:HGNC:26877]36269-3.476-0.3380Yes
118HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]36309-3.500-0.3249Yes
119BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36332-3.523-0.3112Yes
120ANLNanillin actin binding protein [Source:HGNC Symbol;Acc:HGNC:14082]36337-3.529-0.2970Yes
121RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36345-3.537-0.2829Yes
122MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36500-3.700-0.2721Yes
123FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36503-3.702-0.2572Yes
124DEPDC1DEP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22949]36512-3.711-0.2424Yes
125CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36580-3.830-0.2287Yes
126MYBL2MYB proto-oncogene like 2 [Source:HGNC Symbol;Acc:HGNC:7548]36607-3.868-0.2138Yes
127C4orf46chromosome 4 open reading frame 46 [Source:HGNC Symbol;Acc:HGNC:27320]36712-3.994-0.2004Yes
128NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36726-4.014-0.1845Yes
129TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]36761-4.065-0.1690Yes
130NFIAnuclear factor I A [Source:HGNC Symbol;Acc:HGNC:7784]36814-4.146-0.1537Yes
131DEPDC1BDEP domain containing 1B [Source:HGNC Symbol;Acc:HGNC:24902]36832-4.186-0.1372Yes
132MAP4K2mitogen-activated protein kinase kinase kinase kinase 2 [Source:HGNC Symbol;Acc:HGNC:6864]36874-4.295-0.1209Yes
133SCDstearoyl-CoA desaturase [Source:HGNC Symbol;Acc:HGNC:10571]36875-4.299-0.1035Yes
134CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36884-4.334-0.0862Yes
135FBXO5F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]36932-4.442-0.0695Yes
136TMEM107transmembrane protein 107 [Source:HGNC Symbol;Acc:HGNC:28128]36939-4.453-0.0517Yes
137ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36959-4.497-0.0340Yes
138FAM83Dfamily with sequence similarity 83 member D [Source:HGNC Symbol;Acc:HGNC:16122]36962-4.518-0.0157Yes
139APBB1amyloid beta precursor protein binding family B member 1 [Source:HGNC Symbol;Acc:HGNC:581]37035-4.7420.0015Yes
Table: GSEA details [plain text format]



Fig 2: ODONNELL_TFRC_TARGETS_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ODONNELL_TFRC_TARGETS_DN: Random ES distribution   
Gene set null distribution of ES for ODONNELL_TFRC_TARGETS_DN