Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetIRF2_01
Enrichment Score (ES)0.49795446
Normalized Enrichment Score (NES)1.3087944
Nominal p-value0.0
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: IRF2_01   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]154.9810.0314Yes
2IL27interleukin 27 [Source:HGNC Symbol;Acc:HGNC:19157]174.9720.0631Yes
3PGM5phosphoglucomutase 5 [Source:HGNC Symbol;Acc:HGNC:8908]954.6920.0910Yes
4CXCL10C-X-C motif chemokine ligand 10 [Source:HGNC Symbol;Acc:HGNC:10637]1024.6370.1204Yes
5USP18ubiquitin specific peptidase 18 [Source:HGNC Symbol;Acc:HGNC:12616]1064.6070.1498Yes
6OSMoncostatin M [Source:HGNC Symbol;Acc:HGNC:8506]1624.3250.1759Yes
7DDX58DExD/H-box helicase 58 [Source:HGNC Symbol;Acc:HGNC:19102]2134.1270.2009Yes
8SYNE2spectrin repeat containing nuclear envelope protein 2 [Source:HGNC Symbol;Acc:HGNC:17084]2613.9550.2249Yes
9TAP1transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]3713.5460.2446Yes
10RELREL proto-oncogene, NF-kB subunit [Source:HGNC Symbol;Acc:HGNC:9954]3833.5150.2667Yes
11TAPBPTAP binding protein [Source:HGNC Symbol;Acc:HGNC:11566]4353.3960.2871Yes
12NT5C3A5'-nucleotidase, cytosolic IIIA [Source:HGNC Symbol;Acc:HGNC:17820]5073.1900.3055Yes
13ATF3activating transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:785]5333.1060.3247Yes
14DTX3Ldeltex E3 ubiquitin ligase 3L [Source:HGNC Symbol;Acc:HGNC:30323]5972.9970.3421Yes
15PARP9poly(ADP-ribose) polymerase family member 9 [Source:HGNC Symbol;Acc:HGNC:24118]7522.6960.3551Yes
16PSMB9proteasome 20S subunit beta 9 [Source:HGNC Symbol;Acc:HGNC:9546]8462.6010.3692Yes
17PRDX5peroxiredoxin 5 [Source:HGNC Symbol;Acc:HGNC:9355]8522.5880.3856Yes
18MED13mediator complex subunit 13 [Source:HGNC Symbol;Acc:HGNC:22474]8532.5870.4021Yes
19PSMB8proteasome 20S subunit beta 8 [Source:HGNC Symbol;Acc:HGNC:9545]9772.3890.4141Yes
20PSME1proteasome activator subunit 1 [Source:HGNC Symbol;Acc:HGNC:9568]10712.2340.4258Yes
21PIGVphosphatidylinositol glycan anchor biosynthesis class V [Source:HGNC Symbol;Acc:HGNC:26031]11922.0700.4358Yes
22LRATD2LRAT domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24166]12282.0260.4478Yes
23MAP3K11mitogen-activated protein kinase kinase kinase 11 [Source:HGNC Symbol;Acc:HGNC:6850]13451.9060.4568Yes
24TCIRG1T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 [Source:HGNC Symbol;Acc:HGNC:11647]14281.8080.4661Yes
25TMBIM4transmembrane BAX inhibitor motif containing 4 [Source:HGNC Symbol;Acc:HGNC:24257]15721.7870.4737Yes
26LSM6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:17017]20691.3860.4691Yes
27DNASE1L3deoxyribonuclease 1 like 3 [Source:HGNC Symbol;Acc:HGNC:2959]20761.3800.4778Yes
28IL11interleukin 11 [Source:HGNC Symbol;Acc:HGNC:5966]21191.3430.4852Yes
29PSMA3proteasome 20S subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:9532]22621.2590.4894Yes
30PCGF5polycomb group ring finger 5 [Source:HGNC Symbol;Acc:HGNC:28264]23561.2000.4946Yes
31RAPGEF6Rap guanine nucleotide exchange factor 6 [Source:HGNC Symbol;Acc:HGNC:20655]27910.9890.4891Yes
32E2F3E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]28970.9450.4923Yes
33B2Mbeta-2-microglobulin [Source:HGNC Symbol;Acc:HGNC:914]29110.9380.4980Yes
34SLC38A2solute carrier family 38 member 2 [Source:HGNC Symbol;Acc:HGNC:13448]36190.6630.4831No
35ROCK1Rho associated coiled-coil containing protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:10251]37490.6200.4835No
36PRKD3protein kinase D3 [Source:HGNC Symbol;Acc:HGNC:9408]40500.5190.4787No
37CDK6cyclin dependent kinase 6 [Source:HGNC Symbol;Acc:HGNC:1777]43200.4210.4741No
38CASZ1castor zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:26002]43850.3980.4750No
39UPF2UPF2 regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]50130.2250.4594No
40DLX1distal-less homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2914]53110.1530.4524No
41DUSP10dual specificity phosphatase 10 [Source:HGNC Symbol;Acc:HGNC:3065]56580.1510.4440No
42TMEM229Btransmembrane protein 229B [Source:HGNC Symbol;Acc:HGNC:20130]57840.1080.4413No
43PRKD2protein kinase D2 [Source:HGNC Symbol;Acc:HGNC:17293]58870.0770.4390No
44PRDM16PR/SET domain 16 [Source:HGNC Symbol;Acc:HGNC:14000]67840.0000.4148No
45ASPAaspartoacylase [Source:HGNC Symbol;Acc:HGNC:756]76360.0000.3918No
46BHLHE22basic helix-loop-helix family member e22 [Source:HGNC Symbol;Acc:HGNC:11963]80720.0000.3800No
47PROX1prospero homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9459]82660.0000.3748No
48HOXA6homeobox A6 [Source:HGNC Symbol;Acc:HGNC:5107]86760.0000.3637No
49KCNE4potassium voltage-gated channel subfamily E regulatory subunit 4 [Source:HGNC Symbol;Acc:HGNC:6244]96600.0000.3371No
50H4C7H4 clustered histone 7 [Source:HGNC Symbol;Acc:HGNC:4792]100820.0000.3257No
51RTL9retrotransposon Gag like 9 [Source:HGNC Symbol;Acc:HGNC:29245]103720.0000.3179No
52LDB2LIM domain binding 2 [Source:HGNC Symbol;Acc:HGNC:6533]109800.0000.3015No
53TMPRSS5transmembrane serine protease 5 [Source:HGNC Symbol;Acc:HGNC:14908]114790.0000.2880No
54BST2bone marrow stromal cell antigen 2 [Source:HGNC Symbol;Acc:HGNC:1119]123490.0000.2645No
55MSX1msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391]123860.0000.2635No
56UBDubiquitin D [Source:HGNC Symbol;Acc:HGNC:18795]126790.0000.2556No
57GLRA1glycine receptor alpha 1 [Source:HGNC Symbol;Acc:HGNC:4326]128190.0000.2519No
58TMEM108transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]133900.0000.2364No
59PDGFCplatelet derived growth factor C [Source:HGNC Symbol;Acc:HGNC:8801]134280.0000.2354No
60IL15RAinterleukin 15 receptor subunit alpha [Source:HGNC Symbol;Acc:HGNC:5978]140760.0000.2179No
61FLT3LGfms related receptor tyrosine kinase 3 ligand [Source:HGNC Symbol;Acc:HGNC:3766]140900.0000.2176No
62RFX4regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]143120.0000.2116No
63BLKBLK proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:1057]154690.0000.1803No
64TGFB3transforming growth factor beta 3 [Source:HGNC Symbol;Acc:HGNC:11769]165960.0000.1499No
65DLX4distal-less homeobox 4 [Source:HGNC Symbol;Acc:HGNC:2917]167110.0000.1468No
66IKZF2IKAROS family zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:13177]182340.0000.1056No
67ME3malic enzyme 3 [Source:HGNC Symbol;Acc:HGNC:6985]189240.0000.0870No
68NDNnecdin, MAGE family member [Source:HGNC Symbol;Acc:HGNC:7675]192780.0000.0774No
69BNC2basonuclin 2 [Source:HGNC Symbol;Acc:HGNC:30988]192850.0000.0773No
70OTX1orthodenticle homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8521]194450.0000.0730No
71TBX1T-box transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:11592]197420.0000.0649No
72NPR3natriuretic peptide receptor 3 [Source:HGNC Symbol;Acc:HGNC:7945]207200.0000.0385No
73EGFL6EGF like domain multiple 6 [Source:HGNC Symbol;Acc:HGNC:3235]210110.0000.0307No
74CCDC68coiled-coil domain containing 68 [Source:HGNC Symbol;Acc:HGNC:24350]216870.0000.0124No
75IFNB1interferon beta 1 [Source:HGNC Symbol;Acc:HGNC:5434]217930.0000.0096No
76IFNL2interferon lambda 2 [Source:HGNC Symbol;Acc:HGNC:18364]218940.0000.0069No
77IFNL3interferon lambda 3 [Source:HGNC Symbol;Acc:HGNC:18365]219050.0000.0066No
78KCNMB3potassium calcium-activated channel subfamily M regulatory beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:6287]219520.0000.0053No
79XAF1XIAP associated factor 1 [Source:HGNC Symbol;Acc:HGNC:30932]245190.000-0.0641No
80AGBL2ATP/GTP binding protein like 2 [Source:HGNC Symbol;Acc:HGNC:26296]252640.000-0.0842No
81BCL11ABAF chromatin remodeling complex subunit BCL11A [Source:HGNC Symbol;Acc:HGNC:13221]253720.000-0.0871No
82PIGRpolymeric immunoglobulin receptor [Source:HGNC Symbol;Acc:HGNC:8968]276840.000-0.1496No
83ASH1LASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088]28526-0.103-0.1717No
84CAPRIN1cell cycle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:6743]28578-0.120-0.1723No
85SREK1splicing regulatory glutamic acid and lysine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:17882]28659-0.141-0.1736No
86CUL2cullin 2 [Source:HGNC Symbol;Acc:HGNC:2552]28665-0.143-0.1728No
87EIF4A2eukaryotic translation initiation factor 4A2 [Source:HGNC Symbol;Acc:HGNC:3284]28669-0.144-0.1720No
88KARS1lysyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:6215]28745-0.166-0.1729No
89TRPM3transient receptor potential cation channel subfamily M member 3 [Source:HGNC Symbol;Acc:HGNC:17992]28752-0.168-0.1720No
90DLG1discs large MAGUK scaffold protein 1 [Source:HGNC Symbol;Acc:HGNC:2900]28915-0.214-0.1750No
91NABP2nucleic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28412]29052-0.246-0.1771No
92HPCAL1hippocalcin like 1 [Source:HGNC Symbol;Acc:HGNC:5145]29075-0.252-0.1761No
93YY1AP1YY1 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:30935]29187-0.283-0.1773No
94CSADcysteine sulfinic acid decarboxylase [Source:HGNC Symbol;Acc:HGNC:18966]29301-0.311-0.1784No
95HDAC4histone deacetylase 4 [Source:HGNC Symbol;Acc:HGNC:14063]29533-0.370-0.1823No
96MAPK6mitogen-activated protein kinase 6 [Source:HGNC Symbol;Acc:HGNC:6879]29816-0.434-0.1871No
97VGLL4vestigial like family member 4 [Source:HGNC Symbol;Acc:HGNC:28966]29982-0.473-0.1886No
98TRMT6tRNA methyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:20900]30248-0.554-0.1922No
99USP5ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]30403-0.581-0.1927No
100GPR52G protein-coupled receptor 52 [Source:HGNC Symbol;Acc:HGNC:4508]30994-0.741-0.2039No
101ABHD16Aabhydrolase domain containing 16A, phospholipase [Source:HGNC Symbol;Acc:HGNC:13921]31041-0.759-0.2003No
102BBXBBX high mobility group box domain containing [Source:HGNC Symbol;Acc:HGNC:14422]31111-0.787-0.1971No
103RELCHRAB11 binding and LisH domain, coiled-coil and HEAT repeat containing [Source:HGNC Symbol;Acc:HGNC:29289]31480-0.886-0.2014No
104TERF2IPTERF2 interacting protein [Source:HGNC Symbol;Acc:HGNC:19246]31600-0.925-0.1987No
105MITFmelanocyte inducing transcription factor [Source:HGNC Symbol;Acc:HGNC:7105]31915-1.030-0.2007No
106PLXNC1plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]32544-1.270-0.2095No
107CCDC6coiled-coil domain containing 6 [Source:HGNC Symbol;Acc:HGNC:18782]32843-1.394-0.2087No
108TRMT112tRNA methyltransferase subunit 11-2 [Source:HGNC Symbol;Acc:HGNC:26940]33117-1.512-0.2064No
109ESR1estrogen receptor 1 [Source:HGNC Symbol;Acc:HGNC:3467]33482-1.593-0.2061No
110RNF220ring finger protein 220 [Source:HGNC Symbol;Acc:HGNC:25552]33522-1.608-0.1969No
111USF1upstream transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:12593]33728-1.701-0.1916No
112DDX17DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]33828-1.742-0.1831No
113KDM3Alysine demethylase 3A [Source:HGNC Symbol;Acc:HGNC:20815]33998-1.828-0.1760No
114AMER1APC membrane recruitment protein 1 [Source:HGNC Symbol;Acc:HGNC:26837]34001-1.830-0.1644No
115DAP3death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]34107-1.879-0.1552No
116NR3C2nuclear receptor subfamily 3 group C member 2 [Source:HGNC Symbol;Acc:HGNC:7979]34476-2.077-0.1519No
117ARHGAP5Rho GTPase activating protein 5 [Source:HGNC Symbol;Acc:HGNC:675]34761-2.255-0.1452No
118RIMS2regulating synaptic membrane exocytosis 2 [Source:HGNC Symbol;Acc:HGNC:17283]34810-2.285-0.1319No
119FXYD5FXYD domain containing ion transport regulator 5 [Source:HGNC Symbol;Acc:HGNC:4029]34832-2.300-0.1178No
120ARHGEF6Rac/Cdc42 guanine nucleotide exchange factor 6 [Source:HGNC Symbol;Acc:HGNC:685]35353-2.629-0.1151No
121MCM8minichromosome maintenance 8 homologous recombination repair factor [Source:HGNC Symbol;Acc:HGNC:16147]35598-2.848-0.1035No
122SIPA1signal-induced proliferation-associated 1 [Source:HGNC Symbol;Acc:HGNC:10885]35941-3.116-0.0929No
123TNFSF13BTNF superfamily member 13b [Source:HGNC Symbol;Acc:HGNC:11929]36082-3.256-0.0759No
124FAM13Cfamily with sequence similarity 13 member C [Source:HGNC Symbol;Acc:HGNC:19371]36229-3.423-0.0579No
125DEPDC7DEP domain containing 7 [Source:HGNC Symbol;Acc:HGNC:29899]36722-4.010-0.0456No
126SORBS1sorbin and SH3 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14565]36778-4.092-0.0210No
127GSDMDgasdermin D [Source:HGNC Symbol;Acc:HGNC:25697]36987-4.6070.0028No
Table: GSEA details [plain text format]



Fig 2: IRF2_01   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: IRF2_01: Random ES distribution   
Gene set null distribution of ES for IRF2_01