Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #WT_LPS_versus_WT_NA.Nof1.cls #WT_LPS_versus_WT_NA_repos |
| Phenotype | Nof1.cls#WT_LPS_versus_WT_NA_repos |
| Upregulated in class | WT_LPS |
| GeneSet | GNF2_CDH11 |
| Enrichment Score (ES) | 0.7970782 |
| Normalized Enrichment Score (NES) | 1.6061816 |
| Nominal p-value | 0.007168459 |
| FDR q-value | 0.10874216 |
| FWER p-Value | 0.656 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | FBN1 | fibrillin 1 [Source:HGNC Symbol;Acc:HGNC:3603] | 61 | 4.853 | 0.3091 | Yes |
| 2 | SERPINE1 | serpin family E member 1 [Source:HGNC Symbol;Acc:HGNC:8583] | 227 | 4.065 | 0.5649 | Yes |
| 3 | LAMC1 | laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492] | 987 | 2.355 | 0.6953 | Yes |
| 4 | SERPINH1 | serpin family H member 1 [Source:HGNC Symbol;Acc:HGNC:1546] | 2843 | 0.973 | 0.7075 | Yes |
| 5 | CALU | calumenin [Source:HGNC Symbol;Acc:HGNC:1458] | 2938 | 0.924 | 0.7642 | Yes |
| 6 | GFPT2 | glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242] | 3439 | 0.725 | 0.7971 | Yes |
| 7 | FKBP9 | FKBP prolyl isomerase 9 [Source:HGNC Symbol;Acc:HGNC:3725] | 10000 | 0.000 | 0.6201 | No |
| 8 | COL1A1 | collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197] | 12771 | 0.000 | 0.5454 | No |
| 9 | COL1A2 | collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198] | 12772 | 0.000 | 0.5454 | No |
| 10 | FN1 | fibronectin 1 [Source:HGNC Symbol;Acc:HGNC:3778] | 16655 | 0.000 | 0.4406 | No |
| 11 | COL6A2 | collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212] | 18715 | 0.000 | 0.3851 | No |
| 12 | COL6A1 | collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211] | 18716 | 0.000 | 0.3851 | No |
| 13 | COL3A1 | collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201] | 19651 | 0.000 | 0.3599 | No |
| 14 | LOXL1 | lysyl oxidase like 1 [Source:HGNC Symbol;Acc:HGNC:6665] | 19828 | 0.000 | 0.3551 | No |
| 15 | LOXL2 | lysyl oxidase like 2 [Source:HGNC Symbol;Acc:HGNC:6666] | 19829 | 0.000 | 0.3551 | No |
| 16 | PTX3 | pentraxin 3 [Source:HGNC Symbol;Acc:HGNC:9692] | 20086 | 0.000 | 0.3482 | No |
| 17 | LAMB1 | laminin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6486] | 20773 | 0.000 | 0.3297 | No |
| 18 | SRPX | sushi repeat containing protein X-linked [Source:HGNC Symbol;Acc:HGNC:11309] | 24073 | 0.000 | 0.2407 | No |
| 19 | COL5A1 | collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209] | 25046 | 0.000 | 0.2145 | No |
| 20 | COL5A2 | collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210] | 25047 | 0.000 | 0.2145 | No |
| 21 | FSTL1 | follistatin like 1 [Source:HGNC Symbol;Acc:HGNC:3972] | 26176 | 0.000 | 0.1841 | No |
| 22 | THBS2 | thrombospondin 2 [Source:HGNC Symbol;Acc:HGNC:11786] | 27641 | 0.000 | 0.1446 | No |
| 23 | PXDN | peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966] | 29084 | -0.257 | 0.1221 | No |
| 24 | CDH11 | cadherin 11 [Source:HGNC Symbol;Acc:HGNC:1750] | 30738 | -0.669 | 0.1203 | No |
| 25 | RAI14 | retinoic acid induced 14 [Source:HGNC Symbol;Acc:HGNC:14873] | 31142 | -0.797 | 0.1605 | No |
