Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetGNF2_MCM4
Enrichment Score (ES)-0.8424764
Normalized Enrichment Score (NES)-1.634222
Nominal p-value0.0
FDR q-value0.001702153
FWER p-Value0.021
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_MCM4   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]31470.848-0.0785No
2PA2G4proliferation-associated 2G4 [Source:HGNC Symbol;Acc:HGNC:8550]33310.769-0.0775No
3ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]233600.000-0.6183No
4TCP1t-complex 1 [Source:HGNC Symbol;Acc:HGNC:11655]29475-0.354-0.7806No
5TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]30117-0.515-0.7940No
6CENPMcentromere protein M [Source:HGNC Symbol;Acc:HGNC:18352]31304-0.852-0.8195No
7PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]31440-0.872-0.8165No
8RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]31736-0.972-0.8170No
9GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]32680-1.319-0.8324Yes
10FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]32691-1.323-0.8225Yes
11LMNB1lamin B1 [Source:HGNC Symbol;Acc:HGNC:6637]33093-1.504-0.8219Yes
12RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]33128-1.519-0.8112Yes
13MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]33403-1.555-0.8067Yes
14MCM5minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]33683-1.683-0.8013Yes
15MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34046-1.854-0.7969Yes
16PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34181-1.920-0.7858Yes
17MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]34433-2.054-0.7769Yes
18BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]34617-2.156-0.7654Yes
19NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]34638-2.171-0.7493Yes
20FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]34796-2.278-0.7361Yes
21POLD1DNA polymerase delta 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9175]34800-2.282-0.7187Yes
22MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]34817-2.289-0.7017Yes
23RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]34864-2.323-0.6851Yes
24UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]34921-2.364-0.6686Yes
25GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]34947-2.382-0.6510Yes
26HELLShelicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]35106-2.423-0.6368Yes
27MAD2L1mitotic arrest deficient 2 like 1 [Source:HGNC Symbol;Acc:HGNC:6763]35187-2.501-0.6198Yes
28AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]35217-2.531-0.6012Yes
29SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]35524-2.765-0.5883Yes
30RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35552-2.794-0.5677Yes
31MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]35624-2.879-0.5476Yes
32TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35635-2.889-0.5258Yes
33CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]35792-2.983-0.5072Yes
34CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]35809-2.998-0.4847Yes
35PAICSphosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase [Source:HGNC Symbol;Acc:HGNC:8587]35888-3.059-0.4634Yes
36ASF1Banti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]35936-3.111-0.4408Yes
37MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36017-3.205-0.4185Yes
38KIF14kinesin family member 14 [Source:HGNC Symbol;Acc:HGNC:19181]36034-3.229-0.3942Yes
39CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36104-3.290-0.3709Yes
40RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36132-3.332-0.3462Yes
41AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36135-3.335-0.3207Yes
42KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36211-3.412-0.2966Yes
43KIF18Bkinesin family member 18B [Source:HGNC Symbol;Acc:HGNC:27102]36308-3.499-0.2725Yes
44HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]36309-3.500-0.2457Yes
45BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36332-3.523-0.2193Yes
46RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36345-3.537-0.1926Yes
47FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36503-3.702-0.1685Yes
48ESPL1extra spindle pole bodies like 1, separase [Source:HGNC Symbol;Acc:HGNC:16856]36542-3.776-0.1407Yes
49CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36580-3.830-0.1124Yes
50GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]36625-3.903-0.0837Yes
51NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36726-4.014-0.0557Yes
52TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]36761-4.065-0.0255Yes
53ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36959-4.4970.0035Yes
Table: GSEA details [plain text format]



Fig 2: GNF2_MCM4   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_MCM4: Random ES distribution   
Gene set null distribution of ES for GNF2_MCM4