Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetGNF2_PCNA
Enrichment Score (ES)-0.8371813
Normalized Enrichment Score (NES)-1.7046126
Nominal p-value0.0
FDR q-value1.8111455E-4
FWER p-Value0.001
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_PCNA   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]31470.848-0.0801No
2PA2G4proliferation-associated 2G4 [Source:HGNC Symbol;Acc:HGNC:8550]33310.769-0.0807No
3HNRNPABheterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:HGNC:5034]33370.767-0.0764No
4MT1JPmetallothionein 1J, pseudogene [Source:HGNC Symbol;Acc:HGNC:7402]158110.000-0.4133No
5ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]233600.000-0.6172No
6TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]30117-0.515-0.7967No
7PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]31440-0.872-0.8274No
8HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]31758-0.979-0.8304Yes
9VRK1VRK serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:12718]31834-1.006-0.8266Yes
10SLBPstem-loop binding protein [Source:HGNC Symbol;Acc:HGNC:10904]31894-1.023-0.8224Yes
11CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]32153-1.113-0.8230Yes
12GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]32680-1.319-0.8296Yes
13FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]32691-1.323-0.8223Yes
14RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]33128-1.519-0.8254Yes
15MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]33403-1.555-0.8239Yes
16MCM5minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]33683-1.683-0.8218Yes
17MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34046-1.854-0.8209Yes
18PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34181-1.920-0.8135Yes
19PAXIP1PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]34188-1.925-0.8027Yes
20PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]34248-1.957-0.7931Yes
21NSD2nuclear receptor binding SET domain protein 2 [Source:HGNC Symbol;Acc:HGNC:12766]34280-1.977-0.7826Yes
22MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]34433-2.054-0.7749Yes
23BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]34617-2.156-0.7675Yes
24FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]34796-2.278-0.7593Yes
25TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]34811-2.286-0.7465Yes
26MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]34817-2.289-0.7336Yes
27POLE2DNA polymerase epsilon 2, accessory subunit [Source:HGNC Symbol;Acc:HGNC:9178]34863-2.322-0.7215Yes
28RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]34864-2.323-0.7082Yes
29GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]34947-2.382-0.6967Yes
30SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35054-2.393-0.6859Yes
31RAD54LRAD54 like [Source:HGNC Symbol;Acc:HGNC:9826]35189-2.503-0.6752Yes
32AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]35217-2.531-0.6614Yes
33SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]35524-2.765-0.6538Yes
34RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35552-2.794-0.6385Yes
35PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35620-2.871-0.6239Yes
36MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]35624-2.879-0.6075Yes
37TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35635-2.889-0.5912Yes
38DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35697-2.900-0.5762Yes
39SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]35789-2.981-0.5616Yes
40CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]35792-2.983-0.5446Yes
41CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]35809-2.998-0.5278Yes
42TMPOthymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]35818-3.002-0.5108Yes
43CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]35839-3.018-0.4941Yes
44DNAJC9DnaJ heat shock protein family (Hsp40) member C9 [Source:HGNC Symbol;Acc:HGNC:19123]35848-3.029-0.4770Yes
45DTLdenticleless E3 ubiquitin protein ligase homolog [Source:HGNC Symbol;Acc:HGNC:30288]35985-3.169-0.4625Yes
46MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36017-3.205-0.4449Yes
47CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36104-3.290-0.4284Yes
48RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36132-3.332-0.4101Yes
49KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36211-3.412-0.3926Yes
50BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]36250-3.453-0.3739Yes
51PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36268-3.475-0.3544Yes
52KIF18Bkinesin family member 18B [Source:HGNC Symbol;Acc:HGNC:27102]36308-3.499-0.3354Yes
53HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]36309-3.500-0.3154Yes
54RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36345-3.537-0.2960Yes
55KIF15kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]36462-3.668-0.2782Yes
56MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36500-3.700-0.2580Yes
57FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36503-3.702-0.2368Yes
58ESPL1extra spindle pole bodies like 1, separase [Source:HGNC Symbol;Acc:HGNC:16856]36542-3.776-0.2162Yes
59H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36567-3.812-0.1950Yes
60CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36580-3.830-0.1734Yes
61NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36602-3.862-0.1518Yes
62MYBL2MYB proto-oncogene like 2 [Source:HGNC Symbol;Acc:HGNC:7548]36607-3.868-0.1298Yes
63GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]36625-3.903-0.1079Yes
64NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36726-4.014-0.0876Yes
65TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]36761-4.065-0.0652Yes
66MSH2mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]36776-4.085-0.0422Yes
67CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36884-4.334-0.0202Yes
68ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36959-4.4970.0035Yes
Table: GSEA details [plain text format]



Fig 2: GNF2_PCNA   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_PCNA: Random ES distribution   
Gene set null distribution of ES for GNF2_PCNA