Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetGNF2_SMC4L1
Enrichment Score (ES)-0.80025005
Normalized Enrichment Score (NES)-1.6582894
Nominal p-value0.0
FDR q-value0.0012916651
FWER p-Value0.013
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_SMC4L1   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GAR1GAR1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:14264]29390.923-0.0742No
2CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]31470.848-0.0750No
3EIF2S1eukaryotic translation initiation factor 2 subunit alpha [Source:HGNC Symbol;Acc:HGNC:3265]32710.794-0.0738No
4HNRNPABheterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:HGNC:5034]33370.767-0.0713No
5MRPL35mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]41430.490-0.0903No
6SRSF1serine and arginine rich splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:10780]49370.248-0.1103No
7DKC1dyskerin pseudouridine synthase 1 [Source:HGNC Symbol;Acc:HGNC:2890]50540.214-0.1122No
8DHFRdihydrofolate reductase [Source:HGNC Symbol;Acc:HGNC:2861]55540.153-0.1248No
9ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]233600.000-0.6060No
10NUP153nucleoporin 153 [Source:HGNC Symbol;Acc:HGNC:8062]28273-0.028-0.7385No
11METAP2methionyl aminopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:16672]28588-0.124-0.7463No
12SNRPD1small nuclear ribonucleoprotein D1 polypeptide [Source:HGNC Symbol;Acc:HGNC:11158]28731-0.161-0.7492No
13PCCBpropionyl-CoA carboxylase subunit beta [Source:HGNC Symbol;Acc:HGNC:8654]29012-0.234-0.7555No
14SNRPGsmall nuclear ribonucleoprotein polypeptide G [Source:HGNC Symbol;Acc:HGNC:11163]29402-0.335-0.7641No
15TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]30117-0.515-0.7805No
16SSRP1structure specific recognition protein 1 [Source:HGNC Symbol;Acc:HGNC:11327]30178-0.534-0.7791No
17ANP32Eacidic nuclear phosphoprotein 32 family member E [Source:HGNC Symbol;Acc:HGNC:16673]30578-0.627-0.7863No
18ANP32Bacidic nuclear phosphoprotein 32 family member B [Source:HGNC Symbol;Acc:HGNC:16677]30814-0.684-0.7888No
19SERBP1SERPINE1 mRNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17860]31025-0.752-0.7903No
20SUPT16HSPT16 homolog, facilitates chromatin remodeling subunit [Source:HGNC Symbol;Acc:HGNC:11465]31396-0.859-0.7954Yes
21HAT1histone acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:4821]31438-0.871-0.7916Yes
22PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]31440-0.872-0.7867Yes
23RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]31736-0.972-0.7892Yes
24HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]31758-0.979-0.7842Yes
25COPS3COP9 signalosome subunit 3 [Source:HGNC Symbol;Acc:HGNC:2239]31807-0.992-0.7799Yes
26VRK1VRK serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:12718]31834-1.006-0.7749Yes
27SLBPstem-loop binding protein [Source:HGNC Symbol;Acc:HGNC:10904]31894-1.023-0.7707Yes
28HNRNPA3P1heterogeneous nuclear ribonucleoprotein A3 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:13729]32138-1.107-0.7711Yes
29CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]32153-1.113-0.7651Yes
30EXOSC8exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]32675-1.316-0.7718Yes
31GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]32680-1.319-0.7645Yes
32FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]32691-1.323-0.7573Yes
33RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]33128-1.519-0.7605Yes
34MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]33403-1.555-0.7591Yes
35ZWILCHzwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]33660-1.669-0.7566Yes
36MCM5minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]33683-1.683-0.7477Yes
37MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34046-1.854-0.7470Yes
38PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34181-1.920-0.7397Yes
39PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]34248-1.957-0.7305Yes
40DEKDEK proto-oncogene [Source:HGNC Symbol;Acc:HGNC:2768]34501-2.092-0.7255Yes
41USP1ubiquitin specific peptidase 1 [Source:HGNC Symbol;Acc:HGNC:12607]34506-2.095-0.7137Yes
42BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]34617-2.156-0.7045Yes
43NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]34638-2.171-0.6928Yes
44FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]34796-2.278-0.6842Yes
45MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]34817-2.289-0.6718Yes
46POLE2DNA polymerase epsilon 2, accessory subunit [Source:HGNC Symbol;Acc:HGNC:9178]34863-2.322-0.6599Yes
47RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]34864-2.323-0.6468Yes
48GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]34947-2.382-0.6356Yes
49DTYMKdeoxythymidylate kinase [Source:HGNC Symbol;Acc:HGNC:3061]34952-2.382-0.6222Yes
50SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35054-2.393-0.6114Yes
51AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]35217-2.531-0.6015Yes
52SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]35524-2.765-0.5942Yes
53RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35552-2.794-0.5791Yes
54PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35620-2.871-0.5647Yes
55MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]35624-2.879-0.5485Yes
56TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35635-2.889-0.5325Yes
57DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35697-2.900-0.5178Yes
58SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]35789-2.981-0.5034Yes
59CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]35792-2.983-0.4866Yes
60CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]35809-2.998-0.4701Yes
61TMPOthymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]35818-3.002-0.4534Yes
62DNAJC9DnaJ heat shock protein family (Hsp40) member C9 [Source:HGNC Symbol;Acc:HGNC:19123]35848-3.029-0.4370Yes
63DTLdenticleless E3 ubiquitin protein ligase homolog [Source:HGNC Symbol;Acc:HGNC:30288]35985-3.169-0.4228Yes
64CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36104-3.290-0.4074Yes
65RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36132-3.332-0.3893Yes
66KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36211-3.412-0.3722Yes
67PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36268-3.475-0.3541Yes
68KIF18Bkinesin family member 18B [Source:HGNC Symbol;Acc:HGNC:27102]36308-3.499-0.3353Yes
69HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]36309-3.500-0.3156Yes
70E2F8E2F transcription factor 8 [Source:HGNC Symbol;Acc:HGNC:24727]36385-3.578-0.2974Yes
71CKAP2cytoskeleton associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1990]36464-3.673-0.2788Yes
72FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36503-3.702-0.2589Yes
73CBX3chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553]36526-3.754-0.2383Yes
74H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36567-3.812-0.2178Yes
75CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36580-3.830-0.1965Yes
76NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36602-3.862-0.1753Yes
77GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]36625-3.903-0.1538Yes
78DUTdeoxyuridine triphosphatase [Source:HGNC Symbol;Acc:HGNC:3078]36711-3.993-0.1336Yes
79NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36726-4.014-0.1113Yes
80TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]36761-4.065-0.0893Yes
81MSH2mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]36776-4.085-0.0666Yes
82CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36884-4.334-0.0450Yes
83FBXO5F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]36932-4.442-0.0212Yes
84ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36959-4.4970.0035Yes
Table: GSEA details [plain text format]



Fig 2: GNF2_SMC4L1   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_SMC4L1: Random ES distribution   
Gene set null distribution of ES for GNF2_SMC4L1