Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetBMI1_DN_MEL18_DN.V1_UP
Enrichment Score (ES)0.54772156
Normalized Enrichment Score (NES)1.4161685
Nominal p-value0.0
FDR q-value0.0902247
FWER p-Value0.16
Table: GSEA Results Summary



Fig 1: Enrichment plot: BMI1_DN_MEL18_DN.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1Ainterleukin 1 alpha [Source:HGNC Symbol;Acc:HGNC:5991]114.9840.0272Yes
2LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]154.9810.0546Yes
3VEGFCvascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]254.9630.0817Yes
4FOSL1FOS like 1, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:13718]764.7880.1068Yes
5PMEPA1prostate transmembrane protein, androgen induced 1 [Source:HGNC Symbol;Acc:HGNC:14107]864.7390.1327Yes
6CSF1colony stimulating factor 1 [Source:HGNC Symbol;Acc:HGNC:2432]1504.3820.1551Yes
7ABCA1ATP binding cassette subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:29]1544.3700.1791Yes
8SLC7A11solute carrier family 7 member 11 [Source:HGNC Symbol;Acc:HGNC:11059]1714.2770.2023Yes
9EDN1endothelin 1 [Source:HGNC Symbol;Acc:HGNC:3176]1744.2650.2258Yes
10ITGA5integrin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6141]1924.1930.2484Yes
11ZC3H12Azinc finger CCCH-type containing 12A [Source:HGNC Symbol;Acc:HGNC:26259]2184.1030.2704Yes
12PIM1Pim-1 proto-oncogene, serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:8986]2424.0260.2920Yes
13C3AR1complement C3a receptor 1 [Source:HGNC Symbol;Acc:HGNC:1319]2513.9790.3137Yes
14FAPfibroblast activation protein alpha [Source:HGNC Symbol;Acc:HGNC:3590]3643.5640.3303Yes
15CRISPLD2cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]5153.1670.3438Yes
16GADD45Agrowth arrest and DNA damage inducible alpha [Source:HGNC Symbol;Acc:HGNC:4095]5283.1140.3606Yes
17ATF3activating transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:785]5333.1060.3776Yes
18EHD1EH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:3242]5623.0900.3939Yes
19IL7Rinterleukin 7 receptor [Source:HGNC Symbol;Acc:HGNC:6024]5693.0690.4107Yes
20INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]6032.9900.4263Yes
21PIEZO1piezo type mechanosensitive ion channel component 1 [Source:HGNC Symbol;Acc:HGNC:28993]6092.9770.4426Yes
22CDC42EP2CDC42 effector protein 2 [Source:HGNC Symbol;Acc:HGNC:16263]7402.7160.4540Yes
23TFECtranscription factor EC [Source:HGNC Symbol;Acc:HGNC:11754]7842.6190.4673Yes
24CHST11carbohydrate sulfotransferase 11 [Source:HGNC Symbol;Acc:HGNC:17422]8882.5330.4785Yes
25RUSC2RUN and SH3 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23625]9172.4890.4915Yes
26MT1Fmetallothionein 1F [Source:HGNC Symbol;Acc:HGNC:7398]12402.0160.4939Yes
27SLC7A5solute carrier family 7 member 5 [Source:HGNC Symbol;Acc:HGNC:11063]16361.7190.4927Yes
28TNIP3TNFAIP3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:19315]16961.6460.5001Yes
29NRP2neuropilin 2 [Source:HGNC Symbol;Acc:HGNC:8005]17141.6350.5087Yes
30TRIB3tribbles pseudokinase 3 [Source:HGNC Symbol;Acc:HGNC:16228]17541.6040.5165Yes
31BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]21311.3350.5137Yes
32F3coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]22941.2430.5161Yes
33STC2stanniocalcin 2 [Source:HGNC Symbol;Acc:HGNC:11374]23061.2360.5227Yes
34FJX1four-jointed box kinase 1 [Source:HGNC Symbol;Acc:HGNC:17166]25391.1260.5226Yes
35LCP1lymphocyte cytosolic protein 1 [Source:HGNC Symbol;Acc:HGNC:6528]25471.1210.5286Yes
36APBB2amyloid beta precursor protein binding family B member 2 [Source:HGNC Symbol;Acc:HGNC:582]25821.1020.5337Yes
37PODXLpodocalyxin like [Source:HGNC Symbol;Acc:HGNC:9171]26131.0830.5389Yes
38SLC1A4solute carrier family 1 member 4 [Source:HGNC Symbol;Acc:HGNC:10942]27531.0090.5407Yes
39NKAIN1sodium/potassium transporting ATPase interacting 1 [Source:HGNC Symbol;Acc:HGNC:25743]28740.9560.5427Yes
40SIK1salt inducible kinase 1 [Source:HGNC Symbol;Acc:HGNC:11142]28850.9520.5477Yes
41MICALL1MICAL like 1 [Source:HGNC Symbol;Acc:HGNC:29804]33860.7450.5383No
42KCNN4potassium calcium-activated channel subfamily N member 4 [Source:HGNC Symbol;Acc:HGNC:6293]34160.7330.5416No
43GFPT2glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]34390.7250.5450No
44TNFRSF8TNF receptor superfamily member 8 [Source:HGNC Symbol;Acc:HGNC:11923]36340.6570.5433No
45HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]36530.6510.5464No
46GAB2GRB2 associated binding protein 2 [Source:HGNC Symbol;Acc:HGNC:14458]38170.5990.5453No
47ZEB2zinc finger E-box binding homeobox 2 [Source:HGNC Symbol;Acc:HGNC:14881]40200.5330.5428No
48VEGFAvascular endothelial growth factor A [Source:HGNC Symbol;Acc:HGNC:12680]41900.4720.5408No
49VNN1vanin 1 [Source:HGNC Symbol;Acc:HGNC:12705]48780.2660.5237No
50COL7A1collagen type VII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2214]52360.1610.5149No
51DUSP10dual specificity phosphatase 10 [Source:HGNC Symbol;Acc:HGNC:3065]56580.1510.5044No
52KLF7Kruppel like factor 7 [Source:HGNC Symbol;Acc:HGNC:6350]58120.1000.5008No
53PSAT1phosphoserine aminotransferase 1 [Source:HGNC Symbol;Acc:HGNC:19129]60230.0330.4953No
54KMT2Alysine methyltransferase 2A [Source:HGNC Symbol;Acc:HGNC:7132]61300.0040.4924No
55FGF21fibroblast growth factor 21 [Source:HGNC Symbol;Acc:HGNC:3678]67320.0000.4762No
56ABLIM3actin binding LIM protein family member 3 [Source:HGNC Symbol;Acc:HGNC:29132]68800.0000.4722No
57GREM1gremlin 1, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:2001]81060.0000.4390No
58TNFSF9TNF superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11939]87380.0000.4219No
59MAP3K7CLMAP3K7 C-terminal like [Source:HGNC Symbol;Acc:HGNC:16457]90970.0000.4123No
60VLDLRvery low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:12698]94020.0000.4040No
61TNFRSF9TNF receptor superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11924]96750.0000.3967No
62PLATplasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]98000.0000.3933No
63ADAM19ADAM metallopeptidase domain 19 [Source:HGNC Symbol;Acc:HGNC:197]98110.0000.3930No
64ADAM12ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]98130.0000.3930No
65ADM2adrenomedullin 2 [Source:HGNC Symbol;Acc:HGNC:28898]110570.0000.3594No
66LRRC15leucine rich repeat containing 15 [Source:HGNC Symbol;Acc:HGNC:20818]113320.0000.3520No
67PTHLHparathyroid hormone like hormone [Source:HGNC Symbol;Acc:HGNC:9607]115810.0000.3452No
68TEKTEK receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11724]124690.0000.3212No
69TACR3tachykinin receptor 3 [Source:HGNC Symbol;Acc:HGNC:11528]130940.0000.3043No
70TAGLNtransgelin [Source:HGNC Symbol;Acc:HGNC:11553]137010.0000.2879No
71P2RX5purinergic receptor P2X 5 [Source:HGNC Symbol;Acc:HGNC:8536]140450.0000.2787No
72TNFAIP6TNF alpha induced protein 6 [Source:HGNC Symbol;Acc:HGNC:11898]154130.0000.2417No
73COL13A1collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]154270.0000.2413No
74HTR1D5-hydroxytryptamine receptor 1D [Source:HGNC Symbol;Acc:HGNC:5289]154850.0000.2398No
75COL16A1collagen type XVI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2193]163930.0000.2152No
76TGFB2transforming growth factor beta 2 [Source:HGNC Symbol;Acc:HGNC:11768]165950.0000.2098No
77GALgalanin and GMAP prepropeptide [Source:HGNC Symbol;Acc:HGNC:4114]168350.0000.2033No
78TIMP3TIMP metallopeptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:11822]170720.0000.1969No
79MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]170860.0000.1966No
80CSPG4chondroitin sulfate proteoglycan 4 [Source:HGNC Symbol;Acc:HGNC:2466]171380.0000.1952No
81FAM189A1family with sequence similarity 189 member A1 [Source:HGNC Symbol;Acc:HGNC:29075]172710.0000.1916No
82HAPLN1hyaluronan and proteoglycan link protein 1 [Source:HGNC Symbol;Acc:HGNC:2380]173670.0000.1890No
83MICAMHC class I polypeptide-related sequence A [Source:HGNC Symbol;Acc:HGNC:7090]176360.0000.1818No
84PAPPApappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]178460.0000.1761No
85CDH13cadherin 13 [Source:HGNC Symbol;Acc:HGNC:1753]187180.0000.1526No
86BMP5bone morphogenetic protein 5 [Source:HGNC Symbol;Acc:HGNC:1072]190820.0000.1427No
87MMP7matrix metallopeptidase 7 [Source:HGNC Symbol;Acc:HGNC:7174]191100.0000.1420No
88CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]194680.0000.1323No
89CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]194770.0000.1321No
90ARNTL2aryl hydrocarbon receptor nuclear translocator like 2 [Source:HGNC Symbol;Acc:HGNC:18984]198020.0000.1234No
91TCIMtranscriptional and immune response regulator [Source:HGNC Symbol;Acc:HGNC:1357]198880.0000.1211No
92CPA4carboxypeptidase A4 [Source:HGNC Symbol;Acc:HGNC:15740]205210.0000.1039No
93NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]207020.0000.0991No
94LAMB3laminin subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:6490]207700.0000.0973No
95CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]215760.0000.0755No
96NT5E5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021]217910.0000.0697No
97LSAMPlimbic system associated membrane protein [Source:HGNC Symbol;Acc:HGNC:6705]217960.0000.0696No
98WNT5BWnt family member 5B [Source:HGNC Symbol;Acc:HGNC:16265]218190.0000.0690No
99CLDN1claudin 1 [Source:HGNC Symbol;Acc:HGNC:2032]219250.0000.0661No
100HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]219980.0000.0642No
101PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]227510.0000.0438No
102PLAURplasminogen activator, urokinase receptor [Source:HGNC Symbol;Acc:HGNC:9053]228550.0000.0410No
103ITGB8integrin subunit beta 8 [Source:HGNC Symbol;Acc:HGNC:6163]236340.0000.0200No
104ITGB6integrin subunit beta 6 [Source:HGNC Symbol;Acc:HGNC:6161]236370.0000.0199No
105ITGA3integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]236400.0000.0199No
106PAGE1PAGE family member 1 [Source:HGNC Symbol;Acc:HGNC:4107]237300.0000.0175No
107SCML2Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]249960.000-0.0168No
108INHBEinhibin subunit beta E [Source:HGNC Symbol;Acc:HGNC:24029]250450.000-0.0181No
109KRT75keratin 75 [Source:HGNC Symbol;Acc:HGNC:24431]268690.000-0.0674No
110BST1bone marrow stromal cell antigen 1 [Source:HGNC Symbol;Acc:HGNC:1118]28253-0.023-0.1047No
111SLC19A1solute carrier family 19 member 1 [Source:HGNC Symbol;Acc:HGNC:10937]29079-0.253-0.1256No
112SLC22A4solute carrier family 22 member 4 [Source:HGNC Symbol;Acc:HGNC:10968]29113-0.264-0.1251No
113GDF5growth differentiation factor 5 [Source:HGNC Symbol;Acc:HGNC:4220]29383-0.329-0.1305No
114ANXA3annexin A3 [Source:HGNC Symbol;Acc:HGNC:541]29395-0.333-0.1290No
115ZNF639zinc finger protein 639 [Source:HGNC Symbol;Acc:HGNC:30950]29468-0.353-0.1290No
116KCNN3potassium calcium-activated channel subfamily N member 3 [Source:HGNC Symbol;Acc:HGNC:6292]29989-0.478-0.1405No
117RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]30060-0.500-0.1396No
118STX1Asyntaxin 1A [Source:HGNC Symbol;Acc:HGNC:11433]30170-0.531-0.1396No
119ADGRE5adhesion G protein-coupled receptor E5 [Source:HGNC Symbol;Acc:HGNC:1711]30192-0.538-0.1372No
120PIK3CGphosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma [Source:HGNC Symbol;Acc:HGNC:8978]30585-0.629-0.1444No
121ARL4AADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]30610-0.638-0.1415No
122TRIOtrio Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:12303]30861-0.698-0.1444No
123ASPHaspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757]31270-0.838-0.1508No
124C2CD2C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]31856-1.008-0.1611No
125SLC6A9solute carrier family 6 member 9 [Source:HGNC Symbol;Acc:HGNC:11056]32673-1.316-0.1759No
126TUFT1tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]32857-1.404-0.1731No
127OGFRL1opioid growth factor receptor like 1 [Source:HGNC Symbol;Acc:HGNC:21378]33130-1.520-0.1721No
128C2CD2LC2CD2 like [Source:HGNC Symbol;Acc:HGNC:29000]33741-1.708-0.1792No
129LHFPL2LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]33777-1.722-0.1707No
130CCND1cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]34232-1.946-0.1722No
131JAG1jagged canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:6188]34589-2.143-0.1700No
132FADS3fatty acid desaturase 3 [Source:HGNC Symbol;Acc:HGNC:3576]34652-2.179-0.1597No
133KIF21Bkinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]34711-2.225-0.1490No
134ADGBandroglobin [Source:HGNC Symbol;Acc:HGNC:21212]35035-2.384-0.1446No
135PLEKHO1pleckstrin homology domain containing O1 [Source:HGNC Symbol;Acc:HGNC:24310]35284-2.577-0.1371No
136ARL4CADP ribosylation factor like GTPase 4C [Source:HGNC Symbol;Acc:HGNC:698]35470-2.716-0.1271No
137ADMadrenomedullin [Source:HGNC Symbol;Acc:HGNC:259]35526-2.770-0.1133No
138TMEM51transmembrane protein 51 [Source:HGNC Symbol;Acc:HGNC:25488]36044-3.242-0.1094No
139ITGA4integrin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6140]36545-3.782-0.1021No
140ATP13A2ATPase cation transporting 13A2 [Source:HGNC Symbol;Acc:HGNC:30213]36660-3.936-0.0835No
141CHST3carbohydrate sulfotransferase 3 [Source:HGNC Symbol;Acc:HGNC:1971]36793-4.119-0.0643No
142NAV2neuron navigator 2 [Source:HGNC Symbol;Acc:HGNC:15997]36826-4.178-0.0421No
143WEE1WEE1 G2 checkpoint kinase [Source:HGNC Symbol;Acc:HGNC:12761]36881-4.323-0.0197No
144ADRB2adrenoceptor beta 2 [Source:HGNC Symbol;Acc:HGNC:286]36985-4.6010.0028No
Table: GSEA details [plain text format]



Fig 2: BMI1_DN_MEL18_DN.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: BMI1_DN_MEL18_DN.V1_UP: Random ES distribution   
Gene set null distribution of ES for BMI1_DN_MEL18_DN.V1_UP