Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetCSR_EARLY_UP.V1_UP
Enrichment Score (ES)0.49006796
Normalized Enrichment Score (NES)1.2943982
Nominal p-value0.0
FDR q-value0.09777846
FWER p-Value0.384
Table: GSEA Results Summary



Fig 1: Enrichment plot: CSR_EARLY_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]324.9530.0246Yes
2CSRNP2cysteine and serine rich nuclear protein 2 [Source:HGNC Symbol;Acc:HGNC:16006]1124.5870.0461Yes
3ID3inhibitor of DNA binding 3, HLH protein [Source:HGNC Symbol;Acc:HGNC:5362]1694.2860.0666Yes
4PNPpurine nucleoside phosphorylase [Source:HGNC Symbol;Acc:HGNC:7892]2593.9630.0846Yes
5PTPN12protein tyrosine phosphatase non-receptor type 12 [Source:HGNC Symbol;Acc:HGNC:9645]3693.5490.0999Yes
6DSPdesmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]4113.4200.1164Yes
7CRISPLD2cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]5153.1670.1299Yes
8FZD8frizzled class receptor 8 [Source:HGNC Symbol;Acc:HGNC:4046]5593.0960.1447Yes
9INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]6032.9900.1589Yes
10ST3GAL1ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10862]6372.9200.1730Yes
11ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]6572.8840.1873Yes
12MAP2K3mitogen-activated protein kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6843]6722.8610.2017Yes
13ITPRIPL2ITPRIP like 2 [Source:HGNC Symbol;Acc:HGNC:27257]7092.7710.2150Yes
14BCAR3BCAR3 adaptor protein, NSP family member [Source:HGNC Symbol;Acc:HGNC:973]7532.6920.2276Yes
15RIPK2receptor interacting serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:10020]7782.6360.2406Yes
16FRMD6FERM domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19839]7832.6210.2539Yes
17CD274CD274 molecule [Source:HGNC Symbol;Acc:HGNC:17635]8232.6130.2663Yes
18C21orf91chromosome 21 open reading frame 91 [Source:HGNC Symbol;Acc:HGNC:16459]8642.5700.2785Yes
19NIFKnucleolar protein interacting with the FHA domain of MKI67 [Source:HGNC Symbol;Acc:HGNC:17838]9272.4700.2895Yes
20SMAD7SMAD family member 7 [Source:HGNC Symbol;Acc:HGNC:6773]9392.4450.3018Yes
21KPNA4karyopherin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6397]10222.2960.3114Yes
22TENT4Aterminal nucleotidyltransferase 4A [Source:HGNC Symbol;Acc:HGNC:16705]10232.2910.3232Yes
23RRP9ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]10892.2120.3328Yes
24TNFRSF12ATNF receptor superfamily member 12A [Source:HGNC Symbol;Acc:HGNC:18152]11272.1550.3429Yes
25YWHAGtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma [Source:HGNC Symbol;Acc:HGNC:12852]11392.1430.3536Yes
26USP12ubiquitin specific peptidase 12 [Source:HGNC Symbol;Acc:HGNC:20485]12601.9890.3606Yes
27DNAJA1DnaJ heat shock protein family (Hsp40) member A1 [Source:HGNC Symbol;Acc:HGNC:5229]13591.8880.3676Yes
28TLNRD1talin rod domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13519]13721.8760.3770Yes
29PXNpaxillin [Source:HGNC Symbol;Acc:HGNC:9718]16511.6950.3782Yes
30ADRM1adhesion regulating molecule 1 [Source:HGNC Symbol;Acc:HGNC:15759]16801.6580.3859Yes
31CEMIP2cell migration inducing hyaluronidase 2 [Source:HGNC Symbol;Acc:HGNC:11869]18821.5140.3883Yes
32ACTR3actin related protein 3 [Source:HGNC Symbol;Acc:HGNC:170]19511.4690.3940Yes
33SLC30A1solute carrier family 30 member 1 [Source:HGNC Symbol;Acc:HGNC:11012]19551.4660.4015Yes
34NOP16NOP16 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:26934]20221.4080.4069Yes
35IL11interleukin 11 [Source:HGNC Symbol;Acc:HGNC:5966]21191.3430.4112Yes
36ELOAelongin A [Source:HGNC Symbol;Acc:HGNC:11620]22381.2750.4146Yes
37F3coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]22941.2430.4195Yes
38AMMECR1LAMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]23401.2090.4245Yes
39NIP7nucleolar pre-rRNA processing protein NIP7 [Source:HGNC Symbol;Acc:HGNC:24328]23941.1810.4291Yes
40GTPBP4GTP binding protein 4 [Source:HGNC Symbol;Acc:HGNC:21535]24001.1760.4351Yes
41PPIFpeptidylprolyl isomerase F [Source:HGNC Symbol;Acc:HGNC:9259]24121.1700.4408Yes
42DOT1LDOT1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:24948]25051.1410.4442Yes
43FJX1four-jointed box kinase 1 [Source:HGNC Symbol;Acc:HGNC:17166]25391.1260.4491Yes
44TRMT10CtRNA methyltransferase 10C, mitochondrial RNase P subunit [Source:HGNC Symbol;Acc:HGNC:26022]25991.0880.4531Yes
45PTPN1protein tyrosine phosphatase non-receptor type 1 [Source:HGNC Symbol;Acc:HGNC:9642]26301.0730.4578Yes
46BRPF1bromodomain and PHD finger containing 1 [Source:HGNC Symbol;Acc:HGNC:14255]29670.9110.4534Yes
47SEC24ASEC24 homolog A, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10703]29740.9050.4578Yes
48NMD3NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]30170.8880.4613Yes
49LRRC8Aleucine rich repeat containing 8 VRAC subunit A [Source:HGNC Symbol;Acc:HGNC:19027]30310.8780.4654Yes
50USP36ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]31570.8430.4664Yes
51HMGA1high mobility group AT-hook 1 [Source:HGNC Symbol;Acc:HGNC:5010]31880.8240.4698Yes
52PUM3pumilio RNA binding family member 3 [Source:HGNC Symbol;Acc:HGNC:29676]32360.8100.4727Yes
53PCSK7proprotein convertase subtilisin/kexin type 7 [Source:HGNC Symbol;Acc:HGNC:8748]32700.7940.4759Yes
54C8orf76chromosome 8 open reading frame 76 [Source:HGNC Symbol;Acc:HGNC:25924]34330.7260.4753Yes
55MOB1BMOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]34760.7070.4778Yes
56GNL2G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]35330.6950.4798Yes
57TDGthymine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:11700]36210.6620.4809Yes
58HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]36530.6510.4834Yes
59TOP1DNA topoisomerase I [Source:HGNC Symbol;Acc:HGNC:11986]36700.6440.4863Yes
60RNPS1RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]38130.6000.4855Yes
61UBE2Nubiquitin conjugating enzyme E2 N [Source:HGNC Symbol;Acc:HGNC:12492]39140.5650.4857Yes
62TIMM23translocase of inner mitochondrial membrane 23 [Source:HGNC Symbol;Acc:HGNC:17312]40370.5240.4851Yes
63DHX33DEAH-box helicase 33 [Source:HGNC Symbol;Acc:HGNC:16718]40490.5200.4875Yes
64ZNF800zinc finger protein 800 [Source:HGNC Symbol;Acc:HGNC:27267]40940.5040.4889Yes
65MAPRE1microtubule associated protein RP/EB family member 1 [Source:HGNC Symbol;Acc:HGNC:6890]41810.4760.4890Yes
66GATA2GATA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4171]42540.4450.4893Yes
67RESTRE1 silencing transcription factor [Source:HGNC Symbol;Acc:HGNC:9966]43090.4250.4901Yes
68DDX21DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]45010.3660.4868No
69EIF4A1eukaryotic translation initiation factor 4A1 [Source:HGNC Symbol;Acc:HGNC:3282]45230.3590.4881No
70ELOCelongin C [Source:HGNC Symbol;Acc:HGNC:11617]45630.3500.4888No
71MSANTD3Myb/SANT DNA binding domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23370]46180.3350.4891No
72YOD1YOD1 deubiquitinase [Source:HGNC Symbol;Acc:HGNC:25035]48040.2840.4855No
73PHLPP2PH domain and leucine rich repeat protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:29149]48370.2760.4861No
74TIMM22translocase of inner mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:17317]48690.2690.4866No
75TFGtrafficking from ER to golgi regulator [Source:HGNC Symbol;Acc:HGNC:11758]49520.2440.4857No
76DKC1dyskerin pseudouridine synthase 1 [Source:HGNC Symbol;Acc:HGNC:2890]50540.2140.4840No
77VTA1vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]51150.1970.4834No
78HECTD2HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]51990.1710.4820No
79EMC6ER membrane protein complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:28430]57050.1360.4691No
80DNTTIP2deoxynucleotidyltransferase terminal interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:24013]57290.1270.4691No
81EHD4EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]58090.1010.4675No
82THAP12THAP domain containing 12 [Source:HGNC Symbol;Acc:HGNC:9440]59470.0580.4641No
83EIF4A3eukaryotic translation initiation factor 4A3 [Source:HGNC Symbol;Acc:HGNC:18683]60190.0340.4623No
84DCBLD1discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]120610.0000.2988No
85DDIT4LDNA damage inducible transcript 4 like [Source:HGNC Symbol;Acc:HGNC:30555]133040.0000.2652No
86TMEM200Atransmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]162560.0000.1853No
87DLX2distal-less homeobox 2 [Source:HGNC Symbol;Acc:HGNC:2915]167090.0000.1730No
88GALgalanin and GMAP prepropeptide [Source:HGNC Symbol;Acc:HGNC:4114]168350.0000.1697No
89BDKRB1bradykinin receptor B1 [Source:HGNC Symbol;Acc:HGNC:1029]179370.0000.1398No
90TBX2T-box transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11597]197480.0000.0908No
91FOXD1forkhead box D1 [Source:HGNC Symbol;Acc:HGNC:3802]206690.0000.0659No
92NT5E5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021]217910.0000.0356No
93PLAURplasminogen activator, urokinase receptor [Source:HGNC Symbol;Acc:HGNC:9053]228550.0000.0068No
94PLCH1phospholipase C eta 1 [Source:HGNC Symbol;Acc:HGNC:29185]232330.000-0.0034No
95SLC28A1solute carrier family 28 member 1 [Source:HGNC Symbol;Acc:HGNC:11001]232790.000-0.0046No
96SOX9SRY-box transcription factor 9 [Source:HGNC Symbol;Acc:HGNC:11204]233370.000-0.0062No
97SPRY4sprouty RTK signaling antagonist 4 [Source:HGNC Symbol;Acc:HGNC:15533]255160.000-0.0651No
98CD33CD33 molecule [Source:HGNC Symbol;Acc:HGNC:1659]279410.000-0.1307No
99MYO9Bmyosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]28187-0.004-0.1373No
100SREK1IP1SREK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26716]28244-0.020-0.1388No
101NCLnucleolin [Source:HGNC Symbol;Acc:HGNC:7667]28262-0.026-0.1391No
102NUP54nucleoporin 54 [Source:HGNC Symbol;Acc:HGNC:17359]28272-0.028-0.1392No
103RGMBrepulsive guidance molecule BMP co-receptor b [Source:HGNC Symbol;Acc:HGNC:26896]28285-0.031-0.1394No
104CHUKcomponent of inhibitor of nuclear factor kappa B kinase complex [Source:HGNC Symbol;Acc:HGNC:1974]28325-0.043-0.1402No
105SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]28363-0.054-0.1409No
106CBFBcore-binding factor subunit beta [Source:HGNC Symbol;Acc:HGNC:1539]28388-0.063-0.1412No
107ILF2interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]28539-0.106-0.1448No
108DIS3DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]28587-0.124-0.1454No
109ELLelongation factor for RNA polymerase II [Source:HGNC Symbol;Acc:HGNC:23114]28865-0.202-0.1518No
110PHF20L1PHD finger protein 20 like 1 [Source:HGNC Symbol;Acc:HGNC:24280]28974-0.231-0.1536No
111HPCAL1hippocalcin like 1 [Source:HGNC Symbol;Acc:HGNC:5145]29075-0.252-0.1550No
112PHLDB1pleckstrin homology like domain family B member 1 [Source:HGNC Symbol;Acc:HGNC:23697]29123-0.266-0.1549No
113B3GNT6UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:24141]29307-0.313-0.1582No
114ZNF697zinc finger protein 697 [Source:HGNC Symbol;Acc:HGNC:32034]29820-0.434-0.1699No
115STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]29896-0.453-0.1696No
116SRP72signal recognition particle 72 [Source:HGNC Symbol;Acc:HGNC:11303]29941-0.466-0.1684No
117VGLL4vestigial like family member 4 [Source:HGNC Symbol;Acc:HGNC:28966]29982-0.473-0.1670No
118UTP3UTP3 small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24477]30008-0.484-0.1652No
119CCDC59coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]30091-0.509-0.1648No
120ATG101autophagy related 101 [Source:HGNC Symbol;Acc:HGNC:25679]30357-0.568-0.1690No
121AMD1adenosylmethionine decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:457]30446-0.591-0.1684No
122PTP4A1protein tyrosine phosphatase 4A1 [Source:HGNC Symbol;Acc:HGNC:9634]30491-0.604-0.1665No
123ZBTB2zinc finger and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:20868]31026-0.752-0.1770No
124GABPB2GA binding protein transcription factor subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:28441]31071-0.774-0.1743No
125POLE3DNA polymerase epsilon 3, accessory subunit [Source:HGNC Symbol;Acc:HGNC:13546]31100-0.781-0.1710No
126IRAK1interleukin 1 receptor associated kinase 1 [Source:HGNC Symbol;Acc:HGNC:6112]31124-0.791-0.1675No
127RFKriboflavin kinase [Source:HGNC Symbol;Acc:HGNC:30324]31253-0.834-0.1667No
128SNAI1snail family transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:11128]31398-0.859-0.1662No
129TXNDC12thioredoxin domain containing 12 [Source:HGNC Symbol;Acc:HGNC:24626]31922-1.032-0.1751No
130SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]32829-1.385-0.1925No
131SLC16A1solute carrier family 16 member 1 [Source:HGNC Symbol;Acc:HGNC:10922]33095-1.505-0.1919No
132HLXH2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]33129-1.520-0.1850No
133NRIP1nuclear receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8001]33387-1.551-0.1839No
134CTPS1CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]33464-1.583-0.1779No
135KLF13Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672]33505-1.604-0.1707No
136ZPBPzona pellucida binding protein [Source:HGNC Symbol;Acc:HGNC:15662]33754-1.711-0.1686No
137UAP1UDP-N-acetylglucosamine pyrophosphorylase 1 [Source:HGNC Symbol;Acc:HGNC:12457]33942-1.799-0.1644No
138UGDHUDP-glucose 6-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:12525]34032-1.843-0.1573No
139POM121POM121 transmembrane nucleoporin [Source:HGNC Symbol;Acc:HGNC:19702]34344-2.016-0.1554No
140PANX1pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]34413-2.044-0.1467No
141FAM107Bfamily with sequence similarity 107 member B [Source:HGNC Symbol;Acc:HGNC:23726]34757-2.251-0.1444No
142MRPS35mitochondrial ribosomal protein S35 [Source:HGNC Symbol;Acc:HGNC:16635]34953-2.382-0.1374No
143NET1neuroepithelial cell transforming 1 [Source:HGNC Symbol;Acc:HGNC:14592]35114-2.429-0.1293No
144ZNF324zinc finger protein 324 [Source:HGNC Symbol;Acc:HGNC:14096]35649-2.900-0.1288No
145ELK3ETS transcription factor ELK3 [Source:HGNC Symbol;Acc:HGNC:3325]35920-3.090-0.1202No
146SLC37A4solute carrier family 37 member 4 [Source:HGNC Symbol;Acc:HGNC:4061]36572-3.824-0.1182No
147KLF10Kruppel like factor 10 [Source:HGNC Symbol;Acc:HGNC:11810]36608-3.870-0.0992No
148ZBTB12zinc finger and BTB domain containing 12 [Source:HGNC Symbol;Acc:HGNC:19066]36764-4.068-0.0825No
149SCHIP1schwannomin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:15678]36810-4.135-0.0624No
150SHBSH2 domain containing adaptor protein B [Source:HGNC Symbol;Acc:HGNC:10838]36925-4.429-0.0427No
151BCAR1BCAR1 scaffold protein, Cas family member [Source:HGNC Symbol;Acc:HGNC:971]36944-4.467-0.0202No
152SMTNsmoothelin [Source:HGNC Symbol;Acc:HGNC:11126]37014-4.6890.0021No
Table: GSEA details [plain text format]



Fig 2: CSR_EARLY_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CSR_EARLY_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for CSR_EARLY_UP.V1_UP